RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 SMAD4Q13485 552 aaKnown RBP10.54□□□□□ -0.72
SMG6-201ENST00000263073 OR2M3Q8NG83 312 aa10.54□□□□□ -0.72
SMG6-201ENST00000263073 LILRB1Q8NHL6 650 aaPredicted RBP10.54□□□□□ -0.72
SMG6-201ENST00000263073 FAM222BQ8WU58 562 aa10.54□□□□□ -0.72
SMG6-201ENST00000263073 GABRG3Q99928 467 aa10.54□□□□□ -0.72
SMG6-201ENST00000263073 ZNF665Q9H7R5 613 aa10.54□□□□□ -0.72
SMG6-201ENST00000263073 SEBOXQ9HB31 216 aaPredicted RBP10.54□□□□□ -0.72
SMG6-201ENST00000263073 TMEM167BQ9NRX6 74 aa10.54□□□□□ -0.72
SMG6-201ENST00000263073 SMCHD1A6NHR9 2005 aa10.53□□□□□ -0.72
SMG6-201ENST00000263073 A0A1W2PN81 502 aa10.53□□□□□ -0.72
SMG6-201ENST00000263073 RECKO95980 971 aa10.53□□□□□ -0.72
SMG6-201ENST00000263073 C10orf113Q5VZT2 155 aa10.53□□□□□ -0.72
SMG6-201ENST00000263073 PTPMT1Q8WUK0 201 aaPredicted RBP10.53□□□□□ -0.72
SMG6-201ENST00000263073 ATG101Q9BSB4 218 aa10.53□□□□□ -0.72
SMG6-201ENST00000263073 CXCL10P02778 98 aa10.53□□□□□ -0.72
SMG6-201ENST00000263073 C21orf58P58505 322 aa10.53□□□□□ -0.72
SMG6-201ENST00000263073 CD81P60033 236 aa10.53□□□□□ -0.72
SMG6-201ENST00000263073 ZNF519Q8TB69 540 aa10.53□□□□□ -0.72
SMG6-201ENST00000263073 ZDHHC16Q969W1 377 aa10.53□□□□□ -0.72
SMG6-201ENST00000263073 SLC26A1Q9H2B4 701 aa10.53□□□□□ -0.72
SMG6-201ENST00000263073 MYOZ1Q9NP98 299 aaPredicted RBP10.53□□□□□ -0.72
SMG6-201ENST00000263073 TRAV38-1A0A0B4J264 116 aa10.53□□□□□ -0.72
SMG6-201ENST00000263073 TNFRSF1AP19438 455 aa10.53□□□□□ -0.72
SMG6-201ENST00000263073 ZNF345Q14585 488 aa10.53□□□□□ -0.72
SMG6-201ENST00000263073 KIAA1644Q3SXP7 199 aa10.53□□□□□ -0.72
SMG6-201ENST00000263073 OR8I2Q8N0Y5 310 aa10.53□□□□□ -0.72
SMG6-201ENST00000263073 OR52M1Q8NGK5 317 aa10.53□□□□□ -0.72
SMG6-201ENST00000263073 OR4S2Q8NH73 311 aa10.53□□□□□ -0.72
SMG6-201ENST00000263073 GPBAR1Q8TDU6 330 aa10.53□□□□□ -0.72
SMG6-201ENST00000263073 SGK494Q96LW2 274 aa10.53□□□□□ -0.72
SMG6-201ENST00000263073 CXXC4Q9H2H0 198 aa10.53□□□□□ -0.72
SMG6-201ENST00000263073 ZFP64Q9NPA5 681 aa10.53□□□□□ -0.72
SMG6-201ENST00000263073 TBX21Q9UL17 535 aa10.53□□□□□ -0.72
SMG6-201ENST00000263073 GRIFINA4D1Z8 144 aa10.53□□□□□ -0.72
SMG6-201ENST00000263073 SMPD2O60906 423 aa10.53□□□□□ -0.72
SMG6-201ENST00000263073 CA2P00918 260 aa10.53□□□□□ -0.72
SMG6-201ENST00000263073 ANKRD55Q3KP44 614 aa10.53□□□□□ -0.72
SMG6-201ENST00000263073 WFDC3Q8IUB2 231 aa10.53□□□□□ -0.72
SMG6-201ENST00000263073 RREB1Q92766 1687 aa10.53□□□□□ -0.72
SMG6-201ENST00000263073 OOEPA6NGQ2 149 aa10.52□□□□□ -0.72
SMG6-201ENST00000263073 CORTO00230 105 aa10.52□□□□□ -0.72
SMG6-201ENST00000263073 DNPH1O43598 174 aa10.52□□□□□ -0.72
SMG6-201ENST00000263073 CCL3P10147 92 aa10.52□□□□□ -0.72
SMG6-201ENST00000263073 CXorf66Q5JRM2 361 aaPredicted RBP10.52□□□□□ -0.72
SMG6-201ENST00000263073 ZNF385AQ96PM9 386 aaKnown RBP10.52□□□□□ -0.72
SMG6-201ENST00000263073 TP53RKQ96S44 253 aa10.52□□□□□ -0.72
SMG6-201ENST00000263073 RASL10BQ96S79 203 aa10.52□□□□□ -0.72
SMG6-201ENST00000263073 MS4A18H0YCH9 400 aa10.52□□□□□ -0.73
SMG6-201ENST00000263073 DNASE2O00115 360 aaPredicted RBP10.52□□□□□ -0.73
SMG6-201ENST00000263073 PDE6DO43924 150 aa10.52□□□□□ -0.73
SMG6-201ENST00000263073 PITX3O75364 302 aa10.52□□□□□ -0.73
SMG6-201ENST00000263073 DEDDO75618 318 aa10.52□□□□□ -0.73
SMG6-201ENST00000263073 HKR1P10072 659 aa10.52□□□□□ -0.73
SMG6-201ENST00000263073 KLF3P57682 345 aaPredicted RBP10.52□□□□□ -0.73
SMG6-201ENST00000263073 MS4A18Q3C1V0 323 aa10.52□□□□□ -0.73
SMG6-201ENST00000263073 KRTCAP3Q53RY4 240 aa10.52□□□□□ -0.73
SMG6-201ENST00000263073 ARAP2Q8WZ64 1704 aa10.52□□□□□ -0.73
SMG6-201ENST00000263073 SCN9AQ15858 1988 aa10.52□□□□□ -0.73
SMG6-201ENST00000263073 SURF2Q15527 256 aaPredicted RBP10.52□□□□□ -0.73
SMG6-201ENST00000263073 IZUMO4Q1ZYL8 232 aa10.52□□□□□ -0.73
SMG6-201ENST00000263073 RSPO4Q2I0M5 234 aaPredicted RBP10.52□□□□□ -0.73
SMG6-201ENST00000263073 ZNF600Q6ZNG1 722 aa10.52□□□□□ -0.73
SMG6-201ENST00000263073 OR2H1Q9GZK4 316 aa10.52□□□□□ -0.73
SMG6-201ENST00000263073 OR2W1Q9Y3N9 320 aa10.52□□□□□ -0.73
SMG6-201ENST00000263073 hADV38S2A0JD32 116 aa10.52□□□□□ -0.73
SMG6-201ENST00000263073 BCL2P10415 239 aa10.52□□□□□ -0.73
SMG6-201ENST00000263073 ACP1P24666 158 aa10.52□□□□□ -0.73
SMG6-201ENST00000263073 RNPS1Q15287 305 aaKnown RBP10.52□□□□□ -0.73
SMG6-201ENST00000263073 COL5A1-AS1Q5SY13 56 aa10.52□□□□□ -0.73
SMG6-201ENST00000263073 WNK3Q9BYP7 1800 aa10.52□□□□□ -0.73
SMG6-201ENST00000263073 SEC11BP0C7V7 166 aa10.52□□□□□ -0.73
SMG6-201ENST00000263073 MFAP2P55001 183 aa10.52□□□□□ -0.73
SMG6-201ENST00000263073 PGLYRP3Q96LB9 341 aa10.52□□□□□ -0.73
SMG6-201ENST00000263073 A0A1W2PPC1 479 aa10.51□□□□□ -0.73
SMG6-201ENST00000263073 CGB1A6NKQ9 187 aa10.51□□□□□ -0.73
SMG6-201ENST00000263073 SPINT1O43278 529 aa10.51□□□□□ -0.73
SMG6-201ENST00000263073 ADAM11O75078 769 aa10.51□□□□□ -0.73
SMG6-201ENST00000263073 CXorf1O96002 111 aa10.51□□□□□ -0.73
SMG6-201ENST00000263073 FCGR3AP08637 254 aa10.51□□□□□ -0.73
SMG6-201ENST00000263073 SCTP09683 121 aa10.51□□□□□ -0.73
SMG6-201ENST00000263073 KIR2DS2P43631 304 aa10.51□□□□□ -0.73
SMG6-201ENST00000263073 ABHD14BQ96IU4 210 aa10.51□□□□□ -0.73
SMG6-201ENST00000263073 PRSS27Q9BQR3 290 aa10.51□□□□□ -0.73
SMG6-201ENST00000263073 CES1P1Q9UKY3 287 aa10.51□□□□□ -0.73
SMG6-201ENST00000263073 F11RQ9Y624 299 aaKnown RBP10.51□□□□□ -0.73
SMG6-201ENST00000263073 DDTP30046 118 aa10.51□□□□□ -0.73
SMG6-201ENST00000263073 SLC25A30Q5SVS4 291 aa10.51□□□□□ -0.73
SMG6-201ENST00000263073 HOGA1Q86XE5 327 aa10.51□□□□□ -0.73
SMG6-201ENST00000263073 C9orf40Q8IXQ3 194 aa10.51□□□□□ -0.73
SMG6-201ENST00000263073 RALYQ9UKM9 306 aaKnown RBP10.51□□□□□ -0.73
SMG6-201ENST00000263073 A6NDN8 102 aa10.51□□□□□ -0.73
SMG6-201ENST00000263073 SOX8P57073 446 aa10.51□□□□□ -0.73
SMG6-201ENST00000263073 CACFD1Q9UGQ2 172 aa10.51□□□□□ -0.73
SMG6-201ENST00000263073 PTP4A3O75365 173 aa10.51□□□□□ -0.73
SMG6-201ENST00000263073 GCM2O75603 506 aaPredicted RBP10.51□□□□□ -0.73
SMG6-201ENST00000263073 WDFY1Q8IWB7 410 aa10.51□□□□□ -0.73
SMG6-201ENST00000263073 OR1P1Q8NH06 330 aa10.51□□□□□ -0.73
SMG6-201ENST00000263073 M0QZ24 198 aa10.51□□□□□ -0.73
SMG6-201ENST00000263073 HIST1H1BP16401 226 aaKnown RBP10.51□□□□□ -0.73
SMG6-201ENST00000263073 RELBQ01201 579 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms