RNA–Protein interactions for RNA: ENST00000249806.10

CLN6-201, Transcript of CLN6, transmembrane ER protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN6, Length 2,243 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-201ENST00000249806 H0Y980 276 aa18.3■□□□□ 0.52
CLN6-201ENST00000249806 TSPAN4O14817 238 aa18.3■□□□□ 0.52
CLN6-201ENST00000249806 HAND1O96004 215 aa18.3■□□□□ 0.52
CLN6-201ENST00000249806 IGLV1-44P01699 117 aa18.3■□□□□ 0.52
CLN6-201ENST00000249806 IGLV2-14P01704 120 aa18.3■□□□□ 0.52
CLN6-201ENST00000249806 TFF1P04155 84 aa18.3■□□□□ 0.52
CLN6-201ENST00000249806 VDAC1P21796 283 aa18.3■□□□□ 0.52
CLN6-201ENST00000249806 BHLHA15Q7RTS1 189 aaPredicted RBP18.3■□□□□ 0.52
CLN6-201ENST00000249806 C11orf1Q9H5F2 150 aa18.3■□□□□ 0.52
CLN6-201ENST00000249806 DCHS1Q96JQ0 3298 aa18.3■□□□□ 0.52
CLN6-201ENST00000249806 IGHV2OR16-5A0A0B4J2B6 119 aa18.29■□□□□ 0.52
CLN6-201ENST00000249806 HSPA12AO43301 675 aa18.29■□□□□ 0.52
CLN6-201ENST00000249806 ADCYAP1P18509 176 aa18.29■□□□□ 0.52
CLN6-201ENST00000249806 PJVKQ0ZLH3 352 aa18.29■□□□□ 0.52
CLN6-201ENST00000249806 OR5D13Q8NGL4 314 aa18.29■□□□□ 0.52
CLN6-201ENST00000249806 HES4Q9HCC6 221 aa18.29■□□□□ 0.52
CLN6-201ENST00000249806 TAAR3PQ9P1P4 343 aa18.29■□□□□ 0.52
CLN6-201ENST00000249806 MBD3L4A6NDZ8 208 aaPredicted RBP18.29■□□□□ 0.52
CLN6-201ENST00000249806 MBD3L3A6NE82 208 aaPredicted RBP18.29■□□□□ 0.52
CLN6-201ENST00000249806 MBD3L5A6NJ08 208 aaPredicted RBP18.29■□□□□ 0.52
CLN6-201ENST00000249806 A6NLC8 198 aa18.29■□□□□ 0.52
CLN6-201ENST00000249806 SHEQ5VZ18 495 aa18.29■□□□□ 0.52
CLN6-201ENST00000249806 MBD3L2Q8NHZ7 208 aaPredicted RBP18.29■□□□□ 0.52
CLN6-201ENST00000249806 SPIN2AQ99865 258 aa18.29■□□□□ 0.52
CLN6-201ENST00000249806 SPIN2BQ9BPZ2 258 aa18.29■□□□□ 0.52
CLN6-201ENST00000249806 OR5H1A6NKK0 313 aa18.28■□□□□ 0.52
CLN6-201ENST00000249806 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP18.28■□□□□ 0.52
CLN6-201ENST00000249806 KLK10O43240 276 aa18.28■□□□□ 0.52
CLN6-201ENST00000249806 SSSCA1O60232 199 aa18.28■□□□□ 0.52
CLN6-201ENST00000249806 PSG2P11465 335 aa18.28■□□□□ 0.52
CLN6-201ENST00000249806 CAV2P51636 162 aa18.28■□□□□ 0.52
CLN6-201ENST00000249806 OR2C3Q8N628 320 aa18.28■□□□□ 0.52
CLN6-201ENST00000249806 BCL2L14Q9BZR8 327 aa18.28■□□□□ 0.52
CLN6-201ENST00000249806 ARV1Q9H2C2 271 aa18.28■□□□□ 0.52
CLN6-201ENST00000249806 CXXC4Q9H2H0 198 aa18.28■□□□□ 0.52
CLN6-201ENST00000249806 MBNL3Q9NUK0 354 aaKnown RBP18.28■□□□□ 0.52
CLN6-201ENST00000249806 PPP1R3CQ9UQK1 317 aa18.28■□□□□ 0.52
CLN6-201ENST00000249806 FAM96BQ9Y3D0 163 aa18.28■□□□□ 0.52
CLN6-201ENST00000249806 PTPRZ1P23471 2315 aaPredicted RBP18.28■□□□□ 0.52
CLN6-201ENST00000249806 DMXL2Q8TDJ6 3036 aa18.28■□□□□ 0.52
CLN6-201ENST00000249806 CHD3Q12873 2000 aaKnown RBP18.28■□□□□ 0.52
CLN6-201ENST00000249806 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP18.27■□□□□ 0.52
CLN6-201ENST00000249806 A0A0G2JRQ6 117 aa18.27■□□□□ 0.52
CLN6-201ENST00000249806 NPIPB11E5RHQ5 1161 aa18.27■□□□□ 0.52
CLN6-201ENST00000249806 EWSR1Q01844 656 aaKnown RBP eCLIP18.27■□□□□ 0.524e-6■□□□□ 10.4
CLN6-201ENST00000249806 P2RY6Q15077 328 aa18.27■□□□□ 0.52
CLN6-201ENST00000249806 ZNF718Q3SXZ3 478 aa18.27■□□□□ 0.52
CLN6-201ENST00000249806 Q6ZS92 163 aa18.27■□□□□ 0.52
CLN6-201ENST00000249806 MOB1BQ7L9L4 216 aa18.27■□□□□ 0.52
CLN6-201ENST00000249806 WIPI2Q9Y4P8 454 aa18.27■□□□□ 0.52
CLN6-201ENST00000249806 DIDO1Q9BTC0 2240 aaKnown RBP18.27■□□□□ 0.52
CLN6-201ENST00000249806 CLEC18AA5D8T8 446 aa18.27■□□□□ 0.52
CLN6-201ENST00000249806 AGPAT2O15120 278 aa18.27■□□□□ 0.52
CLN6-201ENST00000249806 KITLGP21583 273 aa18.27■□□□□ 0.52
CLN6-201ENST00000249806 S100GP29377 79 aa18.27■□□□□ 0.52
CLN6-201ENST00000249806 GCH1P30793 250 aa18.27■□□□□ 0.52
CLN6-201ENST00000249806 CEACAM6P40199 344 aa18.27■□□□□ 0.52
CLN6-201ENST00000249806 IL34Q6ZMJ4 242 aa18.27■□□□□ 0.52
CLN6-201ENST00000249806 CLEC18CQ8NCF0 446 aa18.27■□□□□ 0.52
CLN6-201ENST00000249806 TREM1Q9NP99 234 aa18.27■□□□□ 0.52
CLN6-201ENST00000249806 RBM7Q9Y580 266 aaKnown RBP18.27■□□□□ 0.52
CLN6-201ENST00000249806 IGSF23A1L1A6 192 aa18.26■□□□□ 0.51
CLN6-201ENST00000249806 NUDT19A8MXV4 375 aa18.26■□□□□ 0.51
CLN6-201ENST00000249806 ATG12O94817 140 aa18.26■□□□□ 0.51
CLN6-201ENST00000249806 HEXAP06865 529 aa18.26■□□□□ 0.51
CLN6-201ENST00000249806 ACAA1P09110 424 aaPredicted RBP18.26■□□□□ 0.51
CLN6-201ENST00000249806 OR8U9P0C7N5 309 aa18.26■□□□□ 0.51
CLN6-201ENST00000249806 OMGP23515 440 aa18.26■□□□□ 0.51
CLN6-201ENST00000249806 IZUMO4Q1ZYL8 232 aa18.26■□□□□ 0.51
CLN6-201ENST00000249806 WDR82Q6UXN9 313 aa18.26■□□□□ 0.51
CLN6-201ENST00000249806 Q6ZRG5 221 aa18.26■□□□□ 0.51
CLN6-201ENST00000249806 BEND4Q6ZU67 534 aa18.26■□□□□ 0.51
CLN6-201ENST00000249806 OR8U1Q8NH10 309 aa18.26■□□□□ 0.51
CLN6-201ENST00000249806 SH3BGRL3Q9H299 93 aa18.26■□□□□ 0.51
CLN6-201ENST00000249806 FAM215AQ9Y5M1 114 aa18.26■□□□□ 0.51
CLN6-201ENST00000249806 SLC25A15Q9Y619 301 aa18.26■□□□□ 0.51
CLN6-201ENST00000249806 BORCS7-ASMTA0A0B4J1R7 106 aa18.26■□□□□ 0.51
CLN6-201ENST00000249806 DUXBA0A1W2PPF3 345 aa18.26■□□□□ 0.51
CLN6-201ENST00000249806 C1QTNF9BB2RNN3 333 aa18.26■□□□□ 0.51
CLN6-201ENST00000249806 TMEM50AO95807 157 aa18.26■□□□□ 0.51
CLN6-201ENST00000249806 ID3Q02535 119 aa18.26■□□□□ 0.51
CLN6-201ENST00000249806 AESQ08117 197 aa18.26■□□□□ 0.51
CLN6-201ENST00000249806 BTNL8Q6UX41 500 aa18.26■□□□□ 0.51
CLN6-201ENST00000249806 ANKRD11Q6UB99 2663 aaPredicted RBP18.26■□□□□ 0.51
CLN6-201ENST00000249806 LOC105371267A0A1B0GV96 52 aa18.25■□□□□ 0.51
CLN6-201ENST00000249806 SERPINE2P07093 398 aa18.25■□□□□ 0.51
CLN6-201ENST00000249806 EPHA1P21709 976 aa18.25■□□□□ 0.51
CLN6-201ENST00000249806 BLOC1S1P78537 153 aa18.25■□□□□ 0.51
CLN6-201ENST00000249806 HMGN3Q15651 99 aa18.25■□□□□ 0.51
CLN6-201ENST00000249806 GUCA2BQ16661 112 aa18.25■□□□□ 0.51
CLN6-201ENST00000249806 ZNF474Q6S9Z5 364 aaPredicted RBP18.25■□□□□ 0.51
CLN6-201ENST00000249806 FIP1L1Q6UN15 594 aaKnown RBP18.25■□□□□ 0.51
CLN6-201ENST00000249806 RBMXL3Q8N7X1 1067 aaKnown RBP18.25■□□□□ 0.51
CLN6-201ENST00000249806 HSD17B11Q8NBQ5 300 aa18.25■□□□□ 0.51
CLN6-201ENST00000249806 TSNAXQ99598 290 aaKnown RBP18.25■□□□□ 0.51
CLN6-201ENST00000249806 GINS3Q9BRX5 216 aa18.25■□□□□ 0.51
CLN6-201ENST00000249806 MUC1P15941 1255 aaPredicted RBP18.25■□□□□ 0.51
CLN6-201ENST00000249806 PVALBP20472 110 aaPredicted RBP18.25■□□□□ 0.51
CLN6-201ENST00000249806 LMO1P25800 156 aa18.25■□□□□ 0.51
CLN6-201ENST00000249806 ZNF273Q14593 569 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms