RNA–Protein interactions for RNA: ENST00000248668.4

LRFN1-201, Transcript of leucine rich repeat and fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1-201ENST00000248668 RCC2Q9P258 522 aaKnown RBP13.4□□□□□ -0.26
LRFN1-201ENST00000248668 ZDHHC8Q9ULC8 765 aa13.4□□□□□ -0.26
LRFN1-201ENST00000248668 MPC1Q9Y5U8 109 aa13.4□□□□□ -0.26
LRFN1-201ENST00000248668 TRDCB7Z8K6 153 aa13.4□□□□□ -0.26
LRFN1-201ENST00000248668 TGFBR3Q03167 851 aa13.4□□□□□ -0.26
LRFN1-201ENST00000248668 IZUMO4Q1ZYL8 232 aa13.4□□□□□ -0.26
LRFN1-201ENST00000248668 MPV17LQ2QL34 196 aa13.4□□□□□ -0.26
LRFN1-201ENST00000248668 ZNF826PQ6ZT77 177 aa13.4□□□□□ -0.26
LRFN1-201ENST00000248668 ARL11Q969Q4 196 aa13.4□□□□□ -0.26
LRFN1-201ENST00000248668 OR51I2Q9H344 312 aa13.4□□□□□ -0.26
LRFN1-201ENST00000248668 OR1A1Q9P1Q5 309 aa13.4□□□□□ -0.26
LRFN1-201ENST00000248668 LPAR3Q9UBY5 353 aa13.4□□□□□ -0.26
LRFN1-201ENST00000248668 PCNX1Q96RV3 2341 aa13.4□□□□□ -0.26
LRFN1-201ENST00000248668 SMG1Q96Q15 3661 aaKnown RBP13.4□□□□□ -0.26
LRFN1-201ENST00000248668 EPHA1P21709 976 aa13.4□□□□□ -0.26
LRFN1-201ENST00000248668 MPV17P39210 176 aa13.4□□□□□ -0.26
LRFN1-201ENST00000248668 FAM214BQ7L5A3 538 aa13.4□□□□□ -0.26
LRFN1-201ENST00000248668 SAXO1Q8IYX7 474 aa13.4□□□□□ -0.26
LRFN1-201ENST00000248668 SCCPDHQ8NBX0 429 aa13.4□□□□□ -0.26
LRFN1-201ENST00000248668 WFDC1Q9HC57 220 aa13.4□□□□□ -0.26
LRFN1-201ENST00000248668 RFNGQ9Y644 331 aa13.4□□□□□ -0.26
LRFN1-201ENST00000248668 H7C1Q1 480 aa13.39□□□□□ -0.27
LRFN1-201ENST00000248668 CAV2P51636 162 aa13.39□□□□□ -0.27
LRFN1-201ENST00000248668 MST1LQ2TV78 715 aa13.39□□□□□ -0.27
LRFN1-201ENST00000248668 ADAM5Q6NVV9 412 aa13.39□□□□□ -0.27
LRFN1-201ENST00000248668 HSD17B11Q8NBQ5 300 aa13.39□□□□□ -0.27
LRFN1-201ENST00000248668 CLCF1Q9UBD9 225 aa13.39□□□□□ -0.27
LRFN1-201ENST00000248668 ANKRD11Q6UB99 2663 aaPredicted RBP13.39□□□□□ -0.27
LRFN1-201ENST00000248668 OR5B21A6NL26 309 aa13.39□□□□□ -0.27
LRFN1-201ENST00000248668 ADAM20O43506 726 aa13.39□□□□□ -0.27
LRFN1-201ENST00000248668 C1QL1O75973 258 aa13.39□□□□□ -0.27
LRFN1-201ENST00000248668 FBP1P09467 338 aa13.39□□□□□ -0.27
LRFN1-201ENST00000248668 FHITP49789 147 aa13.39□□□□□ -0.27
LRFN1-201ENST00000248668 GP6Q9HCN6 339 aa13.39□□□□□ -0.27
LRFN1-201ENST00000248668 OBP2BQ9NPH6 170 aa13.39□□□□□ -0.27
LRFN1-201ENST00000248668 ERRFI1Q9UJM3 462 aaPredicted RBP13.39□□□□□ -0.27
LRFN1-201ENST00000248668 ATP23Q9Y6H3 246 aa13.39□□□□□ -0.27
LRFN1-201ENST00000248668 UBE2CO00762 179 aa13.38□□□□□ -0.27
LRFN1-201ENST00000248668 NXPH2O95156 264 aa13.38□□□□□ -0.27
LRFN1-201ENST00000248668 DAOP14920 347 aa13.38□□□□□ -0.27
LRFN1-201ENST00000248668 F2RL1P55085 397 aa13.38□□□□□ -0.27
LRFN1-201ENST00000248668 UCP3P55916 312 aa13.38□□□□□ -0.27
LRFN1-201ENST00000248668 ZNF154Q13106 437 aa13.38□□□□□ -0.27
LRFN1-201ENST00000248668 TMEM222Q9H0R3 208 aa13.38□□□□□ -0.27
LRFN1-201ENST00000248668 TMEM100Q9NV29 134 aa13.38□□□□□ -0.27
LRFN1-201ENST00000248668 FAM90A10PA6NDY2 464 aa13.38□□□□□ -0.27
LRFN1-201ENST00000248668 FAM90A18PA6NE21 464 aa13.38□□□□□ -0.27
LRFN1-201ENST00000248668 FAM90A16PA6NEW6 464 aa13.38□□□□□ -0.27
LRFN1-201ENST00000248668 FAM24AA6NFZ4 105 aa13.38□□□□□ -0.27
LRFN1-201ENST00000248668 FAM90A20PA6NIJ5 464 aa13.38□□□□□ -0.27
LRFN1-201ENST00000248668 FAM90A8PA6NJQ4 464 aa13.38□□□□□ -0.27
LRFN1-201ENST00000248668 FAM90A7PA6NKC0 464 aa13.38□□□□□ -0.27
LRFN1-201ENST00000248668 FAM90A22PA8MWA6 464 aa13.38□□□□□ -0.27
LRFN1-201ENST00000248668 FAM90A12PA8MX19 464 aa13.38□□□□□ -0.27
LRFN1-201ENST00000248668 FAM90A5PA8MXJ8 464 aa13.38□□□□□ -0.27
LRFN1-201ENST00000248668 FAM90A23PA8MXZ1 464 aa13.38□□□□□ -0.27
LRFN1-201ENST00000248668 E5RGE8 158 aa13.38□□□□□ -0.27
LRFN1-201ENST00000248668 ST8SIA3O43173 380 aa13.38□□□□□ -0.27
LRFN1-201ENST00000248668 FAM90A15PP0C7V4 464 aa13.38□□□□□ -0.27
LRFN1-201ENST00000248668 FAM90A13PP0C7W8 464 aa13.38□□□□□ -0.27
LRFN1-201ENST00000248668 FAM90A14PP0C7W9 464 aa13.38□□□□□ -0.27
LRFN1-201ENST00000248668 FAM90A24PP0C7X0 464 aa13.38□□□□□ -0.27
LRFN1-201ENST00000248668 MUC1P15941 1255 aaPredicted RBP13.38□□□□□ -0.27
LRFN1-201ENST00000248668 PSG7Q13046 419 aa13.38□□□□□ -0.27
LRFN1-201ENST00000248668 CXorf66Q5JRM2 361 aaPredicted RBP13.38□□□□□ -0.27
LRFN1-201ENST00000248668 ZNF383Q8NA42 475 aa13.38□□□□□ -0.27
LRFN1-201ENST00000248668 PLPPR1Q8TBJ4 325 aa13.38□□□□□ -0.27
LRFN1-201ENST00000248668 RTL8AQ9BWD3 113 aa13.38□□□□□ -0.27
LRFN1-201ENST00000248668 SEBOXQ9HB31 216 aaPredicted RBP13.38□□□□□ -0.27
LRFN1-201ENST00000248668 UQCC1Q9NVA1 299 aa13.38□□□□□ -0.27
LRFN1-201ENST00000248668 NSG2Q9Y328 171 aa13.38□□□□□ -0.27
LRFN1-201ENST00000248668 RBM7Q9Y580 266 aaKnown RBP13.38□□□□□ -0.27
LRFN1-201ENST00000248668 AKAP6Q13023 2319 aa13.38□□□□□ -0.27
LRFN1-201ENST00000248668 KIR2DS1A0A191URI9 304 aa13.38□□□□□ -0.27
LRFN1-201ENST00000248668 J3QT63 122 aa13.38□□□□□ -0.27
LRFN1-201ENST00000248668 WNT9BO14905 357 aa13.38□□□□□ -0.27
LRFN1-201ENST00000248668 SSSCA1O60232 199 aa13.38□□□□□ -0.27
LRFN1-201ENST00000248668 KIR2DS4P43632 304 aa13.38□□□□□ -0.27
LRFN1-201ENST00000248668 FABP6P51161 128 aa13.38□□□□□ -0.27
LRFN1-201ENST00000248668 KIR2DS1Q14954 304 aa13.38□□□□□ -0.27
LRFN1-201ENST00000248668 UQCC3Q6UW78 93 aa13.38□□□□□ -0.27
LRFN1-201ENST00000248668 RNASE11Q8TAA1 199 aaKnown RBP13.38□□□□□ -0.27
LRFN1-201ENST00000248668 TCTEX1D2Q8WW35 142 aa13.38□□□□□ -0.27
LRFN1-201ENST00000248668 C20orf24Q9BUV8 137 aa13.38□□□□□ -0.27
LRFN1-201ENST00000248668 SH3BGRL3Q9H299 93 aa13.38□□□□□ -0.27
LRFN1-201ENST00000248668 OPA3Q9H6K4 179 aa13.38□□□□□ -0.27
LRFN1-201ENST00000248668 A6NLC8 198 aa13.37□□□□□ -0.27
LRFN1-201ENST00000248668 HSPA12AO43301 675 aa13.37□□□□□ -0.27
LRFN1-201ENST00000248668 OR2H2O95918 312 aa13.37□□□□□ -0.27
LRFN1-201ENST00000248668 ZNF16P17020 682 aaPredicted RBP13.37□□□□□ -0.27
LRFN1-201ENST00000248668 HOXC12P31275 282 aa13.37□□□□□ -0.27
LRFN1-201ENST00000248668 IL24Q13007 206 aa13.37□□□□□ -0.27
LRFN1-201ENST00000248668 MRPL49Q13405 166 aaKnown RBP13.37□□□□□ -0.27
LRFN1-201ENST00000248668 Q6ZRG5 221 aa13.37□□□□□ -0.27
LRFN1-201ENST00000248668 GTF3AQ92664 365 aaKnown RBP13.37□□□□□ -0.27
LRFN1-201ENST00000248668 hCG_1809904A0A1W2PP81 198 aa13.37□□□□□ -0.27
LRFN1-201ENST00000248668 A0A1W2PR64 198 aa13.37□□□□□ -0.27
LRFN1-201ENST00000248668 A0A1W2PRV1 198 aa13.37□□□□□ -0.27
LRFN1-201ENST00000248668 ZNF729A6NN14 1252 aaPredicted RBP13.37□□□□□ -0.27
LRFN1-201ENST00000248668 KIR2DL2P43627 348 aaPredicted RBP13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms