RNA–Protein interactions for RNA: ENST00000247003.8

DDX49-201, Transcript of DEAD-box helicase 49, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX49, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-201ENST00000247003 MKRN2OSH3BPM6 223 aa12.78□□□□□ -0.36
DDX49-201ENST00000247003 SSSCA1O60232 199 aa12.78□□□□□ -0.36
DDX49-201ENST00000247003 HOXD4P09016 255 aaPredicted RBP12.78□□□□□ -0.36
DDX49-201ENST00000247003 DEFA5Q01523 94 aa12.78□□□□□ -0.36
DDX49-201ENST00000247003 NMSQ5H8A3 153 aa12.78□□□□□ -0.36
DDX49-201ENST00000247003 TIMM23BQ5SRD1 257 aa12.78□□□□□ -0.36
DDX49-201ENST00000247003 PRAMEF6Q5VXH4 476 aa12.78□□□□□ -0.36
DDX49-201ENST00000247003 FAM180AQ6UWF9 173 aa12.78□□□□□ -0.36
DDX49-201ENST00000247003 SEM1Q6ZVN7 128 aa12.78□□□□□ -0.36
DDX49-201ENST00000247003 OR2C3Q8N628 320 aa12.78□□□□□ -0.36
DDX49-201ENST00000247003 LILRB1Q8NHL6 650 aaPredicted RBP12.78□□□□□ -0.36
DDX49-201ENST00000247003 MUCL1Q96DR8 90 aa12.78□□□□□ -0.36
DDX49-201ENST00000247003 GPHA2Q96T91 129 aa12.78□□□□□ -0.36
DDX49-201ENST00000247003 HRH4Q9H3N8 390 aa12.78□□□□□ -0.36
DDX49-201ENST00000247003 DCHS1Q96JQ0 3298 aa12.78□□□□□ -0.36
DDX49-201ENST00000247003 TRAV39A0A0B4J263 110 aa12.77□□□□□ -0.37
DDX49-201ENST00000247003 RNF212BA8MTL3 300 aa12.77□□□□□ -0.37
DDX49-201ENST00000247003 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.77□□□□□ -0.37
DDX49-201ENST00000247003 WNT2P09544 360 aa12.77□□□□□ -0.37
DDX49-201ENST00000247003 LMO1P25800 156 aa12.77□□□□□ -0.37
DDX49-201ENST00000247003 CEBPDP49716 269 aaPredicted RBP12.77□□□□□ -0.37
DDX49-201ENST00000247003 EWSR1Q01844 656 aaKnown RBP eCLIP12.77□□□□□ -0.37
DDX49-201ENST00000247003 PJVKQ0ZLH3 352 aa12.77□□□□□ -0.37
DDX49-201ENST00000247003 ZNF266Q14584 549 aa12.77□□□□□ -0.37
DDX49-201ENST00000247003 KRTCAP3Q53RY4 240 aa12.77□□□□□ -0.37
DDX49-201ENST00000247003 WDR82Q6UXN9 313 aa12.77□□□□□ -0.37
DDX49-201ENST00000247003 ACP7Q6ZNF0 438 aa12.77□□□□□ -0.37
DDX49-201ENST00000247003 ZNF826PQ6ZT77 177 aa12.77□□□□□ -0.37
DDX49-201ENST00000247003 DMBX1Q8NFW5 382 aa12.77□□□□□ -0.37
DDX49-201ENST00000247003 NINJ1Q92982 152 aa12.77□□□□□ -0.37
DDX49-201ENST00000247003 PLEKHF2Q9H8W4 249 aa12.77□□□□□ -0.37
DDX49-201ENST00000247003 MSL2Q9HCI7 577 aa12.77□□□□□ -0.37
DDX49-201ENST00000247003 PARP11Q9NR21 331 aa12.77□□□□□ -0.37
DDX49-201ENST00000247003 UFSP2Q9NUQ7 469 aa12.77□□□□□ -0.37
DDX49-201ENST00000247003 PTPRZ1P23471 2315 aaPredicted RBP12.77□□□□□ -0.37
DDX49-201ENST00000247003 OOEPA6NGQ2 149 aa12.76□□□□□ -0.37
DDX49-201ENST00000247003 M0R1B8 84 aa12.76□□□□□ -0.37
DDX49-201ENST00000247003 CRYAAP02489 173 aa12.76□□□□□ -0.37
DDX49-201ENST00000247003 SEC11BP0C7V7 166 aa12.76□□□□□ -0.37
DDX49-201ENST00000247003 MMP9P14780 707 aa12.76□□□□□ -0.37
DDX49-201ENST00000247003 TIMP3P35625 211 aa12.76□□□□□ -0.37
DDX49-201ENST00000247003 CEACAM6P40199 344 aa12.76□□□□□ -0.37
DDX49-201ENST00000247003 ZNF83P51522 516 aa12.76□□□□□ -0.37
DDX49-201ENST00000247003 F2RL1P55085 397 aa12.76□□□□□ -0.37
DDX49-201ENST00000247003 POLR2GP62487 172 aaKnown RBP eCLIP12.76□□□□□ -0.37
DDX49-201ENST00000247003 BTN1A1Q13410 526 aa12.76□□□□□ -0.37
DDX49-201ENST00000247003 SLC35E4Q6ICL7 350 aa12.76□□□□□ -0.37
DDX49-201ENST00000247003 ALKBH2Q6NS38 261 aa12.76□□□□□ -0.37
DDX49-201ENST00000247003 CLEC9AQ6UXN8 241 aa12.76□□□□□ -0.37
DDX49-201ENST00000247003 RBMXL3Q8N7X1 1067 aaKnown RBP12.76□□□□□ -0.37
DDX49-201ENST00000247003 PRR7Q8TB68 274 aa12.76□□□□□ -0.37
DDX49-201ENST00000247003 GALMQ96C23 342 aa12.76□□□□□ -0.37
DDX49-201ENST00000247003 LRRC46Q96FV0 321 aa12.76□□□□□ -0.37
DDX49-201ENST00000247003 SFXN3Q9BWM7 321 aa12.76□□□□□ -0.37
DDX49-201ENST00000247003 TREM1Q9NP99 234 aa12.76□□□□□ -0.37
DDX49-201ENST00000247003 WNT9BO14905 357 aa12.76□□□□□ -0.37
DDX49-201ENST00000247003 PSG2P11465 335 aa12.76□□□□□ -0.37
DDX49-201ENST00000247003 SLC25A6P12236 298 aa12.76□□□□□ -0.37
DDX49-201ENST00000247003 IL2RGP31785 369 aa12.76□□□□□ -0.37
DDX49-201ENST00000247003 GABRA2P47869 451 aa12.76□□□□□ -0.37
DDX49-201ENST00000247003 TESK1Q15569 626 aa12.76□□□□□ -0.37
DDX49-201ENST00000247003 Q6ZR03 302 aa12.76□□□□□ -0.37
DDX49-201ENST00000247003 Q6ZRG5 221 aa12.76□□□□□ -0.37
DDX49-201ENST00000247003 S100PBPQ96BU1 408 aa12.76□□□□□ -0.37
DDX49-201ENST00000247003 GINS3Q9BRX5 216 aa12.76□□□□□ -0.37
DDX49-201ENST00000247003 LYRM2Q9NU23 88 aaPredicted RBP12.76□□□□□ -0.37
DDX49-201ENST00000247003 ZDHHC8Q9ULC8 765 aa12.76□□□□□ -0.37
DDX49-201ENST00000247003 PPP1R3CQ9UQK1 317 aa12.76□□□□□ -0.37
DDX49-201ENST00000247003 FAM215AQ9Y5M1 114 aa12.76□□□□□ -0.37
DDX49-201ENST00000247003 A0A1B0GU03 582 aa12.75□□□□□ -0.37
DDX49-201ENST00000247003 TMEM218A2RU14 115 aa12.75□□□□□ -0.37
DDX49-201ENST00000247003 IFNL4K9M1U5 179 aa12.75□□□□□ -0.37
DDX49-201ENST00000247003 PSPNO60542 156 aa12.75□□□□□ -0.37
DDX49-201ENST00000247003 EPHA1P21709 976 aa12.75□□□□□ -0.37
DDX49-201ENST00000247003 AKR1C2P52895 323 aa12.75□□□□□ -0.37
DDX49-201ENST00000247003 NHLH2Q02577 135 aa12.75□□□□□ -0.37
DDX49-201ENST00000247003 C3orf36Q3SXR2 165 aa12.75□□□□□ -0.37
DDX49-201ENST00000247003 C11orf53Q8IXP5 236 aa12.75□□□□□ -0.37
DDX49-201ENST00000247003 OR2Z1Q8NG97 314 aa12.75□□□□□ -0.37
DDX49-201ENST00000247003 TSNAXQ99598 290 aaKnown RBP12.75□□□□□ -0.37
DDX49-201ENST00000247003 ARV1Q9H2C2 271 aa12.75□□□□□ -0.37
DDX49-201ENST00000247003 LUZP4Q9P127 313 aa12.75□□□□□ -0.37
DDX49-201ENST00000247003 DUSP13Q9UII6 198 aa12.75□□□□□ -0.37
DDX49-201ENST00000247003 CEP250Q9BV73 2442 aa12.75□□□□□ -0.37
DDX49-201ENST00000247003 PITX3O75364 302 aa12.74□□□□□ -0.37
DDX49-201ENST00000247003 OR8U9P0C7N5 309 aa12.74□□□□□ -0.37
DDX49-201ENST00000247003 ZNF16P17020 682 aaPredicted RBP12.74□□□□□ -0.37
DDX49-201ENST00000247003 CD200P41217 278 aa12.74□□□□□ -0.37
DDX49-201ENST00000247003 LPAR6P43657 344 aa12.74□□□□□ -0.37
DDX49-201ENST00000247003 RAB5CP51148 216 aa12.74□□□□□ -0.37
DDX49-201ENST00000247003 BAXQ07812 192 aa12.74□□□□□ -0.37
DDX49-201ENST00000247003 SPAG16Q8N0X2 631 aa12.74□□□□□ -0.37
DDX49-201ENST00000247003 SVBPQ8N300 66 aa12.74□□□□□ -0.37
DDX49-201ENST00000247003 OR8U1Q8NH10 309 aa12.74□□□□□ -0.37
DDX49-201ENST00000247003 UBALD1Q8TB05 177 aa12.74□□□□□ -0.37
DDX49-201ENST00000247003 FAM57AQ8TBR7 257 aa12.74□□□□□ -0.37
DDX49-201ENST00000247003 LRRC29Q8WV35 223 aa12.74□□□□□ -0.37
DDX49-201ENST00000247003 MS4A7Q9GZW8 240 aaPredicted RBP12.74□□□□□ -0.37
DDX49-201ENST00000247003 MAGT1Q9H0U3 335 aa12.74□□□□□ -0.37
DDX49-201ENST00000247003 WASF3Q9UPY6 502 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms