RNA–Protein interactions for RNA: ENST00000217402.2

CHMP4B-201, Transcript of charged multivesicular body protein 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4B, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4B-201ENST00000217402 IL1F10Q8WWZ1 152 aa22.35■■□□□ 1.17
CHMP4B-201ENST00000217402 KIRREL1Q96J84 757 aa22.35■■□□□ 1.17
CHMP4B-201ENST00000217402 TMPRSS13Q9BYE2 586 aa22.35■■□□□ 1.17
CHMP4B-201ENST00000217402 KLK11Q9UBX7 282 aa22.35■■□□□ 1.17
CHMP4B-201ENST00000217402 AUP1Q9Y679 476 aa22.35■■□□□ 1.17
CHMP4B-201ENST00000217402 hCG_1809904A0A1W2PP81 198 aa22.34■■□□□ 1.17
CHMP4B-201ENST00000217402 A0A1W2PPE2 198 aa22.34■■□□□ 1.17
CHMP4B-201ENST00000217402 A0A1W2PR64 198 aa22.34■■□□□ 1.17
CHMP4B-201ENST00000217402 A0A1W2PRV1 198 aa22.34■■□□□ 1.17
CHMP4B-201ENST00000217402 IGHV1-8P0DP01 117 aa22.34■■□□□ 1.17
CHMP4B-201ENST00000217402 KIR2DS4P43632 304 aa22.34■■□□□ 1.17
CHMP4B-201ENST00000217402 KIR2DS1Q14954 304 aa22.34■■□□□ 1.17
CHMP4B-201ENST00000217402 OR52W1Q6IF63 320 aa22.34■■□□□ 1.17
CHMP4B-201ENST00000217402 HEPN1Q6WQI6 88 aa22.34■■□□□ 1.17
CHMP4B-201ENST00000217402 ZNF554Q86TJ5 538 aa22.34■■□□□ 1.17
CHMP4B-201ENST00000217402 HOGA1Q86XE5 327 aa22.34■■□□□ 1.17
CHMP4B-201ENST00000217402 BEST4Q8NFU0 473 aa22.34■■□□□ 1.17
CHMP4B-201ENST00000217402 METTL8Q9H825 291 aaKnown RBP22.34■■□□□ 1.17
CHMP4B-201ENST00000217402 IDI2-AS1Q9NZ38 188 aa22.34■■□□□ 1.17
CHMP4B-201ENST00000217402 KCNS2Q9ULS6 477 aa22.34■■□□□ 1.17
CHMP4B-201ENST00000217402 MAST4O15021 2626 aa22.34■■□□□ 1.17
CHMP4B-201ENST00000217402 FAM172BPA6NC97 362 aa22.33■■□□□ 1.17
CHMP4B-201ENST00000217402 NPIPB11E5RHQ5 1161 aa22.33■■□□□ 1.17
CHMP4B-201ENST00000217402 FABP7O15540 132 aa22.33■■□□□ 1.17
CHMP4B-201ENST00000217402 GSTT2P0CG29 244 aa22.33■■□□□ 1.17
CHMP4B-201ENST00000217402 GSTT2BP0CG30 244 aa22.33■■□□□ 1.17
CHMP4B-201ENST00000217402 MMP9P14780 707 aa22.33■■□□□ 1.17
CHMP4B-201ENST00000217402 NFYBP25208 207 aa22.33■■□□□ 1.17
CHMP4B-201ENST00000217402 PTBP1P26599 531 aaKnown RBP eCLIP22.33■■□□□ 1.171e-6■■■■□ 24.3
CHMP4B-201ENST00000217402 SNAPC3Q92966 411 aa22.33■■□□□ 1.17
CHMP4B-201ENST00000217402 LINC00574Q9H8X3 128 aa22.33■■□□□ 1.17
CHMP4B-201ENST00000217402 IGHV3-43A0A0B4J1X8 118 aa22.32■■□□□ 1.16
CHMP4B-201ENST00000217402 RBP4P02753 201 aa22.32■■□□□ 1.16
CHMP4B-201ENST00000217402 IGHV3-43DP0DP04 118 aa22.32■■□□□ 1.16
CHMP4B-201ENST00000217402 FOSL1P15407 271 aa22.32■■□□□ 1.16
CHMP4B-201ENST00000217402 ZNF45Q02386 682 aa22.32■■□□□ 1.16
CHMP4B-201ENST00000217402 SRSF7Q16629 238 aaKnown RBP eCLIP22.32■■□□□ 1.16
CHMP4B-201ENST00000217402 GALMQ96C23 342 aa22.32■■□□□ 1.16
CHMP4B-201ENST00000217402 TBX15Q96SF7 602 aa22.32■■□□□ 1.16
CHMP4B-201ENST00000217402 SRRQ9GZT4 340 aa22.32■■□□□ 1.16
CHMP4B-201ENST00000217402 RAB9BQ9NP90 201 aa22.32■■□□□ 1.16
CHMP4B-201ENST00000217402 YAE1D1Q9NRH1 226 aa22.32■■□□□ 1.16
CHMP4B-201ENST00000217402 HIVEP1P15822 2718 aa22.32■■□□□ 1.16
CHMP4B-201ENST00000217402 J3QLI3 93 aa22.31■■□□□ 1.16
CHMP4B-201ENST00000217402 SDCBPO00560 298 aaPredicted RBP22.31■■□□□ 1.16
CHMP4B-201ENST00000217402 FAM53AQ6NSI3 398 aaPredicted RBP22.31■■□□□ 1.16
CHMP4B-201ENST00000217402 Q6ZS49 121 aa22.31■■□□□ 1.16
CHMP4B-201ENST00000217402 C1orf122Q6ZSJ8 110 aa22.31■■□□□ 1.16
CHMP4B-201ENST00000217402 Q8N402 240 aa22.31■■□□□ 1.16
CHMP4B-201ENST00000217402 SUCNR1Q9BXA5 334 aa22.31■■□□□ 1.16
CHMP4B-201ENST00000217402 ANXA10Q9UJ72 324 aa22.31■■□□□ 1.16
CHMP4B-201ENST00000217402 ANAPC10Q9UM13 185 aa22.31■■□□□ 1.16
CHMP4B-201ENST00000217402 SESN1Q9Y6P5 492 aa22.31■■□□□ 1.16
CHMP4B-201ENST00000217402 RBBP9O75884 186 aa22.31■■□□□ 1.16
CHMP4B-201ENST00000217402 LY6G6DO95868 133 aa22.31■■□□□ 1.16
CHMP4B-201ENST00000217402 AVPP01185 164 aa22.31■■□□□ 1.16
CHMP4B-201ENST00000217402 FPR2P25090 351 aa22.31■■□□□ 1.16
CHMP4B-201ENST00000217402 IGSF11Q5DX21 431 aa22.31■■□□□ 1.16
CHMP4B-201ENST00000217402 UTF1Q5T230 341 aa22.31■■□□□ 1.16
CHMP4B-201ENST00000217402 PDZD9Q8IXQ8 264 aa22.31■■□□□ 1.16
CHMP4B-201ENST00000217402 OR4A4PQ8NGN8 299 aa22.31■■□□□ 1.16
CHMP4B-201ENST00000217402 S100ZQ8WXG8 99 aa22.31■■□□□ 1.16
CHMP4B-201ENST00000217402 MTFP1Q9UDX5 166 aa22.31■■□□□ 1.16
CHMP4B-201ENST00000217402 TLN2Q9Y4G6 2542 aa22.3■■□□□ 1.16
CHMP4B-201ENST00000217402 IGKV1-6A0A0C4DH72 117 aa22.3■■□□□ 1.16
CHMP4B-201ENST00000217402 F2RL2O00254 374 aa22.3■■□□□ 1.16
CHMP4B-201ENST00000217402 GSTZ1O43708 216 aaPredicted RBP22.3■■□□□ 1.16
CHMP4B-201ENST00000217402 PRTN3P24158 256 aa22.3■■□□□ 1.16
CHMP4B-201ENST00000217402 COX7A1P24310 79 aa22.3■■□□□ 1.16
CHMP4B-201ENST00000217402 RCVRNP35243 200 aa22.3■■□□□ 1.16
CHMP4B-201ENST00000217402 ARPC4P59998 168 aa22.3■■□□□ 1.16
CHMP4B-201ENST00000217402 ACTBP60709 375 aa22.3■■□□□ 1.16
CHMP4B-201ENST00000217402 ACTG1P63261 375 aa22.3■■□□□ 1.16
CHMP4B-201ENST00000217402 KLRD1Q13241 179 aa22.3■■□□□ 1.16
CHMP4B-201ENST00000217402 HERPUD1Q15011 391 aa22.3■■□□□ 1.16
CHMP4B-201ENST00000217402 OR52L2PQ8NGH6 319 aa22.3■■□□□ 1.16
CHMP4B-201ENST00000217402 OR10V1Q8NGI7 309 aa22.3■■□□□ 1.16
CHMP4B-201ENST00000217402 OR2S2Q9NQN1 319 aa22.3■■□□□ 1.16
CHMP4B-201ENST00000217402 BET1O15155 118 aa22.29■■□□□ 1.16
CHMP4B-201ENST00000217402 IGHV3-7P01780 117 aa22.29■■□□□ 1.16
CHMP4B-201ENST00000217402 HLA-DMAP28067 261 aa22.29■■□□□ 1.16
CHMP4B-201ENST00000217402 GNMTQ14749 295 aa22.29■■□□□ 1.16
CHMP4B-201ENST00000217402 LEAP2Q969E1 77 aa22.29■■□□□ 1.16
CHMP4B-201ENST00000217402 GNG12Q9UBI6 72 aa22.29■■□□□ 1.16
CHMP4B-201ENST00000217402 SLC23A1Q9UHI7 598 aa22.29■■□□□ 1.16
CHMP4B-201ENST00000217402 LANCL1O43813 399 aa22.28■■□□□ 1.16
CHMP4B-201ENST00000217402 CHRFAM7AQ494W8 412 aa22.28■■□□□ 1.16
CHMP4B-201ENST00000217402 LHX4Q969G2 390 aa22.28■■□□□ 1.16
CHMP4B-201ENST00000217402 THAP7Q9BT49 309 aaPredicted RBP22.28■■□□□ 1.16
CHMP4B-201ENST00000217402 TMEM133Q9H2Q1 129 aa22.28■■□□□ 1.16
CHMP4B-201ENST00000217402 OR1A1Q9P1Q5 309 aa22.28■■□□□ 1.16
CHMP4B-201ENST00000217402 HOXB4P17483 251 aaPredicted RBP22.28■■□□□ 1.16
CHMP4B-201ENST00000217402 NAT1P18440 290 aa22.28■■□□□ 1.16
CHMP4B-201ENST00000217402 LOXL3P58215 753 aa22.28■■□□□ 1.16
CHMP4B-201ENST00000217402 CLEC9AQ6UXN8 241 aa22.28■■□□□ 1.16
CHMP4B-201ENST00000217402 C1orf229Q6ZS94 237 aaPredicted RBP22.28■■□□□ 1.16
CHMP4B-201ENST00000217402 OR10A7Q8NGE5 316 aa22.28■■□□□ 1.16
CHMP4B-201ENST00000217402 TNFRSF14Q92956 283 aa22.28■■□□□ 1.16
CHMP4B-201ENST00000217402 SDHCQ99643 169 aaPredicted RBP22.28■■□□□ 1.16
CHMP4B-201ENST00000217402 UNKLQ9H9P5 680 aaKnown RBP22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms