RNA–Protein interactions for RNA: ENST00000035307.6

CHPF2-201, Transcript of chondroitin polymerizing factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF2, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-201ENST00000035307 SF3B5Q9BWJ5 86 aaKnown RBP10.38□□□□□ -0.75
CHPF2-201ENST00000035307 KPTNQ9Y664 436 aa10.38□□□□□ -0.75
CHPF2-201ENST00000035307 hCG_1809904A0A1W2PP81 198 aa10.37□□□□□ -0.75
CHPF2-201ENST00000035307 A0A1W2PR64 198 aa10.37□□□□□ -0.75
CHPF2-201ENST00000035307 A0A1W2PRV1 198 aa10.37□□□□□ -0.75
CHPF2-201ENST00000035307 ACTL6AO96019 429 aa10.37□□□□□ -0.75
CHPF2-201ENST00000035307 CTXN2P0C2S0 81 aa10.37□□□□□ -0.75
CHPF2-201ENST00000035307 KITLGP21583 273 aa10.37□□□□□ -0.75
CHPF2-201ENST00000035307 FOXO1Q12778 655 aa10.37□□□□□ -0.75
CHPF2-201ENST00000035307 ATRAIDQ6UW56 229 aa10.37□□□□□ -0.75
CHPF2-201ENST00000035307 LIAT1Q6ZQX7 453 aa10.37□□□□□ -0.75
CHPF2-201ENST00000035307 C9orf106Q8NAJ2 232 aa10.37□□□□□ -0.75
CHPF2-201ENST00000035307 LRRC29Q8WV35 223 aa10.37□□□□□ -0.75
CHPF2-201ENST00000035307 OIT3Q8WWZ8 545 aa10.37□□□□□ -0.75
CHPF2-201ENST00000035307 WNT5BQ9H1J7 359 aa10.37□□□□□ -0.75
CHPF2-201ENST00000035307 IGKV1D-8A0A087WSZ0 117 aa10.37□□□□□ -0.75
CHPF2-201ENST00000035307 RNF212BA8MTL3 300 aa10.37□□□□□ -0.75
CHPF2-201ENST00000035307 TFF1P04155 84 aa10.37□□□□□ -0.75
CHPF2-201ENST00000035307 ZNF17P17021 662 aa10.37□□□□□ -0.75
CHPF2-201ENST00000035307 MDKP21741 143 aaPredicted RBP10.37□□□□□ -0.75
CHPF2-201ENST00000035307 NTF4P34130 210 aa10.37□□□□□ -0.75
CHPF2-201ENST00000035307 PEAR1Q5VY43 1037 aaPredicted RBP10.37□□□□□ -0.75
CHPF2-201ENST00000035307 GGNQ86UU5 652 aa10.37□□□□□ -0.75
CHPF2-201ENST00000035307 PAQR4Q8N4S7 273 aaPredicted RBP10.37□□□□□ -0.75
CHPF2-201ENST00000035307 CYYR1Q96J86 154 aa10.37□□□□□ -0.75
CHPF2-201ENST00000035307 MED9Q9NWA0 146 aa10.37□□□□□ -0.75
CHPF2-201ENST00000035307 LRP5LA4QPB2 252 aa10.37□□□□□ -0.75
CHPF2-201ENST00000035307 PSG2P11465 335 aa10.37□□□□□ -0.75
CHPF2-201ENST00000035307 CTRB1P17538 263 aa10.37□□□□□ -0.75
CHPF2-201ENST00000035307 CLDN18P56856 261 aa10.37□□□□□ -0.75
CHPF2-201ENST00000035307 SNRPEP62304 92 aaKnown RBP10.37□□□□□ -0.75
CHPF2-201ENST00000035307 CTRB2Q6GPI1 263 aa10.37□□□□□ -0.75
CHPF2-201ENST00000035307 OR52M1Q8NGK5 317 aa10.37□□□□□ -0.75
CHPF2-201ENST00000035307 PRELID3BQ9Y3B1 194 aa10.37□□□□□ -0.75
CHPF2-201ENST00000035307 DFFBO76075 338 aa10.36□□□□□ -0.75
CHPF2-201ENST00000035307 IFI6P09912 130 aa10.36□□□□□ -0.75
CHPF2-201ENST00000035307 MPGP29372 298 aa10.36□□□□□ -0.75
CHPF2-201ENST00000035307 RBM11P57052 281 aaKnown RBP10.36□□□□□ -0.75
CHPF2-201ENST00000035307 RAB31Q13636 194 aa10.36□□□□□ -0.75
CHPF2-201ENST00000035307 SSX2Q16385 188 aa10.36□□□□□ -0.75
CHPF2-201ENST00000035307 RGS7BPQ6MZT1 257 aaPredicted RBP10.36□□□□□ -0.75
CHPF2-201ENST00000035307 TAAR3PQ9P1P4 343 aa10.36□□□□□ -0.75
CHPF2-201ENST00000035307 RCC2Q9P258 522 aaKnown RBP10.36□□□□□ -0.75
CHPF2-201ENST00000035307 OR5H1A6NKK0 313 aa10.36□□□□□ -0.75
CHPF2-201ENST00000035307 CSRP1P21291 193 aaKnown RBP10.36□□□□□ -0.75
CHPF2-201ENST00000035307 CD82P27701 267 aa10.36□□□□□ -0.75
CHPF2-201ENST00000035307 MPV17LQ2QL34 196 aa10.36□□□□□ -0.75
CHPF2-201ENST00000035307 FDX2Q6P4F2 183 aa10.36□□□□□ -0.75
CHPF2-201ENST00000035307 CPEB3Q8NE35 698 aaKnown RBP10.36□□□□□ -0.75
CHPF2-201ENST00000035307 SHARPINQ9H0F6 387 aa10.36□□□□□ -0.75
CHPF2-201ENST00000035307 A0A1W2PNV4 684 aa10.36□□□□□ -0.75
CHPF2-201ENST00000035307 CCL21O00585 134 aa10.36□□□□□ -0.75
CHPF2-201ENST00000035307 OR2A4O95047 310 aa10.36□□□□□ -0.75
CHPF2-201ENST00000035307 PPP1CCP36873 323 aaKnown RBP10.36□□□□□ -0.75
CHPF2-201ENST00000035307 FAM3AP98173 230 aa10.36□□□□□ -0.75
CHPF2-201ENST00000035307 HOXA4Q00056 320 aaPredicted RBP10.36□□□□□ -0.75
CHPF2-201ENST00000035307 OR10P1Q8NGE3 313 aa10.36□□□□□ -0.75
CHPF2-201ENST00000035307 NANPQ8TBE9 248 aa10.36□□□□□ -0.75
CHPF2-201ENST00000035307 OR2A7Q96R45 310 aa10.36□□□□□ -0.75
CHPF2-201ENST00000035307 ALX4Q9H161 411 aaPredicted RBP10.36□□□□□ -0.75
CHPF2-201ENST00000035307 TLNRD1Q9H1K6 362 aa10.36□□□□□ -0.75
CHPF2-201ENST00000035307 DECR2Q9NUI1 292 aa10.36□□□□□ -0.75
CHPF2-201ENST00000035307 LPAR3Q9UBY5 353 aa10.36□□□□□ -0.75
CHPF2-201ENST00000035307 TMED3Q9Y3Q3 217 aa10.36□□□□□ -0.75
CHPF2-201ENST00000035307 PKD1L2Q7Z442 2459 aa10.36□□□□□ -0.75
CHPF2-201ENST00000035307 HBE1P02100 147 aa10.35□□□□□ -0.75
CHPF2-201ENST00000035307 MUC1P15941 1255 aaPredicted RBP10.35□□□□□ -0.75
CHPF2-201ENST00000035307 PUSL1Q8N0Z8 303 aaKnown RBP10.35□□□□□ -0.75
CHPF2-201ENST00000035307 LYG1Q8N1E2 194 aa10.35□□□□□ -0.75
CHPF2-201ENST00000035307 CA5BP1Q8WTZ4 195 aa10.35□□□□□ -0.75
CHPF2-201ENST00000035307 C12orf57Q99622 126 aa10.35□□□□□ -0.75
CHPF2-201ENST00000035307 MRPL13Q9BYD1 178 aaKnown RBP10.35□□□□□ -0.75
CHPF2-201ENST00000035307 RIMS4Q9H426 269 aaPredicted RBP10.35□□□□□ -0.75
CHPF2-201ENST00000035307 ASCL3Q9NQ33 180 aa10.35□□□□□ -0.75
CHPF2-201ENST00000035307 FRYQ5TBA9 3013 aa10.35□□□□□ -0.75
CHPF2-201ENST00000035307 A0A0U1RQV5 110 aa10.35□□□□□ -0.75
CHPF2-201ENST00000035307 A0A1W2PPE2 198 aa10.35□□□□□ -0.75
CHPF2-201ENST00000035307 A0A1W2PPH5 198 aa10.35□□□□□ -0.75
CHPF2-201ENST00000035307 A0A1W2PPQ1 181 aa10.35□□□□□ -0.75
CHPF2-201ENST00000035307 APELAP0DMC3 54 aa10.35□□□□□ -0.75
CHPF2-201ENST00000035307 CCL8P80075 99 aa10.35□□□□□ -0.75
CHPF2-201ENST00000035307 NHLRC3Q5JS37 347 aa10.35□□□□□ -0.75
CHPF2-201ENST00000035307 HSD17B13Q7Z5P4 300 aaPredicted RBP10.35□□□□□ -0.75
CHPF2-201ENST00000035307 CCL17Q92583 94 aa10.35□□□□□ -0.75
CHPF2-201ENST00000035307 SMIM7Q9BQ49 75 aa10.35□□□□□ -0.75
CHPF2-201ENST00000035307 MMP26Q9NRE1 261 aa10.35□□□□□ -0.75
CHPF2-201ENST00000035307 ZNF705FA8MVS1 300 aaPredicted RBP10.35□□□□□ -0.75
CHPF2-201ENST00000035307 LINC01387J3KSC0 135 aa10.35□□□□□ -0.75
CHPF2-201ENST00000035307 MFNGO00587 321 aa10.35□□□□□ -0.75
CHPF2-201ENST00000035307 CYB5BO43169 146 aa10.35□□□□□ -0.75
CHPF2-201ENST00000035307 CYTIPO60759 359 aa10.35□□□□□ -0.75
CHPF2-201ENST00000035307 OR8U8P0C7N1 319 aa10.35□□□□□ -0.75
CHPF2-201ENST00000035307 ZNF705DP0CH99 300 aaPredicted RBP10.35□□□□□ -0.75
CHPF2-201ENST00000035307 ZNF705BP0CI00 300 aaPredicted RBP10.35□□□□□ -0.75
CHPF2-201ENST00000035307 TAS2R30P59541 319 aa10.35□□□□□ -0.75
CHPF2-201ENST00000035307 BATFQ16520 125 aa10.35□□□□□ -0.75
CHPF2-201ENST00000035307 NMES1Q9C002 83 aa10.35□□□□□ -0.75
CHPF2-201ENST00000035307 SH3BGRL3Q9H299 93 aa10.35□□□□□ -0.75
CHPF2-201ENST00000035307 LIN7CQ9NUP9 197 aaKnown RBP10.35□□□□□ -0.75
CHPF2-201ENST00000035307 WSB1Q9Y6I7 421 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms