RNA–Protein interactions for RNA: ENST00000233242.5

APOB-201, Transcript of apolipoprotein B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOB, Length 14,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-201ENST00000233242 FREM3P0C091 2139 aa7.22□□□□□ -1.25
APOB-201ENST00000233242 LIPT2A6NK58 231 aa7.21□□□□□ -1.25
APOB-201ENST00000233242 DNPH1O43598 174 aa7.21□□□□□ -1.25
APOB-201ENST00000233242 ROM1Q03395 351 aa7.21□□□□□ -1.25
APOB-201ENST00000233242 A0A0U1RQV5 110 aa7.21□□□□□ -1.25
APOB-201ENST00000233242 IFI6P09912 130 aa7.21□□□□□ -1.25
APOB-201ENST00000233242 C10orf113Q5VZT2 155 aa7.21□□□□□ -1.25
APOB-201ENST00000233242 PQLC2Q6ZP29 291 aa7.21□□□□□ -1.25
APOB-201ENST00000233242 OR4D11Q8NGI4 311 aa7.21□□□□□ -1.25
APOB-201ENST00000233242 GPR132Q9UNW8 380 aa7.21□□□□□ -1.25
APOB-201ENST00000233242 NHSQ6T4R5 1651 aa7.21□□□□□ -1.25
APOB-201ENST00000233242 ZNF32P17041 273 aa7.21□□□□□ -1.25
APOB-201ENST00000233242 GUCD1Q96NT3 240 aa7.21□□□□□ -1.25
APOB-201ENST00000233242 FOCADQ5VW36 1801 aa7.21□□□□□ -1.25
APOB-201ENST00000233242 DOCK11Q5JSL3 2073 aa7.21□□□□□ -1.25
APOB-201ENST00000233242 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.21□□□□□ -1.25
APOB-201ENST00000233242 A0A1W2PPC1 479 aa7.21□□□□□ -1.25
APOB-201ENST00000233242 FAM90A10PA6NDY2 464 aa7.21□□□□□ -1.25
APOB-201ENST00000233242 FAM90A18PA6NE21 464 aa7.21□□□□□ -1.25
APOB-201ENST00000233242 FAM90A16PA6NEW6 464 aa7.21□□□□□ -1.25
APOB-201ENST00000233242 FAM90A20PA6NIJ5 464 aa7.21□□□□□ -1.25
APOB-201ENST00000233242 FAM90A8PA6NJQ4 464 aa7.21□□□□□ -1.25
APOB-201ENST00000233242 FAM90A7PA6NKC0 464 aa7.21□□□□□ -1.25
APOB-201ENST00000233242 FAM90A22PA8MWA6 464 aa7.21□□□□□ -1.25
APOB-201ENST00000233242 FAM90A12PA8MX19 464 aa7.21□□□□□ -1.25
APOB-201ENST00000233242 FAM90A5PA8MXJ8 464 aa7.21□□□□□ -1.25
APOB-201ENST00000233242 FAM90A23PA8MXZ1 464 aa7.21□□□□□ -1.25
APOB-201ENST00000233242 FAM90A15PP0C7V4 464 aa7.21□□□□□ -1.25
APOB-201ENST00000233242 FAM90A13PP0C7W8 464 aa7.21□□□□□ -1.25
APOB-201ENST00000233242 FAM90A14PP0C7W9 464 aa7.21□□□□□ -1.25
APOB-201ENST00000233242 FAM90A24PP0C7X0 464 aa7.21□□□□□ -1.25
APOB-201ENST00000233242 CYB5R2Q6BCY4 276 aa7.21□□□□□ -1.25
APOB-201ENST00000233242 FBXO46Q6PJ61 603 aaPredicted RBP7.21□□□□□ -1.25
APOB-201ENST00000233242 TTC32Q5I0X7 151 aa7.21□□□□□ -1.26
APOB-201ENST00000233242 LYG1Q8N1E2 194 aa7.21□□□□□ -1.26
APOB-201ENST00000233242 LIPFP07098 398 aa7.21□□□□□ -1.26
APOB-201ENST00000233242 PMELP40967 661 aa7.21□□□□□ -1.26
APOB-201ENST00000233242 UFC1Q9Y3C8 167 aa7.21□□□□□ -1.26
APOB-201ENST00000233242 LOC102724200A0A096LPH7 203 aaPredicted RBP7.21□□□□□ -1.26
APOB-201ENST00000233242 TGIF2LYQ8IUE0 185 aa7.21□□□□□ -1.26
APOB-201ENST00000233242 TGIF2-C20orf24A0A0A6YYL0 155 aa7.21□□□□□ -1.26
APOB-201ENST00000233242 NPY1RP25929 384 aa7.21□□□□□ -1.26
APOB-201ENST00000233242 SSMEM1Q8WWF3 244 aa7.21□□□□□ -1.26
APOB-201ENST00000233242 ALG14Q96F25 216 aa7.21□□□□□ -1.26
APOB-201ENST00000233242 SH3BGRL2Q9UJC5 107 aa7.21□□□□□ -1.26
APOB-201ENST00000233242 METAP1P53582 386 aa7.21□□□□□ -1.26
APOB-201ENST00000233242 PRRX1P54821 245 aa7.21□□□□□ -1.26
APOB-201ENST00000233242 VN1R4Q7Z5H5 301 aa7.21□□□□□ -1.26
APOB-201ENST00000233242 SHANK1Q9Y566 2161 aa7.21□□□□□ -1.26
APOB-201ENST00000233242 KBTBD11O94819 623 aa7.21□□□□□ -1.26
APOB-201ENST00000233242 LIMS1P48059 325 aa7.21□□□□□ -1.26
APOB-201ENST00000233242 APCDD1LQ8NCL9 501 aa7.21□□□□□ -1.26
APOB-201ENST00000233242 OR1B1Q8NGR6 318 aa7.21□□□□□ -1.26
APOB-201ENST00000233242 MRGPRFQ96AM1 343 aa7.21□□□□□ -1.26
APOB-201ENST00000233242 TRAV9-1A0A075B6T8 112 aa7.21□□□□□ -1.26
APOB-201ENST00000233242 MYOGP15173 224 aa7.21□□□□□ -1.26
APOB-201ENST00000233242 TM4SF4P48230 202 aa7.21□□□□□ -1.26
APOB-201ENST00000233242 WDR25Q64LD2 544 aaPredicted RBP7.21□□□□□ -1.26
APOB-201ENST00000233242 GBGT1Q8N5D6 347 aa7.21□□□□□ -1.26
APOB-201ENST00000233242 RNF122Q9H9V4 155 aa7.21□□□□□ -1.26
APOB-201ENST00000233242 RAC3P60763 192 aa7.2□□□□□ -1.26
APOB-201ENST00000233242 ZNF506Q5JVG8 444 aa7.2□□□□□ -1.26
APOB-201ENST00000233242 RSPO2Q6UXX9 243 aaPredicted RBP7.2□□□□□ -1.26
APOB-201ENST00000233242 OR10S1Q8NGN2 331 aa7.2□□□□□ -1.26
APOB-201ENST00000233242 TRBV5-7A0A0A0MS05 114 aa7.2□□□□□ -1.26
APOB-201ENST00000233242 F5H697 171 aa7.2□□□□□ -1.26
APOB-201ENST00000233242 H0Y8X5 98 aa7.2□□□□□ -1.26
APOB-201ENST00000233242 H3BVH4 76 aa7.2□□□□□ -1.26
APOB-201ENST00000233242 HKR1P10072 659 aa7.2□□□□□ -1.26
APOB-201ENST00000233242 H2BFSP57053 126 aa7.2□□□□□ -1.26
APOB-201ENST00000233242 SPNS3Q6ZMD2 512 aa7.2□□□□□ -1.26
APOB-201ENST00000233242 PGLYRP3Q96LB9 341 aa7.2□□□□□ -1.26
APOB-201ENST00000233242 SPTY2D1-AS1A0A0U1RR47 76 aa7.2□□□□□ -1.26
APOB-201ENST00000233242 YBX1P67809 324 aaKnown RBP7.2□□□□□ -1.26
APOB-201ENST00000233242 NDUFAF3Q9BU61 184 aa7.2□□□□□ -1.26
APOB-201ENST00000233242 C19orf24Q9BVV8 132 aa7.2□□□□□ -1.26
APOB-201ENST00000233242 FAM206AQ9NX38 181 aa7.2□□□□□ -1.26
APOB-201ENST00000233242 A0A1W2PPC4 97 aa7.2□□□□□ -1.26
APOB-201ENST00000233242 TMEM210A6NLX4 147 aa7.2□□□□□ -1.26
APOB-201ENST00000233242 LINC01555Q8NAE3 123 aa7.2□□□□□ -1.26
APOB-201ENST00000233242 CXXC4Q9H2H0 198 aa7.2□□□□□ -1.26
APOB-201ENST00000233242 C6orf106Q9H6K1 298 aaPredicted RBP7.2□□□□□ -1.26
APOB-201ENST00000233242 YBX2Q9Y2T7 364 aaKnown RBP7.2□□□□□ -1.26
APOB-201ENST00000233242 M0R3E3 92 aa7.2□□□□□ -1.26
APOB-201ENST00000233242 LEPROTL1O95214 131 aa7.2□□□□□ -1.26
APOB-201ENST00000233242 TMIGD3P0DMS9 266 aaPredicted RBP7.2□□□□□ -1.26
APOB-201ENST00000233242 OR1L8Q8NGR8 309 aa7.2□□□□□ -1.26
APOB-201ENST00000233242 NPTNQ9Y639 398 aa7.2□□□□□ -1.26
APOB-201ENST00000233242 ABCA3Q99758 1704 aa7.2□□□□□ -1.26
APOB-201ENST00000233242 NDUFB3O43676 98 aa7.2□□□□□ -1.26
APOB-201ENST00000233242 ISG15P05161 165 aa7.2□□□□□ -1.26
APOB-201ENST00000233242 CD1BP29016 333 aa7.2□□□□□ -1.26
APOB-201ENST00000233242 BHLHA9Q7RTU4 235 aa7.2□□□□□ -1.26
APOB-201ENST00000233242 SLC25A38Q96DW6 304 aa7.2□□□□□ -1.26
APOB-201ENST00000233242 RPL36A-HNRNPH2H7BZ11 118 aa7.2□□□□□ -1.26
APOB-201ENST00000233242 J3QT63 122 aa7.2□□□□□ -1.26
APOB-201ENST00000233242 EFNB2P52799 333 aa7.2□□□□□ -1.26
APOB-201ENST00000233242 SELENOTP62341 195 aa7.2□□□□□ -1.26
APOB-201ENST00000233242 JOSD1Q15040 202 aaPredicted RBP7.2□□□□□ -1.26
APOB-201ENST00000233242 RTN4RL1Q86UN2 441 aaPredicted RBP7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms