RNA–Protein interactions for RNA: ENST00000262675.11

TTC39A-201, Transcript of tetratricopeptide repeat domain 39A, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TTC39A, Length 2,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-201ENST00000262675 RPL36A-HNRNPH2H7BZ11 118 aa8.18□□□□□ -1.1
TTC39A-201ENST00000262675 H7C2Y5 167 aa8.18□□□□□ -1.1
TTC39A-201ENST00000262675 PLAUP00749 431 aa8.18□□□□□ -1.1
TTC39A-201ENST00000262675 SEC11BP0C7V7 166 aa8.18□□□□□ -1.1
TTC39A-201ENST00000262675 B4GALT1P15291 398 aa8.18□□□□□ -1.1
TTC39A-201ENST00000262675 DUSP1P28562 367 aa8.18□□□□□ -1.1
TTC39A-201ENST00000262675 RAB5CP51148 216 aa8.18□□□□□ -1.1
TTC39A-201ENST00000262675 TMEM187Q14656 261 aa8.18□□□□□ -1.1
TTC39A-201ENST00000262675 TMEM268Q5VZI3 342 aa8.18□□□□□ -1.1
TTC39A-201ENST00000262675 DHRS7BQ6IAN0 325 aaPredicted RBP8.18□□□□□ -1.1
TTC39A-201ENST00000262675 ATRAIDQ6UW56 229 aa8.18□□□□□ -1.1
TTC39A-201ENST00000262675 LIAT1Q6ZQX7 453 aa8.18□□□□□ -1.1
TTC39A-201ENST00000262675 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.18□□□□□ -1.1
TTC39A-201ENST00000262675 MOB3AQ96BX8 217 aa8.18□□□□□ -1.1
TTC39A-201ENST00000262675 ZNF837Q96EG3 531 aaPredicted RBP8.18□□□□□ -1.1
TTC39A-201ENST00000262675 ABHD14BQ96IU4 210 aa8.18□□□□□ -1.1
TTC39A-201ENST00000262675 ARV1Q9H2C2 271 aa8.18□□□□□ -1.1
TTC39A-201ENST00000262675 FAM212BQ9NTI7 297 aaPredicted RBP8.18□□□□□ -1.1
TTC39A-201ENST00000262675 UQCC1Q9NVA1 299 aa8.18□□□□□ -1.1
TTC39A-201ENST00000262675 CDC42EP3Q9UKI2 254 aa8.18□□□□□ -1.1
TTC39A-201ENST00000262675 RTTNQ86VV8 2226 aa8.18□□□□□ -1.1
TTC39A-201ENST00000262675 IGKV1-27A0A075B6S5 117 aa8.17□□□□□ -1.1
TTC39A-201ENST00000262675 IGKV1D-8A0A087WSZ0 117 aa8.17□□□□□ -1.1
TTC39A-201ENST00000262675 DUXBA0A1W2PPF3 345 aa8.17□□□□□ -1.1
TTC39A-201ENST00000262675 GLAP06280 429 aa8.17□□□□□ -1.1
TTC39A-201ENST00000262675 MMP7P09237 267 aaPredicted RBP8.17□□□□□ -1.1
TTC39A-201ENST00000262675 FCGR2CP31995 323 aa8.17□□□□□ -1.1
TTC39A-201ENST00000262675 P2RY1P47900 373 aa8.17□□□□□ -1.1
TTC39A-201ENST00000262675 RBM11P57052 281 aaKnown RBP8.17□□□□□ -1.1
TTC39A-201ENST00000262675 MST1LQ2TV78 715 aa8.17□□□□□ -1.1
TTC39A-201ENST00000262675 DPPA2Q7Z7J5 298 aa8.17□□□□□ -1.1
TTC39A-201ENST00000262675 DTX2Q86UW9 622 aa8.17□□□□□ -1.1
TTC39A-201ENST00000262675 OR10AD1Q8NGE0 317 aa8.17□□□□□ -1.1
TTC39A-201ENST00000262675 OR51F2Q8NH61 342 aa8.17□□□□□ -1.1
TTC39A-201ENST00000262675 OR2AE1Q8NHA4 323 aa8.17□□□□□ -1.1
TTC39A-201ENST00000262675 LYPD6BQ8NI32 183 aa8.17□□□□□ -1.1
TTC39A-201ENST00000262675 NANOS1Q8WY41 292 aaKnown RBP8.17□□□□□ -1.1
TTC39A-201ENST00000262675 MAFIPQ8WZ33 124 aa8.17□□□□□ -1.1
TTC39A-201ENST00000262675 MUCL1Q96DR8 90 aa8.17□□□□□ -1.1
TTC39A-201ENST00000262675 SULT4A1Q9BR01 284 aa8.17□□□□□ -1.1
TTC39A-201ENST00000262675 RSRP1Q9BUV0 290 aa8.17□□□□□ -1.1
TTC39A-201ENST00000262675 RHOFQ9HBH0 211 aa8.17□□□□□ -1.1
TTC39A-201ENST00000262675 OR2S2Q9NQN1 319 aa8.17□□□□□ -1.1
TTC39A-201ENST00000262675 YAE1D1Q9NRH1 226 aa8.17□□□□□ -1.1
TTC39A-201ENST00000262675 ST3GAL6Q9Y274 331 aa8.17□□□□□ -1.1
TTC39A-201ENST00000262675 STARD10Q9Y365 291 aa8.17□□□□□ -1.1
TTC39A-201ENST00000262675 SPRY1O43609 319 aaPredicted RBP8.17□□□□□ -1.1
TTC39A-201ENST00000262675 ANGPTL7O43827 346 aa8.17□□□□□ -1.1
TTC39A-201ENST00000262675 GPR137BO60478 399 aa8.17□□□□□ -1.1
TTC39A-201ENST00000262675 MRPL33O75394 65 aaKnown RBP8.17□□□□□ -1.1
TTC39A-201ENST00000262675 CDS2O95674 445 aa8.17□□□□□ -1.1
TTC39A-201ENST00000262675 CTXN2P0C2S0 81 aa8.17□□□□□ -1.1
TTC39A-201ENST00000262675 HERV-K104P61576 105 aa8.17□□□□□ -1.1
TTC39A-201ENST00000262675 SWI5Q1ZZU3 235 aa8.17□□□□□ -1.1
TTC39A-201ENST00000262675 PLCXD3Q63HM9 321 aa8.17□□□□□ -1.1
TTC39A-201ENST00000262675 HAGHLQ6PII5 290 aaPredicted RBP8.17□□□□□ -1.1
TTC39A-201ENST00000262675 Q6ZT83 130 aa8.17□□□□□ -1.1
TTC39A-201ENST00000262675 BHLHA15Q7RTS1 189 aaPredicted RBP8.17□□□□□ -1.1
TTC39A-201ENST00000262675 LINC00596Q86U02 117 aa8.17□□□□□ -1.1
TTC39A-201ENST00000262675 GTF3AQ92664 365 aaKnown RBP8.17□□□□□ -1.1
TTC39A-201ENST00000262675 ALKBH3Q96Q83 286 aaPredicted RBP8.17□□□□□ -1.1
TTC39A-201ENST00000262675 SPIN2AQ99865 258 aa8.17□□□□□ -1.1
TTC39A-201ENST00000262675 SPIN2BQ9BPZ2 258 aa8.17□□□□□ -1.1
TTC39A-201ENST00000262675 RIMS4Q9H426 269 aaPredicted RBP8.17□□□□□ -1.1
TTC39A-201ENST00000262675 PLK3Q9H4B4 646 aa8.17□□□□□ -1.1
TTC39A-201ENST00000262675 C12orf49Q9H741 205 aa8.17□□□□□ -1.1
TTC39A-201ENST00000262675 TREM1Q9NP99 234 aa8.17□□□□□ -1.1
TTC39A-201ENST00000262675 ATP6V1G2-DDX39BF2Z307 99 aa8.16□□□□□ -1.1
TTC39A-201ENST00000262675 GEMIN2O14893 280 aaKnown RBP8.16□□□□□ -1.1
TTC39A-201ENST00000262675 F12P00748 615 aaPredicted RBP8.16□□□□□ -1.1
TTC39A-201ENST00000262675 DVL1P1P54792 670 aaPredicted RBP8.16□□□□□ -1.1
TTC39A-201ENST00000262675 RND3P61587 244 aa8.16□□□□□ -1.1
TTC39A-201ENST00000262675 ZNF92Q03936 586 aa8.16□□□□□ -1.1
TTC39A-201ENST00000262675 HGFACQ04756 655 aa8.16□□□□□ -1.1
TTC39A-201ENST00000262675 TIMM23BQ5SRD1 257 aa8.16□□□□□ -1.1
TTC39A-201ENST00000262675 RPL7L1Q6DKI1 246 aaKnown RBP8.16□□□□□ -1.1
TTC39A-201ENST00000262675 BTNL8Q6UX41 500 aa8.16□□□□□ -1.1
TTC39A-201ENST00000262675 SKA3Q8IX90 412 aa8.16□□□□□ -1.1
TTC39A-201ENST00000262675 PUSL1Q8N0Z8 303 aaKnown RBP8.16□□□□□ -1.1
TTC39A-201ENST00000262675 FBXL14Q8N1E6 418 aa8.16□□□□□ -1.1
TTC39A-201ENST00000262675 OR4A4PQ8NGN8 299 aa8.16□□□□□ -1.1
TTC39A-201ENST00000262675 LILRB1Q8NHL6 650 aaPredicted RBP8.16□□□□□ -1.1
TTC39A-201ENST00000262675 AKR7LQ8NHP1 331 aa8.16□□□□□ -1.1
TTC39A-201ENST00000262675 NRIP2Q9BQI9 281 aa8.16□□□□□ -1.1
TTC39A-201ENST00000262675 SLC2A9Q9NRM0 540 aa8.16□□□□□ -1.1
TTC39A-201ENST00000262675 RCC2Q9P258 522 aaKnown RBP8.16□□□□□ -1.1
TTC39A-201ENST00000262675 NOSIPQ9Y314 301 aaKnown RBP8.16□□□□□ -1.1
TTC39A-201ENST00000262675 STRAPQ9Y3F4 350 aaKnown RBP8.16□□□□□ -1.1
TTC39A-201ENST00000262675 TLN2Q9Y4G6 2542 aa8.16□□□□□ -1.1
TTC39A-201ENST00000262675 ZNF724A8MTY0 619 aa8.15□□□□□ -1.1
TTC39A-201ENST00000262675 ST8SIA3O43173 380 aa8.15□□□□□ -1.1
TTC39A-201ENST00000262675 FBXO24O75426 580 aa8.15□□□□□ -1.1
TTC39A-201ENST00000262675 MED6O75586 246 aa8.15□□□□□ -1.1
TTC39A-201ENST00000262675 DIRAS3O95661 229 aa8.15□□□□□ -1.1
TTC39A-201ENST00000262675 CD5P06127 495 aa8.15□□□□□ -1.1
TTC39A-201ENST00000262675 SOD3P08294 240 aa8.15□□□□□ -1.1
TTC39A-201ENST00000262675 SLC25A16P16260 332 aa8.15□□□□□ -1.1
TTC39A-201ENST00000262675 NTF4P34130 210 aa8.15□□□□□ -1.1
TTC39A-201ENST00000262675 TMEM33P57088 247 aa8.15□□□□□ -1.1
TTC39A-201ENST00000262675 MPV17LQ2QL34 196 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms