RNA–Protein interactions for RNA: ENST00000286749.3

SLC28A1-201, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,636 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-201ENST00000286749 SERPINE2P07093 398 aa11.29□□□□□ -0.6
SLC28A1-201ENST00000286749 CD200P41217 278 aa11.29□□□□□ -0.6
SLC28A1-201ENST00000286749 FOXG1P55316 489 aaPredicted RBP11.29□□□□□ -0.6
SLC28A1-201ENST00000286749 GFI1BQ5VTD9 330 aa11.29□□□□□ -0.6
SLC28A1-201ENST00000286749 RDH5Q92781 318 aa11.29□□□□□ -0.6
SLC28A1-201ENST00000286749 PRRG4Q9BZD6 226 aa11.29□□□□□ -0.6
SLC28A1-201ENST00000286749 HIPK2Q9H2X6 1198 aa11.29□□□□□ -0.6
SLC28A1-201ENST00000286749 ZNF552Q9H707 407 aaPredicted RBP11.29□□□□□ -0.6
SLC28A1-201ENST00000286749 VSIRQ9H7M9 311 aa11.29□□□□□ -0.6
SLC28A1-201ENST00000286749 TRAV1-1A0A0B4J248 108 aa11.29□□□□□ -0.6
SLC28A1-201ENST00000286749 ZNF503-AS2A6NEH8 195 aa11.29□□□□□ -0.6
SLC28A1-201ENST00000286749 KIAA1324LA8MWY0 1029 aaPredicted RBP11.29□□□□□ -0.6
SLC28A1-201ENST00000286749 SRYQ05066 204 aa11.29□□□□□ -0.6
SLC28A1-201ENST00000286749 PDZD11Q5EBL8 140 aa11.29□□□□□ -0.6
SLC28A1-201ENST00000286749 FAM90A2PQ658T7 463 aa11.29□□□□□ -0.6
SLC28A1-201ENST00000286749 ZNF324BQ6AW86 544 aaPredicted RBP11.29□□□□□ -0.6
SLC28A1-201ENST00000286749 LCN15Q6UWW0 184 aa11.29□□□□□ -0.6
SLC28A1-201ENST00000286749 Q6ZRM9 215 aa11.29□□□□□ -0.6
SLC28A1-201ENST00000286749 PPP1R32Q7Z5V6 425 aa11.29□□□□□ -0.6
SLC28A1-201ENST00000286749 OR10J5Q8NHC4 309 aa11.29□□□□□ -0.6
SLC28A1-201ENST00000286749 ZNF665Q9H7R5 613 aa11.29□□□□□ -0.6
SLC28A1-201ENST00000286749 PRDM6Q9NQX0 595 aa11.29□□□□□ -0.6
SLC28A1-201ENST00000286749 RPRMQ9NS64 109 aa11.29□□□□□ -0.6
SLC28A1-201ENST00000286749 ERRFI1Q9UJM3 462 aaPredicted RBP11.29□□□□□ -0.6
SLC28A1-201ENST00000286749 OR2W1Q9Y3N9 320 aa11.29□□□□□ -0.6
SLC28A1-201ENST00000286749 FREM2Q5SZK8 3169 aa11.29□□□□□ -0.6
SLC28A1-201ENST00000286749 A0A1B0GU03 582 aa11.28□□□□□ -0.6
SLC28A1-201ENST00000286749 NGFP01138 241 aa11.28□□□□□ -0.6
SLC28A1-201ENST00000286749 S100GP29377 79 aa11.28□□□□□ -0.6
SLC28A1-201ENST00000286749 FGF8P55075 233 aaPredicted RBP11.28□□□□□ -0.6
SLC28A1-201ENST00000286749 GFRA1P56159 465 aa11.28□□□□□ -0.6
SLC28A1-201ENST00000286749 RNPS1Q15287 305 aaKnown RBP11.28□□□□□ -0.6
SLC28A1-201ENST00000286749 ZNF787Q6DD87 383 aa11.28□□□□□ -0.6
SLC28A1-201ENST00000286749 H1FOOQ8IZA3 346 aaPredicted RBP11.28□□□□□ -0.6
SLC28A1-201ENST00000286749 ZNF383Q8NA42 475 aa11.28□□□□□ -0.6
SLC28A1-201ENST00000286749 OR10D4PQ8NGN7 298 aa11.28□□□□□ -0.6
SLC28A1-201ENST00000286749 TMEM45BQ96B21 275 aa11.28□□□□□ -0.6
SLC28A1-201ENST00000286749 PILRBQ9UKJ0 227 aa11.28□□□□□ -0.6
SLC28A1-201ENST00000286749 CNOT4O95628 575 aaKnown RBP11.28□□□□□ -0.6
SLC28A1-201ENST00000286749 SOD3P08294 240 aa11.28□□□□□ -0.6
SLC28A1-201ENST00000286749 IAPPP10997 89 aa11.28□□□□□ -0.6
SLC28A1-201ENST00000286749 NKX6-1P78426 367 aaPredicted RBP11.28□□□□□ -0.6
SLC28A1-201ENST00000286749 SSX7Q7RTT5 188 aa11.28□□□□□ -0.6
SLC28A1-201ENST00000286749 OR10G4Q8NGN3 311 aa11.28□□□□□ -0.6
SLC28A1-201ENST00000286749 SCGB1C1Q8TD33 95 aa11.28□□□□□ -0.6
SLC28A1-201ENST00000286749 IL1F10Q8WWZ1 152 aa11.28□□□□□ -0.6
SLC28A1-201ENST00000286749 PSMF1Q92530 271 aa11.28□□□□□ -0.6
SLC28A1-201ENST00000286749 RAB40CQ96S21 281 aa11.28□□□□□ -0.6
SLC28A1-201ENST00000286749 GPR61Q9BZJ8 451 aa11.28□□□□□ -0.6
SLC28A1-201ENST00000286749 CACNG5Q9UF02 275 aa11.28□□□□□ -0.6
SLC28A1-201ENST00000286749 SEC14L6B5MCN3 397 aa11.27□□□□□ -0.6
SLC28A1-201ENST00000286749 METTL15P1P0C7V9 234 aa11.27□□□□□ -0.6
SLC28A1-201ENST00000286749 BCL2P10415 239 aa11.27□□□□□ -0.6
SLC28A1-201ENST00000286749 ARL16Q0P5N6 197 aa11.27□□□□□ -0.6
SLC28A1-201ENST00000286749 ZNF726P1Q15940 193 aa11.27□□□□□ -0.6
SLC28A1-201ENST00000286749 NRN1LQ496H8 165 aa11.27□□□□□ -0.6
SLC28A1-201ENST00000286749 FAM180AQ6UWF9 173 aa11.27□□□□□ -0.6
SLC28A1-201ENST00000286749 C17orf78Q8N4C9 275 aa11.27□□□□□ -0.6
SLC28A1-201ENST00000286749 APOBEC3DQ96AK3 386 aaPredicted RBP11.27□□□□□ -0.6
SLC28A1-201ENST00000286749 PFDN5Q99471 154 aa11.27□□□□□ -0.6
SLC28A1-201ENST00000286749 OR1A1Q9P1Q5 309 aa11.27□□□□□ -0.6
SLC28A1-201ENST00000286749 DOCK7Q96N67 2140 aa11.27□□□□□ -0.6
SLC28A1-201ENST00000286749 TRAV24A0A0B4J272 114 aa11.27□□□□□ -0.61
SLC28A1-201ENST00000286749 ZNF729A6NN14 1252 aaPredicted RBP11.27□□□□□ -0.61
SLC28A1-201ENST00000286749 B4DEV8 164 aa11.27□□□□□ -0.61
SLC28A1-201ENST00000286749 NTN3O00634 580 aaPredicted RBP11.27□□□□□ -0.61
SLC28A1-201ENST00000286749 PPP1R2P9O14990 202 aa11.27□□□□□ -0.61
SLC28A1-201ENST00000286749 IGKV1-39P01597 117 aa11.27□□□□□ -0.61
SLC28A1-201ENST00000286749 IGKV1D-39P04432 117 aa11.27□□□□□ -0.61
SLC28A1-201ENST00000286749 ZFP36L1Q07352 338 aaKnown RBP11.27□□□□□ -0.61
SLC28A1-201ENST00000286749 FAM210BQ96KR6 192 aa11.27□□□□□ -0.61
SLC28A1-201ENST00000286749 HIST1H2AAQ96QV6 131 aa11.27□□□□□ -0.61
SLC28A1-201ENST00000286749 RIMS4Q9H426 269 aaPredicted RBP11.27□□□□□ -0.61
SLC28A1-201ENST00000286749 CISD1Q9NZ45 108 aaKnown RBP11.27□□□□□ -0.61
SLC28A1-201ENST00000286749 TREM2Q9NZC2 230 aa11.27□□□□□ -0.61
SLC28A1-201ENST00000286749 DIDO1Q9BTC0 2240 aaKnown RBP11.27□□□□□ -0.61
SLC28A1-201ENST00000286749 TRAV39A0A0B4J263 110 aa11.26□□□□□ -0.61
SLC28A1-201ENST00000286749 LILRA1O75019 489 aa11.26□□□□□ -0.61
SLC28A1-201ENST00000286749 TRGC1P0CF51 173 aa11.26□□□□□ -0.61
SLC28A1-201ENST00000286749 PMS2CLQ68D20 193 aa11.26□□□□□ -0.61
SLC28A1-201ENST00000286749 OR2T2Q6IF00 324 aa11.26□□□□□ -0.61
SLC28A1-201ENST00000286749 TUSC5Q8IXB3 177 aa11.26□□□□□ -0.61
SLC28A1-201ENST00000286749 C1orf87Q8N0U7 546 aa11.26□□□□□ -0.61
SLC28A1-201ENST00000286749 HIST3H2BBQ8N257 126 aa11.26□□□□□ -0.61
SLC28A1-201ENST00000286749 OR5A2Q8NGI9 324 aa11.26□□□□□ -0.61
SLC28A1-201ENST00000286749 FRZBQ92765 325 aa11.26□□□□□ -0.61
SLC28A1-201ENST00000286749 PCSK5Q92824 1860 aa11.26□□□□□ -0.61
SLC28A1-201ENST00000286749 ARGFXA6NJG6 315 aa11.26□□□□□ -0.61
SLC28A1-201ENST00000286749 GATCO43716 136 aaKnown RBP11.26□□□□□ -0.61
SLC28A1-201ENST00000286749 SYNGR2O43760 224 aa11.26□□□□□ -0.61
SLC28A1-201ENST00000286749 SLC25A6P12236 298 aa11.26□□□□□ -0.61
SLC28A1-201ENST00000286749 CYB561P49447 251 aa11.26□□□□□ -0.61
SLC28A1-201ENST00000286749 ZNF525Q8N782 197 aa11.26□□□□□ -0.61
SLC28A1-201ENST00000286749 OR13D1Q8NGV5 346 aa11.26□□□□□ -0.61
SLC28A1-201ENST00000286749 ABHD5Q8WTS1 349 aa11.26□□□□□ -0.61
SLC28A1-201ENST00000286749 PSENENQ9NZ42 101 aa11.26□□□□□ -0.61
SLC28A1-201ENST00000286749 SIT1Q9Y3P8 196 aa11.26□□□□□ -0.61
SLC28A1-201ENST00000286749 KIAA2026Q5HYC2 2103 aa11.26□□□□□ -0.61
SLC28A1-201ENST00000286749 MED12LQ86YW9 2145 aa11.26□□□□□ -0.61
SLC28A1-201ENST00000286749 IGKV3D-15A0A087WSY6 115 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms