RNA–Protein interactions for RNA: ENST00000261726.10

CUX2-201, Transcript of cut like homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUX2, Length 6,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-201ENST00000261726 ZNF273Q14593 569 aa12.52□□□□□ -0.4
CUX2-201ENST00000261726 MESTQ5EB52 335 aa12.52□□□□□ -0.4
CUX2-201ENST00000261726 EBLN2Q6P2I7 272 aa12.52□□□□□ -0.4
CUX2-201ENST00000261726 FADS6Q8N9I5 356 aa12.52□□□□□ -0.4
CUX2-201ENST00000261726 GPR61Q9BZJ8 451 aa12.52□□□□□ -0.4
CUX2-201ENST00000261726 ZFP30Q9Y2G7 519 aa12.52□□□□□ -0.4
CUX2-201ENST00000261726 IGKV3OR2-268A0A0C4DH90 116 aa12.52□□□□□ -0.41
CUX2-201ENST00000261726 CCL21O00585 134 aa12.52□□□□□ -0.41
CUX2-201ENST00000261726 PPYP01298 95 aa12.52□□□□□ -0.41
CUX2-201ENST00000261726 IGF2P01344 180 aa12.52□□□□□ -0.41
CUX2-201ENST00000261726 EWSR1Q01844 656 aaKnown RBP eCLIP12.52□□□□□ -0.41
CUX2-201ENST00000261726 C1QL3Q5VWW1 255 aa12.52□□□□□ -0.41
CUX2-201ENST00000261726 GPBAR1Q8TDU6 330 aa12.52□□□□□ -0.41
CUX2-201ENST00000261726 SLC25A10Q9UBX3 287 aaPredicted RBP12.52□□□□□ -0.41
CUX2-201ENST00000261726 PRF1P14222 555 aa12.52□□□□□ -0.41
CUX2-201ENST00000261726 ZNF441Q8N8Z8 693 aa12.52□□□□□ -0.41
CUX2-201ENST00000261726 C16orf92Q96LL3 132 aa12.52□□□□□ -0.41
CUX2-201ENST00000261726 FRRS1LQ9P0K9 344 aa12.52□□□□□ -0.41
CUX2-201ENST00000261726 CXCL10P02778 98 aa12.52□□□□□ -0.41
CUX2-201ENST00000261726 CD99P14209 185 aa12.52□□□□□ -0.41
CUX2-201ENST00000261726 HIST1H1BP16401 226 aaKnown RBP12.52□□□□□ -0.41
CUX2-201ENST00000261726 XAF1Q6GPH4 301 aa12.52□□□□□ -0.41
CUX2-201ENST00000261726 TEPPQ6URK8 271 aa12.52□□□□□ -0.41
CUX2-201ENST00000261726 ZNF519Q8TB69 540 aa12.52□□□□□ -0.41
CUX2-201ENST00000261726 ABHD1Q96SE0 405 aa12.52□□□□□ -0.41
CUX2-201ENST00000261726 PIPOXQ9P0Z9 390 aa12.52□□□□□ -0.41
CUX2-201ENST00000261726 SYNGR1O43759 233 aa12.51□□□□□ -0.41
CUX2-201ENST00000261726 COL10A1Q03692 680 aa12.51□□□□□ -0.41
CUX2-201ENST00000261726 RASL10BQ96S79 203 aa12.51□□□□□ -0.41
CUX2-201ENST00000261726 RCC2Q9P258 522 aaKnown RBP12.51□□□□□ -0.41
CUX2-201ENST00000261726 SSC5DA1L4H1 1573 aa12.51□□□□□ -0.41
CUX2-201ENST00000261726 FFAR1O14842 300 aa12.51□□□□□ -0.41
CUX2-201ENST00000261726 LYZL2Q7Z4W2 148 aa12.51□□□□□ -0.41
CUX2-201ENST00000261726 FAM60AQ9NP50 221 aa12.51□□□□□ -0.41
CUX2-201ENST00000261726 WNT16Q9UBV4 365 aa12.51□□□□□ -0.41
CUX2-201ENST00000261726 PGA4P0DJD7 388 aa12.51□□□□□ -0.41
CUX2-201ENST00000261726 PGA5P0DJD9 388 aa12.51□□□□□ -0.41
CUX2-201ENST00000261726 TM4SF20Q53R12 229 aa12.51□□□□□ -0.41
CUX2-201ENST00000261726 OR2H1Q9GZK4 316 aa12.51□□□□□ -0.41
CUX2-201ENST00000261726 MOB4Q9Y3A3 225 aa12.51□□□□□ -0.41
CUX2-201ENST00000261726 J3QR06 171 aa12.51□□□□□ -0.41
CUX2-201ENST00000261726 CCL4P13236 92 aa12.51□□□□□ -0.41
CUX2-201ENST00000261726 ZNF343Q6P1L6 599 aa12.51□□□□□ -0.41
CUX2-201ENST00000261726 PAXXQ9BUH6 204 aa12.51□□□□□ -0.41
CUX2-201ENST00000261726 RAB33BQ9H082 229 aa12.51□□□□□ -0.41
CUX2-201ENST00000261726 GHITMQ9H3K2 345 aa12.51□□□□□ -0.41
CUX2-201ENST00000261726 TCF21O43680 179 aa12.51□□□□□ -0.41
CUX2-201ENST00000261726 SS18L1O75177 396 aaPredicted RBP12.51□□□□□ -0.41
CUX2-201ENST00000261726 CD74P04233 296 aa12.51□□□□□ -0.41
CUX2-201ENST00000261726 ZNF735P0CB33 412 aa12.51□□□□□ -0.41
CUX2-201ENST00000261726 TFF2Q03403 129 aa12.51□□□□□ -0.41
CUX2-201ENST00000261726 LRRC75BQ2VPJ9 315 aa12.51□□□□□ -0.41
CUX2-201ENST00000261726 OR8G5Q8NG78 346 aa12.51□□□□□ -0.41
CUX2-201ENST00000261726 OR1L8Q8NGR8 309 aa12.51□□□□□ -0.41
CUX2-201ENST00000261726 WDFY2Q96P53 400 aa12.51□□□□□ -0.41
CUX2-201ENST00000261726 GZMHP20718 246 aa12.51□□□□□ -0.41
CUX2-201ENST00000261726 MAS1LP35410 378 aa12.51□□□□□ -0.41
CUX2-201ENST00000261726 GGTLC2Q14390 218 aa12.51□□□□□ -0.41
CUX2-201ENST00000261726 TMEM171Q8WVE6 324 aa12.51□□□□□ -0.41
CUX2-201ENST00000261726 CYB5R1Q9UHQ9 305 aa12.51□□□□□ -0.41
CUX2-201ENST00000261726 SMAGPQ0VAQ4 97 aa12.5□□□□□ -0.41
CUX2-201ENST00000261726 LBHQ53QV2 105 aaPredicted RBP12.5□□□□□ -0.41
CUX2-201ENST00000261726 ZNF738Q8NE65 137 aa12.5□□□□□ -0.41
CUX2-201ENST00000261726 METTL26Q96S19 204 aa12.5□□□□□ -0.41
CUX2-201ENST00000261726 RNF122Q9H9V4 155 aa12.5□□□□□ -0.41
CUX2-201ENST00000261726 TMEM189A5PLL7 270 aa12.5□□□□□ -0.41
CUX2-201ENST00000261726 H3BQ15 152 aa12.5□□□□□ -0.41
CUX2-201ENST00000261726 VDAC1P21796 283 aa12.5□□□□□ -0.41
CUX2-201ENST00000261726 GALP22466 123 aa12.5□□□□□ -0.41
CUX2-201ENST00000261726 NXPH1P58417 271 aa12.5□□□□□ -0.41
CUX2-201ENST00000261726 DNLZQ5SXM8 178 aa12.5□□□□□ -0.41
CUX2-201ENST00000261726 FAM216AQ8WUB2 273 aa12.5□□□□□ -0.41
CUX2-201ENST00000261726 NRTNQ99748 197 aa12.5□□□□□ -0.41
CUX2-201ENST00000261726 TMEM50BP56557 158 aa12.5□□□□□ -0.41
CUX2-201ENST00000261726 CD81P60033 236 aa12.5□□□□□ -0.41
CUX2-201ENST00000261726 IGSF11Q5DX21 431 aa12.5□□□□□ -0.41
CUX2-201ENST00000261726 FAM53AQ6NSI3 398 aaPredicted RBP12.5□□□□□ -0.41
CUX2-201ENST00000261726 OR10J6PQ8NGY7 276 aa12.5□□□□□ -0.41
CUX2-201ENST00000261726 CHODLQ9H9P2 273 aa12.5□□□□□ -0.41
CUX2-201ENST00000261726 TMEM38BQ9NVV0 291 aa12.5□□□□□ -0.41
CUX2-201ENST00000261726 LIPT2A6NK58 231 aa12.5□□□□□ -0.41
CUX2-201ENST00000261726 MGAT2Q10469 447 aa12.5□□□□□ -0.41
CUX2-201ENST00000261726 UCN2Q96RP3 112 aa12.5□□□□□ -0.41
CUX2-201ENST00000261726 KIAA1217Q5T5P2 1943 aa12.5□□□□□ -0.41
CUX2-201ENST00000261726 DOCK5Q9H7D0 1870 aa12.5□□□□□ -0.41
CUX2-201ENST00000261726 KCNE1BA0A087WTH5 132 aa12.5□□□□□ -0.41
CUX2-201ENST00000261726 HMSDA8MTL9 139 aa12.5□□□□□ -0.41
CUX2-201ENST00000261726 DIRC3C9JPN6 131 aa12.5□□□□□ -0.41
CUX2-201ENST00000261726 MMP9P14780 707 aa12.5□□□□□ -0.41
CUX2-201ENST00000261726 SCAND1P57086 179 aa12.5□□□□□ -0.41
CUX2-201ENST00000261726 OR4A47Q6IF82 309 aa12.5□□□□□ -0.41
CUX2-201ENST00000261726 WDFY1Q8IWB7 410 aa12.5□□□□□ -0.41
CUX2-201ENST00000261726 IGHV3-72A0A0B4J1Y9 119 aa12.49□□□□□ -0.41
CUX2-201ENST00000261726 MEGF10Q96KG7 1140 aa12.49□□□□□ -0.41
CUX2-201ENST00000261726 RAB24Q969Q5 203 aa12.49□□□□□ -0.41
CUX2-201ENST00000261726 TIMP4Q99727 224 aa12.49□□□□□ -0.41
CUX2-201ENST00000261726 GPR35Q9HC97 309 aa12.49□□□□□ -0.41
CUX2-201ENST00000261726 MDKP21741 143 aaPredicted RBP12.49□□□□□ -0.41
CUX2-201ENST00000261726 NEU3Q9UQ49 428 aa12.49□□□□□ -0.41
CUX2-201ENST00000261726 SIGIRRQ6IA17 410 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms