RNA–Protein interactions for RNA: ENST00000222275.2

UPK1A-201, Transcript of uroplakin 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPK1A, Length 1,223 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1A-201ENST00000222275 FAM25AB3EWG3 89 aa11.14□□□□□ -0.63
UPK1A-201ENST00000222275 FAM25CB3EWG5 89 aa11.14□□□□□ -0.63
UPK1A-201ENST00000222275 FAM25GB3EWG6 89 aa11.14□□□□□ -0.63
UPK1A-201ENST00000222275 NPIPB11E5RHQ5 1161 aa11.14□□□□□ -0.63
UPK1A-201ENST00000222275 RGS5O15539 181 aa11.14□□□□□ -0.63
UPK1A-201ENST00000222275 GNB3P16520 340 aa11.14□□□□□ -0.63
UPK1A-201ENST00000222275 CDK2P24941 298 aa11.14□□□□□ -0.63
UPK1A-201ENST00000222275 FPR2P25090 351 aa11.14□□□□□ -0.63
UPK1A-201ENST00000222275 UBE2E1P51965 193 aa11.14□□□□□ -0.63
UPK1A-201ENST00000222275 GNG2P59768 71 aa11.14□□□□□ -0.63
UPK1A-201ENST00000222275 SRSF7Q16629 238 aaKnown RBP eCLIP11.14□□□□□ -0.63
UPK1A-201ENST00000222275 ZNF260Q3ZCT1 412 aa11.14□□□□□ -0.63
UPK1A-201ENST00000222275 TCF23Q7RTU1 214 aa11.14□□□□□ -0.63
UPK1A-201ENST00000222275 C11orf42Q8N5U0 333 aa11.14□□□□□ -0.63
UPK1A-201ENST00000222275 OR52M1Q8NGK5 317 aa11.14□□□□□ -0.63
UPK1A-201ENST00000222275 MCFD2Q8NI22 146 aa11.14□□□□□ -0.63
UPK1A-201ENST00000222275 ZFAND2BQ8WV99 257 aa11.14□□□□□ -0.63
UPK1A-201ENST00000222275 DYRK2Q92630 601 aa11.14□□□□□ -0.63
UPK1A-201ENST00000222275 ARL11Q969Q4 196 aa11.14□□□□□ -0.63
UPK1A-201ENST00000222275 MMP27Q9H306 513 aa11.14□□□□□ -0.63
UPK1A-201ENST00000222275 SIRT7Q9NRC8 400 aa11.14□□□□□ -0.63
UPK1A-201ENST00000222275 IDI2-AS1Q9NZ38 188 aa11.14□□□□□ -0.63
UPK1A-201ENST00000222275 KIAA2026Q5HYC2 2103 aa11.14□□□□□ -0.63
UPK1A-201ENST00000222275 MEGF8Q7Z7M0 2845 aa11.13□□□□□ -0.63
UPK1A-201ENST00000222275 MDFIC2A0A1B0GVS7 189 aa11.13□□□□□ -0.63
UPK1A-201ENST00000222275 MELTFP08582 738 aa11.13□□□□□ -0.63
UPK1A-201ENST00000222275 DTYMKP23919 212 aa11.13□□□□□ -0.63
UPK1A-201ENST00000222275 KIR2DS4P43632 304 aa11.13□□□□□ -0.63
UPK1A-201ENST00000222275 CBX5P45973 191 aa11.13□□□□□ -0.63
UPK1A-201ENST00000222275 UBA52P62987 128 aaKnown RBP11.13□□□□□ -0.63
UPK1A-201ENST00000222275 KIR2DS1Q14954 304 aa11.13□□□□□ -0.63
UPK1A-201ENST00000222275 C17orf58Q2M2W7 97 aa11.13□□□□□ -0.63
UPK1A-201ENST00000222275 Q3ZCU0 254 aa11.13□□□□□ -0.63
UPK1A-201ENST00000222275 ZNF880Q6PDB4 577 aa11.13□□□□□ -0.63
UPK1A-201ENST00000222275 BAIAP2L2Q6UXY1 529 aa11.13□□□□□ -0.63
UPK1A-201ENST00000222275 SETD6Q8TBK2 473 aa11.13□□□□□ -0.63
UPK1A-201ENST00000222275 LHX4Q969G2 390 aa11.13□□□□□ -0.63
UPK1A-201ENST00000222275 CREB3L1Q96BA8 519 aa11.13□□□□□ -0.63
UPK1A-201ENST00000222275 GALMQ96C23 342 aa11.13□□□□□ -0.63
UPK1A-201ENST00000222275 SLIRPQ9GZT3 109 aaKnown RBP11.13□□□□□ -0.63
UPK1A-201ENST00000222275 C6orf62Q9GZU0 229 aaPredicted RBP11.13□□□□□ -0.63
UPK1A-201ENST00000222275 MS4A7Q9GZW8 240 aaPredicted RBP11.13□□□□□ -0.63
UPK1A-201ENST00000222275 TMEM133Q9H2Q1 129 aa11.13□□□□□ -0.63
UPK1A-201ENST00000222275 KCNK7Q9Y2U2 307 aa11.13□□□□□ -0.63
UPK1A-201ENST00000222275 A0A087X0M5 115 aa11.12□□□□□ -0.63
UPK1A-201ENST00000222275 TRAV40A0A0B4J280 105 aa11.12□□□□□ -0.63
UPK1A-201ENST00000222275 IGHV1-69DA0A0B4J2H0 117 aa11.12□□□□□ -0.63
UPK1A-201ENST00000222275 CENPVL3A0A0U1RRI6 287 aa11.12□□□□□ -0.63
UPK1A-201ENST00000222275 A0A1B0GX30 115 aa11.12□□□□□ -0.63
UPK1A-201ENST00000222275 C12orf77C9JDV5 145 aa11.12□□□□□ -0.63
UPK1A-201ENST00000222275 HPGDSO60760 199 aa11.12□□□□□ -0.63
UPK1A-201ENST00000222275 RGS11O94810 467 aa11.12□□□□□ -0.63
UPK1A-201ENST00000222275 IGHV1-69P01742 117 aa11.12□□□□□ -0.63
UPK1A-201ENST00000222275 RCC1P18754 421 aaPredicted RBP11.12□□□□□ -0.63
UPK1A-201ENST00000222275 ELK1P19419 428 aa11.12□□□□□ -0.63
UPK1A-201ENST00000222275 S100A5P33763 92 aa11.12□□□□□ -0.63
UPK1A-201ENST00000222275 COMPP49747 757 aaPredicted RBP11.12□□□□□ -0.63
UPK1A-201ENST00000222275 PRRX1P54821 245 aa11.12□□□□□ -0.63
UPK1A-201ENST00000222275 LGALS4P56470 323 aa11.12□□□□□ -0.63
UPK1A-201ENST00000222275 HTD2P86397 168 aa11.12□□□□□ -0.63
UPK1A-201ENST00000222275 MIDNQ504T8 468 aa11.12□□□□□ -0.63
UPK1A-201ENST00000222275 STEAP3Q658P3 488 aa11.12□□□□□ -0.63
UPK1A-201ENST00000222275 C9orf139Q6ZV77 190 aa11.12□□□□□ -0.63
UPK1A-201ENST00000222275 OR11H6Q8NGC7 330 aa11.12□□□□□ -0.63
UPK1A-201ENST00000222275 ZNF596Q8TC21 504 aa11.12□□□□□ -0.63
UPK1A-201ENST00000222275 TNFRSF14Q92956 283 aa11.12□□□□□ -0.63
UPK1A-201ENST00000222275 KIRREL1Q96J84 757 aa11.12□□□□□ -0.63
UPK1A-201ENST00000222275 DCUN1D5Q9BTE7 237 aa11.12□□□□□ -0.63
UPK1A-201ENST00000222275 SUCNR1Q9BXA5 334 aa11.12□□□□□ -0.63
UPK1A-201ENST00000222275 CLEC7AQ9BXN2 247 aa11.12□□□□□ -0.63
UPK1A-201ENST00000222275 NXF2Q9GZY0 626 aaKnown RBP11.12□□□□□ -0.63
UPK1A-201ENST00000222275 AUNIPQ9H7T9 357 aa11.12□□□□□ -0.63
UPK1A-201ENST00000222275 ZMAT3Q9HA38 289 aaKnown RBP11.12□□□□□ -0.63
UPK1A-201ENST00000222275 TAF9BQ9HBM6 251 aa11.12□□□□□ -0.63
UPK1A-201ENST00000222275 Q9N2K0 584 aa11.12□□□□□ -0.63
UPK1A-201ENST00000222275 MEX3AA1L020 520 aaKnown RBP11.11□□□□□ -0.63
UPK1A-201ENST00000222275 TMEM235A6NFC5 223 aa11.11□□□□□ -0.63
UPK1A-201ENST00000222275 A6NHS1 94 aa11.11□□□□□ -0.63
UPK1A-201ENST00000222275 TRDCB7Z8K6 153 aa11.11□□□□□ -0.63
UPK1A-201ENST00000222275 RNASEK-C17orf49H0YIS7 233 aa11.11□□□□□ -0.63
UPK1A-201ENST00000222275 C15orf65H3BRN8 121 aa11.11□□□□□ -0.63
UPK1A-201ENST00000222275 F2RL2O00254 374 aa11.11□□□□□ -0.63
UPK1A-201ENST00000222275 TOR1AO14656 332 aa11.11□□□□□ -0.63
UPK1A-201ENST00000222275 DIRAS3O95661 229 aa11.11□□□□□ -0.63
UPK1A-201ENST00000222275 EIF4EP06730 217 aaKnown RBP11.11□□□□□ -0.63
UPK1A-201ENST00000222275 CD34P28906 385 aa11.11□□□□□ -0.63
UPK1A-201ENST00000222275 SSTR5P35346 364 aa11.11□□□□□ -0.63
UPK1A-201ENST00000222275 TAS2R20P59543 309 aa11.11□□□□□ -0.63
UPK1A-201ENST00000222275 HMGN3Q15651 99 aa11.11□□□□□ -0.63
UPK1A-201ENST00000222275 PRAMEF5Q5TYX0 476 aa11.11□□□□□ -0.63
UPK1A-201ENST00000222275 BRD3OSQ6XYD6 125 aa11.11□□□□□ -0.63
UPK1A-201ENST00000222275 ZNF782Q6ZMW2 699 aaPredicted RBP11.11□□□□□ -0.63
UPK1A-201ENST00000222275 Q6ZS49 121 aa11.11□□□□□ -0.63
UPK1A-201ENST00000222275 RFESDQ8TAC1 157 aa11.11□□□□□ -0.63
UPK1A-201ENST00000222275 SCPEP1Q9HB40 452 aa11.11□□□□□ -0.63
UPK1A-201ENST00000222275 EXTL2Q9UBQ6 330 aa11.11□□□□□ -0.63
UPK1A-201ENST00000222275 TRAV39A0A0B4J263 110 aa11.1□□□□□ -0.63
UPK1A-201ENST00000222275 DNAJC9-AS1A6NH13 148 aa11.1□□□□□ -0.63
UPK1A-201ENST00000222275 TRIM77I1YAP6 450 aa11.1□□□□□ -0.63
UPK1A-201ENST00000222275 SDCBPO00560 298 aaPredicted RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms