RNA–Protein interactions for RNA: ENST00000261897.5

PRPF40B-201, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-201ENST00000261897 TCL1AP56279 114 aa13.75□□□□□ -0.21
PRPF40B-201ENST00000261897 PPP1CBP62140 327 aa13.75□□□□□ -0.21
PRPF40B-201ENST00000261897 SHBQ15464 509 aa13.75□□□□□ -0.21
PRPF40B-201ENST00000261897 TMEM92Q6UXU6 159 aa13.75□□□□□ -0.21
PRPF40B-201ENST00000261897 OR1N1Q8NGS0 311 aa13.75□□□□□ -0.21
PRPF40B-201ENST00000261897 C1QTNF9BB2RNN3 333 aa13.75□□□□□ -0.21
PRPF40B-201ENST00000261897 ZNF17P17021 662 aa13.75□□□□□ -0.21
PRPF40B-201ENST00000261897 KITLGP21583 273 aa13.75□□□□□ -0.21
PRPF40B-201ENST00000261897 SRYQ05066 204 aa13.75□□□□□ -0.21
PRPF40B-201ENST00000261897 TDRG1Q3Y452 100 aa13.75□□□□□ -0.21
PRPF40B-201ENST00000261897 PRR31Q5SQ13 230 aa13.75□□□□□ -0.21
PRPF40B-201ENST00000261897 Q6ZN92 141 aa13.75□□□□□ -0.21
PRPF40B-201ENST00000261897 ZNF611Q8N823 705 aa13.75□□□□□ -0.21
PRPF40B-201ENST00000261897 SGMS2Q8NHU3 365 aa13.75□□□□□ -0.21
PRPF40B-201ENST00000261897 PP6455Q8WZ26 134 aa13.75□□□□□ -0.21
PRPF40B-201ENST00000261897 LYZL4Q96KX0 146 aa13.75□□□□□ -0.21
PRPF40B-201ENST00000261897 ZNF488Q96MN9 340 aa13.75□□□□□ -0.21
PRPF40B-201ENST00000261897 FSCN3Q9NQT6 498 aa13.75□□□□□ -0.21
PRPF40B-201ENST00000261897 CA11O75493 328 aa13.75□□□□□ -0.21
PRPF40B-201ENST00000261897 GZMHP20718 246 aa13.75□□□□□ -0.21
PRPF40B-201ENST00000261897 CD82P27701 267 aa13.75□□□□□ -0.21
PRPF40B-201ENST00000261897 SRPXP78539 464 aa13.75□□□□□ -0.21
PRPF40B-201ENST00000261897 MEF2BQ02080 365 aaPredicted RBP13.75□□□□□ -0.21
PRPF40B-201ENST00000261897 FAM90A2PQ658T7 463 aa13.75□□□□□ -0.21
PRPF40B-201ENST00000261897 TMEM222Q9H0R3 208 aa13.75□□□□□ -0.21
PRPF40B-201ENST00000261897 PLCE1Q9P212 2302 aa13.74□□□□□ -0.21
PRPF40B-201ENST00000261897 A0A096LPE4 126 aa13.74□□□□□ -0.21
PRPF40B-201ENST00000261897 A0A1W2PPZ6 126 aa13.74□□□□□ -0.21
PRPF40B-201ENST00000261897 VDAC1P21796 283 aa13.74□□□□□ -0.21
PRPF40B-201ENST00000261897 EDDM3BP56851 147 aa13.74□□□□□ -0.21
PRPF40B-201ENST00000261897 HTD2P86397 168 aa13.74□□□□□ -0.21
PRPF40B-201ENST00000261897 VAMP3Q15836 100 aa13.74□□□□□ -0.21
PRPF40B-201ENST00000261897 SYT13Q7L8C5 426 aa13.74□□□□□ -0.21
PRPF40B-201ENST00000261897 LRRC61Q9BV99 259 aa13.74□□□□□ -0.21
PRPF40B-201ENST00000261897 CAPZBP47756 277 aa13.74□□□□□ -0.21
PRPF40B-201ENST00000261897 GPM6AP51674 278 aa13.74□□□□□ -0.21
PRPF40B-201ENST00000261897 Q96M66 194 aa13.74□□□□□ -0.21
PRPF40B-201ENST00000261897 IL36RNQ9UBH0 155 aa13.74□□□□□ -0.21
PRPF40B-201ENST00000261897 RAB4AP20338 218 aa13.73□□□□□ -0.21
PRPF40B-201ENST00000261897 CBLN1P23435 193 aa13.73□□□□□ -0.21
PRPF40B-201ENST00000261897 OR10J1P30954 320 aa13.73□□□□□ -0.21
PRPF40B-201ENST00000261897 ZNF816Q0VGE8 651 aaPredicted RBP13.73□□□□□ -0.21
PRPF40B-201ENST00000261897 EIF3IQ13347 325 aaKnown RBP13.73□□□□□ -0.21
PRPF40B-201ENST00000261897 FFAR4Q5NUL3 377 aa13.73□□□□□ -0.21
PRPF40B-201ENST00000261897 ADPRHL1Q8NDY3 354 aa13.73□□□□□ -0.21
PRPF40B-201ENST00000261897 LYPD6BQ8NI32 183 aa13.73□□□□□ -0.21
PRPF40B-201ENST00000261897 PSMF1Q92530 271 aa13.73□□□□□ -0.21
PRPF40B-201ENST00000261897 OR4C12Q96R67 309 aa13.73□□□□□ -0.21
PRPF40B-201ENST00000261897 TMEM9BQ9NQ34 198 aa13.73□□□□□ -0.21
PRPF40B-201ENST00000261897 CLDN16Q9Y5I7 305 aa13.73□□□□□ -0.21
PRPF40B-201ENST00000261897 IGKV1D-13A0A0B4J2D9 117 aa13.73□□□□□ -0.21
PRPF40B-201ENST00000261897 A0A1W2PQF6 199 aa13.73□□□□□ -0.21
PRPF40B-201ENST00000261897 A6NCN8 305 aa13.73□□□□□ -0.21
PRPF40B-201ENST00000261897 TSPAN2O60636 221 aa13.73□□□□□ -0.21
PRPF40B-201ENST00000261897 PDCD6O75340 191 aa13.73□□□□□ -0.21
PRPF40B-201ENST00000261897 CDS2O95674 445 aa13.73□□□□□ -0.21
PRPF40B-201ENST00000261897 IGKV1-13P0DP09 117 aa13.73□□□□□ -0.21
PRPF40B-201ENST00000261897 MPLP40238 635 aa13.73□□□□□ -0.21
PRPF40B-201ENST00000261897 TDGF1P3P51864 188 aa13.73□□□□□ -0.21
PRPF40B-201ENST00000261897 MMDQ15546 238 aa13.73□□□□□ -0.21
PRPF40B-201ENST00000261897 ACOT6Q3I5F7 207 aaPredicted RBP13.73□□□□□ -0.21
PRPF40B-201ENST00000261897 MANBALQ9NQG1 85 aa13.73□□□□□ -0.21
PRPF40B-201ENST00000261897 GCH1P30793 250 aa13.73□□□□□ -0.21
PRPF40B-201ENST00000261897 KIR2DL1P43626 348 aaPredicted RBP13.73□□□□□ -0.21
PRPF40B-201ENST00000261897 H1FOOQ8IZA3 346 aaPredicted RBP13.73□□□□□ -0.21
PRPF40B-201ENST00000261897 FAM131CQ96AQ9 280 aa13.73□□□□□ -0.21
PRPF40B-201ENST00000261897 GPR27Q9NS67 375 aa13.73□□□□□ -0.21
PRPF40B-201ENST00000261897 CD81P60033 236 aa13.72□□□□□ -0.21
PRPF40B-201ENST00000261897 SLC38A11Q08AI6 406 aa13.72□□□□□ -0.21
PRPF40B-201ENST00000261897 SELENOHQ8IZQ5 122 aaKnown RBP13.72□□□□□ -0.21
PRPF40B-201ENST00000261897 SIGLECL1Q8N7X8 197 aa13.72□□□□□ -0.21
PRPF40B-201ENST00000261897 OR10G4Q8NGN3 311 aa13.72□□□□□ -0.21
PRPF40B-201ENST00000261897 OR10G9Q8NGN4 311 aa13.72□□□□□ -0.21
PRPF40B-201ENST00000261897 OR10G7Q8NGN6 311 aa13.72□□□□□ -0.21
PRPF40B-201ENST00000261897 OR1L3Q8NH93 324 aa13.72□□□□□ -0.21
PRPF40B-201ENST00000261897 A0A1B0GWJ7 208 aa13.72□□□□□ -0.21
PRPF40B-201ENST00000261897 DHHO43323 396 aa13.72□□□□□ -0.21
PRPF40B-201ENST00000261897 HRASP01112 189 aa13.72□□□□□ -0.21
PRPF40B-201ENST00000261897 BTF3P20290 206 aaKnown RBP13.72□□□□□ -0.21
PRPF40B-201ENST00000261897 HNRNPA3P51991 378 aaKnown RBP13.72□□□□□ -0.21
PRPF40B-201ENST00000261897 IL24Q13007 206 aa13.72□□□□□ -0.21
PRPF40B-201ENST00000261897 MRGPRGQ86SM5 289 aa13.72□□□□□ -0.21
PRPF40B-201ENST00000261897 NDUFB4O95168 129 aa13.72□□□□□ -0.21
PRPF40B-201ENST00000261897 CHRNB4P30926 498 aa13.72□□□□□ -0.21
PRPF40B-201ENST00000261897 AMTP48728 403 aa13.72□□□□□ -0.21
PRPF40B-201ENST00000261897 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.72□□□□□ -0.21
PRPF40B-201ENST00000261897 OR10J5Q8NHC4 309 aa13.72□□□□□ -0.21
PRPF40B-201ENST00000261897 PHOSPHO2Q8TCD6 241 aa13.72□□□□□ -0.21
PRPF40B-201ENST00000261897 ST8SIA1Q92185 356 aa13.72□□□□□ -0.21
PRPF40B-201ENST00000261897 WNT10AQ9GZT5 417 aa13.72□□□□□ -0.21
PRPF40B-201ENST00000261897 SMDT1Q9H4I9 107 aa13.72□□□□□ -0.21
PRPF40B-201ENST00000261897 FCN1O00602 326 aa13.71□□□□□ -0.21
PRPF40B-201ENST00000261897 SYNGR2O43760 224 aa13.71□□□□□ -0.21
PRPF40B-201ENST00000261897 NPIPB7O75200 414 aa13.71□□□□□ -0.21
PRPF40B-201ENST00000261897 RAB7AP51149 207 aa13.71□□□□□ -0.21
PRPF40B-201ENST00000261897 RPL23P62829 140 aaKnown RBP13.71□□□□□ -0.21
PRPF40B-201ENST00000261897 SUMO1P63165 101 aaKnown RBP13.71□□□□□ -0.21
PRPF40B-201ENST00000261897 TMEM183BQ1AE95 376 aa13.71□□□□□ -0.21
PRPF40B-201ENST00000261897 POLR3KQ9Y2Y1 108 aaPredicted RBP13.71□□□□□ -0.21
PRPF40B-201ENST00000261897 C11orf94C9JXX5 98 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms