RNA–Protein interactions for RNA: ENST00000287936.8

HMGCR-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCR, Length 4,585 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-201ENST00000287936 Q6ZS49 121 aa8.61□□□□□ -1.03
HMGCR-201ENST00000287936 VASH2Q86V25 355 aa8.61□□□□□ -1.03
HMGCR-201ENST00000287936 EDARADDQ8WWZ3 215 aa8.61□□□□□ -1.03
HMGCR-201ENST00000287936 SH3BGRL3Q9H299 93 aa8.61□□□□□ -1.03
HMGCR-201ENST00000287936 MTCH1Q9NZJ7 389 aa8.61□□□□□ -1.03
HMGCR-201ENST00000287936 LIPGQ9Y5X9 500 aa8.61□□□□□ -1.03
HMGCR-201ENST00000287936 LY86O95711 162 aa8.6□□□□□ -1.03
HMGCR-201ENST00000287936 CELA3AP09093 270 aa8.6□□□□□ -1.03
HMGCR-201ENST00000287936 SLC38A11Q08AI6 406 aa8.6□□□□□ -1.03
HMGCR-201ENST00000287936 ATP6V1FQ16864 119 aa8.6□□□□□ -1.03
HMGCR-201ENST00000287936 CXXC4Q9H2H0 198 aa8.6□□□□□ -1.03
HMGCR-201ENST00000287936 ZNF552Q9H707 407 aaPredicted RBP8.6□□□□□ -1.03
HMGCR-201ENST00000287936 FOXJ2Q9P0K8 574 aa8.6□□□□□ -1.03
HMGCR-201ENST00000287936 COL5A1P20908 1838 aaPredicted RBP8.6□□□□□ -1.03
HMGCR-201ENST00000287936 SDK2Q58EX2 2172 aa8.6□□□□□ -1.03
HMGCR-201ENST00000287936 IGSF23A1L1A6 192 aa8.6□□□□□ -1.03
HMGCR-201ENST00000287936 ZNF98A6NK75 572 aa8.6□□□□□ -1.03
HMGCR-201ENST00000287936 HAND1O96004 215 aa8.6□□□□□ -1.03
HMGCR-201ENST00000287936 CBR1P16152 277 aa8.6□□□□□ -1.03
HMGCR-201ENST00000287936 KHDC3LQ587J8 217 aa8.6□□□□□ -1.03
HMGCR-201ENST00000287936 DMBX1Q8NFW5 382 aa8.6□□□□□ -1.03
HMGCR-201ENST00000287936 LSM10Q969L4 123 aaKnown RBP8.6□□□□□ -1.03
HMGCR-201ENST00000287936 POM121L2Q96KW2 1035 aa8.6□□□□□ -1.03
HMGCR-201ENST00000287936 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.6□□□□□ -1.03
HMGCR-201ENST00000287936 PROCRQ9UNN8 238 aa8.6□□□□□ -1.03
HMGCR-201ENST00000287936 TRAV17A0A0B4J275 112 aa8.6□□□□□ -1.03
HMGCR-201ENST00000287936 A0A1W2PPV4 95 aa8.6□□□□□ -1.03
HMGCR-201ENST00000287936 M0R296 226 aa8.6□□□□□ -1.03
HMGCR-201ENST00000287936 CYB5BO43169 146 aa8.6□□□□□ -1.03
HMGCR-201ENST00000287936 METTL15P1P0C7V9 234 aa8.6□□□□□ -1.03
HMGCR-201ENST00000287936 RAB31Q13636 194 aa8.6□□□□□ -1.03
HMGCR-201ENST00000287936 MST1LQ2TV78 715 aa8.6□□□□□ -1.03
HMGCR-201ENST00000287936 OR4A16Q8NH70 328 aa8.6□□□□□ -1.03
HMGCR-201ENST00000287936 GPR146Q96CH1 333 aa8.6□□□□□ -1.03
HMGCR-201ENST00000287936 ACTR3CQ9C0K3 210 aaPredicted RBP8.6□□□□□ -1.03
HMGCR-201ENST00000287936 PRDM6Q9NQX0 595 aa8.6□□□□□ -1.03
HMGCR-201ENST00000287936 UFSP2Q9NUQ7 469 aa8.6□□□□□ -1.03
HMGCR-201ENST00000287936 IGHV3-64DA0A0J9YX35 117 aa8.59□□□□□ -1.03
HMGCR-201ENST00000287936 CDIPTO14735 213 aa8.59□□□□□ -1.03
HMGCR-201ENST00000287936 NEURL1O76050 574 aa8.59□□□□□ -1.03
HMGCR-201ENST00000287936 SLC25A6P12236 298 aa8.59□□□□□ -1.03
HMGCR-201ENST00000287936 CD82P27701 267 aa8.59□□□□□ -1.03
HMGCR-201ENST00000287936 PNRC1Q12796 327 aaPredicted RBP8.59□□□□□ -1.03
HMGCR-201ENST00000287936 SLC25A40Q8TBP6 338 aa8.59□□□□□ -1.03
HMGCR-201ENST00000287936 IFT22Q9H7X7 185 aa8.59□□□□□ -1.03
HMGCR-201ENST00000287936 OOEPA6NGQ2 149 aa8.59□□□□□ -1.03
HMGCR-201ENST00000287936 ZNF727A8MUV8 499 aa8.59□□□□□ -1.03
HMGCR-201ENST00000287936 VSTM5A8MXK1 200 aa8.59□□□□□ -1.03
HMGCR-201ENST00000287936 LYZL6O75951 148 aa8.59□□□□□ -1.03
HMGCR-201ENST00000287936 COX5AP20674 150 aa8.59□□□□□ -1.03
HMGCR-201ENST00000287936 PPP1CCP36873 323 aaKnown RBP8.59□□□□□ -1.03
HMGCR-201ENST00000287936 OR3A1P47881 315 aa8.59□□□□□ -1.03
HMGCR-201ENST00000287936 NDUFA6P56556 154 aa8.59□□□□□ -1.03
HMGCR-201ENST00000287936 UBALD1Q8TB05 177 aa8.59□□□□□ -1.03
HMGCR-201ENST00000287936 ISOC2Q96AB3 205 aa8.59□□□□□ -1.03
HMGCR-201ENST00000287936 SIRT7Q9NRC8 400 aa8.59□□□□□ -1.03
HMGCR-201ENST00000287936 KCNIP2Q9NS61 270 aa8.59□□□□□ -1.03
HMGCR-201ENST00000287936 PCNX3Q9H6A9 2034 aa8.59□□□□□ -1.03
HMGCR-201ENST00000287936 UBE2L5PA0A1B0GUS4 154 aa8.59□□□□□ -1.03
HMGCR-201ENST00000287936 B4DEV8 164 aa8.59□□□□□ -1.03
HMGCR-201ENST00000287936 HSPB1P04792 205 aaKnown RBP8.59□□□□□ -1.03
HMGCR-201ENST00000287936 IRF2P14316 349 aa8.59□□□□□ -1.03
HMGCR-201ENST00000287936 ADCYAP1P18509 176 aa8.59□□□□□ -1.03
HMGCR-201ENST00000287936 NOVA1P51513 510 aaKnown RBP8.59□□□□□ -1.03
HMGCR-201ENST00000287936 OR2B11Q5JQS5 317 aa8.59□□□□□ -1.03
HMGCR-201ENST00000287936 H1FOOQ8IZA3 346 aaPredicted RBP8.59□□□□□ -1.03
HMGCR-201ENST00000287936 MUCL1Q96DR8 90 aa8.59□□□□□ -1.03
HMGCR-201ENST00000287936 HIPK2Q9H2X6 1198 aa8.59□□□□□ -1.03
HMGCR-201ENST00000287936 URGCP-MRPS24S4R325 110 aa8.59□□□□□ -1.03
HMGCR-201ENST00000287936 A0A1W2PR80 420 aa8.59□□□□□ -1.03
HMGCR-201ENST00000287936 OR2H2O95918 312 aa8.59□□□□□ -1.03
HMGCR-201ENST00000287936 DAOP14920 347 aa8.59□□□□□ -1.03
HMGCR-201ENST00000287936 GPR12P47775 334 aa8.59□□□□□ -1.03
HMGCR-201ENST00000287936 FHITP49789 147 aa8.59□□□□□ -1.03
HMGCR-201ENST00000287936 EDDM3AQ14507 147 aa8.59□□□□□ -1.03
HMGCR-201ENST00000287936 MRPL30Q8TCC3 161 aaKnown RBP8.59□□□□□ -1.03
HMGCR-201ENST00000287936 HPSE2Q8WWQ2 592 aa8.59□□□□□ -1.03
HMGCR-201ENST00000287936 OR2J1Q9GZK6 312 aa8.59□□□□□ -1.03
HMGCR-201ENST00000287936 OR2D2Q9H210 308 aa8.59□□□□□ -1.03
HMGCR-201ENST00000287936 MAP1LC3B2A6NCE7 125 aa8.58□□□□□ -1.04
HMGCR-201ENST00000287936 C9orf172C9J069 976 aa8.58□□□□□ -1.04
HMGCR-201ENST00000287936 H3BQ15 152 aa8.58□□□□□ -1.04
HMGCR-201ENST00000287936 NAPSAO96009 420 aa8.58□□□□□ -1.04
HMGCR-201ENST00000287936 ARG1P05089 322 aa8.58□□□□□ -1.04
HMGCR-201ENST00000287936 HOXB1P14653 301 aaPredicted RBP8.58□□□□□ -1.04
HMGCR-201ENST00000287936 TNFSF4P23510 183 aa8.58□□□□□ -1.04
HMGCR-201ENST00000287936 ZNF816Q0VGE8 651 aaPredicted RBP8.58□□□□□ -1.04
HMGCR-201ENST00000287936 LTC4SQ16873 150 aa8.58□□□□□ -1.04
HMGCR-201ENST00000287936 PDLIM3Q53GG5 364 aaPredicted RBP8.58□□□□□ -1.04
HMGCR-201ENST00000287936 C10orf91Q5T1B1 145 aa8.58□□□□□ -1.04
HMGCR-201ENST00000287936 GCNT2Q8N0V5 402 aa8.58□□□□□ -1.04
HMGCR-201ENST00000287936 MAP1LC3BQ9GZQ8 125 aa8.58□□□□□ -1.04
HMGCR-201ENST00000287936 WFDC1Q9HC57 220 aa8.58□□□□□ -1.04
HMGCR-201ENST00000287936 A0A1W2PPE2 198 aa8.58□□□□□ -1.04
HMGCR-201ENST00000287936 PPP1R2P9O14990 202 aa8.58□□□□□ -1.04
HMGCR-201ENST00000287936 KRASP01116 189 aa8.58□□□□□ -1.04
HMGCR-201ENST00000287936 SMIM6P0DI80 62 aa8.58□□□□□ -1.04
HMGCR-201ENST00000287936 SERF2P84101 59 aa8.58□□□□□ -1.04
HMGCR-201ENST00000287936 ADIRFQ15847 76 aa8.58□□□□□ -1.04
HMGCR-201ENST00000287936 COLCA1Q6ZS62 124 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms