RNA–Protein interactions for RNA: ENST00000275954.3

TMEM47-201, Transcript of transmembrane protein 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM47, Length 4,054 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM47-201ENST00000275954 DEPPQ9NTK1 212 aa12.37□□□□□ -0.43
TMEM47-201ENST00000275954 NUDT19A8MXV4 375 aa12.36□□□□□ -0.43
TMEM47-201ENST00000275954 S1PR3Q99500 378 aa12.36□□□□□ -0.43
TMEM47-201ENST00000275954 WSB1Q9Y6I7 421 aa12.36□□□□□ -0.43
TMEM47-201ENST00000275954 USP9XQ93008 2570 aaPredicted RBP12.36□□□□□ -0.43
TMEM47-201ENST00000275954 C17orf112F2Z3M2 114 aa12.36□□□□□ -0.43
TMEM47-201ENST00000275954 J3QT63 122 aa12.36□□□□□ -0.43
TMEM47-201ENST00000275954 IL13RA2Q14627 380 aa12.36□□□□□ -0.43
TMEM47-201ENST00000275954 C10orf128Q5T292 105 aa12.36□□□□□ -0.43
TMEM47-201ENST00000275954 ZNF552Q9H707 407 aaPredicted RBP12.36□□□□□ -0.43
TMEM47-201ENST00000275954 RPL36A-HNRNPH2H7BZ11 118 aa12.36□□□□□ -0.43
TMEM47-201ENST00000275954 PSG2P11465 335 aa12.36□□□□□ -0.43
TMEM47-201ENST00000275954 DVL1P1P54792 670 aaPredicted RBP12.36□□□□□ -0.43
TMEM47-201ENST00000275954 RIPPLY2Q5TAB7 128 aa12.36□□□□□ -0.43
TMEM47-201ENST00000275954 UQCC3Q6UW78 93 aa12.36□□□□□ -0.43
TMEM47-201ENST00000275954 Q8IYB0 196 aa12.36□□□□□ -0.43
TMEM47-201ENST00000275954 FADS6Q8N9I5 356 aa12.36□□□□□ -0.43
TMEM47-201ENST00000275954 SMIM7Q9BQ49 75 aa12.36□□□□□ -0.43
TMEM47-201ENST00000275954 RAB19A4D1S5 217 aa12.35□□□□□ -0.43
TMEM47-201ENST00000275954 ABCD4O14678 606 aa12.35□□□□□ -0.43
TMEM47-201ENST00000275954 PMELP40967 661 aa12.35□□□□□ -0.43
TMEM47-201ENST00000275954 NIT2Q9NQR4 276 aa12.35□□□□□ -0.43
TMEM47-201ENST00000275954 RCC2Q9P258 522 aaKnown RBP12.35□□□□□ -0.43
TMEM47-201ENST00000275954 OR5H1A6NKK0 313 aa12.35□□□□□ -0.43
TMEM47-201ENST00000275954 FAM74A7A6NL05 159 aa12.35□□□□□ -0.43
TMEM47-201ENST00000275954 FOXG1P55316 489 aaPredicted RBP12.35□□□□□ -0.43
TMEM47-201ENST00000275954 EWSR1Q01844 656 aaKnown RBP eCLIP12.35□□□□□ -0.43
TMEM47-201ENST00000275954 ZFP36L1Q07352 338 aaKnown RBP12.35□□□□□ -0.43
TMEM47-201ENST00000275954 ZNF345Q14585 488 aa12.35□□□□□ -0.43
TMEM47-201ENST00000275954 FAM74A3Q4VXF1 159 aa12.35□□□□□ -0.43
TMEM47-201ENST00000275954 LYG1Q8N1E2 194 aa12.35□□□□□ -0.43
TMEM47-201ENST00000275954 PINX1Q96BK5 328 aaKnown RBP12.35□□□□□ -0.43
TMEM47-201ENST00000275954 TMEM68Q96MH6 324 aa12.35□□□□□ -0.43
TMEM47-201ENST00000275954 LIPGQ9Y5X9 500 aa12.35□□□□□ -0.43
TMEM47-201ENST00000275954 MGAQ8IWI9 3026 aa12.35□□□□□ -0.43
TMEM47-201ENST00000275954 ARPC4-TTLL3A0A0A6YYG9 625 aa12.35□□□□□ -0.43
TMEM47-201ENST00000275954 MBPP02686 304 aaPredicted RBP12.35□□□□□ -0.43
TMEM47-201ENST00000275954 RAB5CP51148 216 aa12.35□□□□□ -0.43
TMEM47-201ENST00000275954 FLI1Q01543 452 aaPredicted RBP12.35□□□□□ -0.43
TMEM47-201ENST00000275954 CEACAM21Q3KPI0 293 aa12.35□□□□□ -0.43
TMEM47-201ENST00000275954 EDARADDQ8WWZ3 215 aa12.35□□□□□ -0.43
TMEM47-201ENST00000275954 IL36RNQ9UBH0 155 aa12.35□□□□□ -0.43
TMEM47-201ENST00000275954 LRRC30A6NM36 301 aa12.34□□□□□ -0.43
TMEM47-201ENST00000275954 FGF7P21781 194 aa12.34□□□□□ -0.43
TMEM47-201ENST00000275954 FHITP49789 147 aa12.34□□□□□ -0.43
TMEM47-201ENST00000275954 IGFBP7Q16270 282 aa12.34□□□□□ -0.43
TMEM47-201ENST00000275954 OR52M1Q8NGK5 317 aa12.34□□□□□ -0.43
TMEM47-201ENST00000275954 FGFBP3Q8TAT2 258 aa12.34□□□□□ -0.43
TMEM47-201ENST00000275954 NGBQ9NPG2 151 aa12.34□□□□□ -0.43
TMEM47-201ENST00000275954 ALPK3Q96L96 1907 aa12.34□□□□□ -0.43
TMEM47-201ENST00000275954 LRRK1Q38SD2 2015 aa12.34□□□□□ -0.43
TMEM47-201ENST00000275954 CYB5BO43169 146 aa12.34□□□□□ -0.43
TMEM47-201ENST00000275954 HAND1O96004 215 aa12.34□□□□□ -0.43
TMEM47-201ENST00000275954 MPV17LQ2QL34 196 aa12.34□□□□□ -0.43
TMEM47-201ENST00000275954 ASPHD2Q6ICH7 369 aa12.34□□□□□ -0.43
TMEM47-201ENST00000275954 SLC25A22Q9H936 323 aa12.34□□□□□ -0.43
TMEM47-201ENST00000275954 OR2W1Q9Y3N9 320 aa12.34□□□□□ -0.43
TMEM47-201ENST00000275954 MTORP42345 2549 aa12.34□□□□□ -0.43
TMEM47-201ENST00000275954 SYNGR2O43760 224 aa12.34□□□□□ -0.43
TMEM47-201ENST00000275954 CYTIPO60759 359 aa12.34□□□□□ -0.43
TMEM47-201ENST00000275954 CYC1P08574 325 aa12.34□□□□□ -0.43
TMEM47-201ENST00000275954 TMEM54Q969K7 222 aa12.34□□□□□ -0.43
TMEM47-201ENST00000275954 IGHV3OR15-7A0A075B7D8 119 aa12.33□□□□□ -0.43
TMEM47-201ENST00000275954 H7BYZ3 331 aa12.33□□□□□ -0.43
TMEM47-201ENST00000275954 NQO2P16083 231 aa12.33□□□□□ -0.43
TMEM47-201ENST00000275954 PPP1CCP36873 323 aaKnown RBP12.33□□□□□ -0.43
TMEM47-201ENST00000275954 CCL17Q92583 94 aa12.33□□□□□ -0.43
TMEM47-201ENST00000275954 LYZL4Q96KX0 146 aa12.33□□□□□ -0.43
TMEM47-201ENST00000275954 TRAV14DV4A0A0A6YYC5 116 aa12.33□□□□□ -0.44
TMEM47-201ENST00000275954 A0A1W2PPE3 182 aa12.33□□□□□ -0.44
TMEM47-201ENST00000275954 PINLYPA6NC86 204 aa12.33□□□□□ -0.44
TMEM47-201ENST00000275954 CCL21O00585 134 aa12.33□□□□□ -0.44
TMEM47-201ENST00000275954 MT-ND4LP03901 98 aa12.33□□□□□ -0.44
TMEM47-201ENST00000275954 FGF12P61328 243 aa12.33□□□□□ -0.44
TMEM47-201ENST00000275954 SLC38A11Q08AI6 406 aa12.33□□□□□ -0.44
TMEM47-201ENST00000275954 C22orf15Q8WYQ4 148 aa12.33□□□□□ -0.44
TMEM47-201ENST00000275954 TVP23CQ96ET8 276 aa12.33□□□□□ -0.44
TMEM47-201ENST00000275954 SAT2Q96F10 170 aaPredicted RBP12.33□□□□□ -0.44
TMEM47-201ENST00000275954 ABCA12Q86UK0 2595 aa12.33□□□□□ -0.44
TMEM47-201ENST00000275954 IGKV1D-8A0A087WSZ0 117 aa12.33□□□□□ -0.44
TMEM47-201ENST00000275954 MUC1P15941 1255 aaPredicted RBP12.33□□□□□ -0.44
TMEM47-201ENST00000275954 ATP6V0CP27449 155 aa12.33□□□□□ -0.44
TMEM47-201ENST00000275954 LY6G6FQ5SQ64 297 aa12.33□□□□□ -0.44
TMEM47-201ENST00000275954 PUSL1Q8N0Z8 303 aaKnown RBP12.33□□□□□ -0.44
TMEM47-201ENST00000275954 DDA1Q9BW61 102 aa12.33□□□□□ -0.44
TMEM47-201ENST00000275954 EGLN1Q9GZT9 426 aa12.33□□□□□ -0.44
TMEM47-201ENST00000275954 TLNRD1Q9H1K6 362 aa12.33□□□□□ -0.44
TMEM47-201ENST00000275954 PKD1L2Q7Z442 2459 aa12.33□□□□□ -0.44
TMEM47-201ENST00000275954 A0A0A6YYD4 124 aa12.32□□□□□ -0.44
TMEM47-201ENST00000275954 NTN3O00634 580 aaPredicted RBP12.32□□□□□ -0.44
TMEM47-201ENST00000275954 MELTFP08582 738 aa12.32□□□□□ -0.44
TMEM47-201ENST00000275954 RPS23P62266 143 aaKnown RBP12.32□□□□□ -0.44
TMEM47-201ENST00000275954 ZNF429Q86V71 674 aa12.32□□□□□ -0.44
TMEM47-201ENST00000275954 SPACA3Q8IXA5 215 aa12.32□□□□□ -0.44
TMEM47-201ENST00000275954 CPEB3Q8NE35 698 aaKnown RBP12.32□□□□□ -0.44
TMEM47-201ENST00000275954 MSI2Q96DH6 328 aaKnown RBP12.32□□□□□ -0.44
TMEM47-201ENST00000275954 CABLES2Q9BTV7 478 aa12.32□□□□□ -0.44
TMEM47-201ENST00000275954 SLC35B3Q9H1N7 401 aa12.32□□□□□ -0.44
TMEM47-201ENST00000275954 SLC2A8Q9NY64 477 aa12.32□□□□□ -0.44
TMEM47-201ENST00000275954 FREM1Q5H8C1 2179 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms