RNA–Protein interactions for RNA: ENST00000641513.1

PHGDH-219, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-219ENST00000641513 TMEM230Q96A57 120 aa7.49□□□□□ -1.21
PHGDH-219ENST00000641513 OR2V2Q96R30 315 aa7.49□□□□□ -1.21
PHGDH-219ENST00000641513 SHARPINQ9H0F6 387 aa7.49□□□□□ -1.21
PHGDH-219ENST00000641513 C5orf66Q9H5L9 145 aa7.49□□□□□ -1.21
PHGDH-219ENST00000641513 NARFLQ9H6Q4 476 aa7.49□□□□□ -1.21
PHGDH-219ENST00000641513 ZNF286AQ9HBT8 521 aa7.49□□□□□ -1.21
PHGDH-219ENST00000641513 BARX1Q9HBU1 254 aaPredicted RBP7.49□□□□□ -1.21
PHGDH-219ENST00000641513 EHFQ9NZC4 300 aa7.49□□□□□ -1.21
PHGDH-219ENST00000641513 IGLV3-9A0A075B6K5 115 aa7.48□□□□□ -1.21
PHGDH-219ENST00000641513 WNT9BO14905 357 aa7.48□□□□□ -1.21
PHGDH-219ENST00000641513 FLNBO75369 2602 aaKnown RBP7.48□□□□□ -1.21
PHGDH-219ENST00000641513 FCGR3AP08637 254 aa7.48□□□□□ -1.21
PHGDH-219ENST00000641513 TPT1P13693 172 aaKnown RBP7.48□□□□□ -1.21
PHGDH-219ENST00000641513 VAMP1P23763 118 aa7.48□□□□□ -1.21
PHGDH-219ENST00000641513 CD200P41217 278 aa7.48□□□□□ -1.21
PHGDH-219ENST00000641513 SUPT4H1P63272 117 aaKnown RBP7.48□□□□□ -1.21
PHGDH-219ENST00000641513 TNFAIP6P98066 277 aaPredicted RBP7.48□□□□□ -1.21
PHGDH-219ENST00000641513 TLE1Q04724 770 aa7.48□□□□□ -1.21
PHGDH-219ENST00000641513 IL15RAQ13261 267 aa7.48□□□□□ -1.21
PHGDH-219ENST00000641513 RBM39Q14498 530 aaKnown RBP7.48□□□□□ -1.21
PHGDH-219ENST00000641513 CDSNQ15517 529 aa7.48□□□□□ -1.21
PHGDH-219ENST00000641513 C4orf17Q53FE4 359 aa7.48□□□□□ -1.21
PHGDH-219ENST00000641513 WDR82Q6UXN9 313 aa7.48□□□□□ -1.21
PHGDH-219ENST00000641513 C17orf107Q6ZR85 190 aa7.48□□□□□ -1.21
PHGDH-219ENST00000641513 MOGAT3Q86VF5 341 aa7.48□□□□□ -1.21
PHGDH-219ENST00000641513 C11orf53Q8IXP5 236 aa7.48□□□□□ -1.21
PHGDH-219ENST00000641513 LRTM2Q8N967 370 aa7.48□□□□□ -1.21
PHGDH-219ENST00000641513 ADAD2Q8NCV1 583 aaKnown RBP7.48□□□□□ -1.21
PHGDH-219ENST00000641513 GALNT11Q8NCW6 608 aa7.48□□□□□ -1.21
PHGDH-219ENST00000641513 PIK3IP1Q96FE7 263 aa7.48□□□□□ -1.21
PHGDH-219ENST00000641513 MEGF10Q96KG7 1140 aa7.48□□□□□ -1.21
PHGDH-219ENST00000641513 C2orf50Q96LR7 162 aa7.48□□□□□ -1.21
PHGDH-219ENST00000641513 NRIP2Q9BQI9 281 aa7.48□□□□□ -1.21
PHGDH-219ENST00000641513 RTBDNQ9BSG5 229 aaPredicted RBP7.48□□□□□ -1.21
PHGDH-219ENST00000641513 C12orf4Q9NQ89 552 aa7.48□□□□□ -1.21
PHGDH-219ENST00000641513 ZFP57Q9NU63 452 aa7.48□□□□□ -1.21
PHGDH-219ENST00000641513 MBD2Q9UBB5 411 aa7.48□□□□□ -1.21
PHGDH-219ENST00000641513 C14orf166Q9Y224 244 aaKnown RBP7.48□□□□□ -1.21
PHGDH-219ENST00000641513 IGKV1D-8A0A087WSZ0 117 aa7.47□□□□□ -1.21
PHGDH-219ENST00000641513 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.47□□□□□ -1.21
PHGDH-219ENST00000641513 POM121CA8CG34 1229 aa7.47□□□□□ -1.21
PHGDH-219ENST00000641513 ZG16O60844 167 aa7.47□□□□□ -1.21
PHGDH-219ENST00000641513 SPDEFO95238 335 aa7.47□□□□□ -1.21
PHGDH-219ENST00000641513 OR2H2O95918 312 aa7.47□□□□□ -1.21
PHGDH-219ENST00000641513 HAND1O96004 215 aa7.47□□□□□ -1.21
PHGDH-219ENST00000641513 IGHV1-46P01743 117 aa7.47□□□□□ -1.21
PHGDH-219ENST00000641513 GAPDHP04406 335 aaKnown RBP7.47□□□□□ -1.21
PHGDH-219ENST00000641513 AKR1C4P17516 323 aa7.47□□□□□ -1.21
PHGDH-219ENST00000641513 SERPINF1P36955 418 aa7.47□□□□□ -1.21
PHGDH-219ENST00000641513 CEBPDP49716 269 aaPredicted RBP7.47□□□□□ -1.21
PHGDH-219ENST00000641513 UCP3P55916 312 aa7.47□□□□□ -1.21
PHGDH-219ENST00000641513 ERVK11-1P61568 191 aa7.47□□□□□ -1.21
PHGDH-219ENST00000641513 ADIPOQQ15848 244 aa7.47□□□□□ -1.21
PHGDH-219ENST00000641513 SMIM21Q3B7S5 101 aa7.47□□□□□ -1.21
PHGDH-219ENST00000641513 SPIN3Q5JUX0 258 aa7.47□□□□□ -1.21
PHGDH-219ENST00000641513 EIF5AL1Q6IS14 154 aaKnown RBP7.47□□□□□ -1.21
PHGDH-219ENST00000641513 CLEC18BQ6UXF7 455 aa7.47□□□□□ -1.21
PHGDH-219ENST00000641513 ACP7Q6ZNF0 438 aa7.47□□□□□ -1.21
PHGDH-219ENST00000641513 LHFPL5Q8TAF8 219 aa7.47□□□□□ -1.21
PHGDH-219ENST00000641513 NEUROG1Q92886 237 aa7.47□□□□□ -1.21
PHGDH-219ENST00000641513 GALNT14Q96FL9 552 aa7.47□□□□□ -1.21
PHGDH-219ENST00000641513 CXorf58Q96LI9 332 aa7.47□□□□□ -1.21
PHGDH-219ENST00000641513 TLNRD1Q9H1K6 362 aa7.47□□□□□ -1.21
PHGDH-219ENST00000641513 WDR13Q9H1Z4 485 aa7.47□□□□□ -1.21
PHGDH-219ENST00000641513 DYNLRB1Q9NP97 96 aa7.47□□□□□ -1.21
PHGDH-219ENST00000641513 NECAP2Q9NVZ3 263 aa7.47□□□□□ -1.21
PHGDH-219ENST00000641513 ANXA10Q9UJ72 324 aa7.47□□□□□ -1.21
PHGDH-219ENST00000641513 ZDHHC8Q9ULC8 765 aa7.47□□□□□ -1.21
PHGDH-219ENST00000641513 RNF115Q9Y4L5 304 aa7.47□□□□□ -1.21
PHGDH-219ENST00000641513 PLCE1Q9P212 2302 aa7.47□□□□□ -1.21
PHGDH-219ENST00000641513 DSCAMO60469 2012 aa7.47□□□□□ -1.21
PHGDH-219ENST00000641513 IGHV3OR15-7A0A075B7D8 119 aa7.46□□□□□ -1.22
PHGDH-219ENST00000641513 TRAV24A0A0B4J272 114 aa7.46□□□□□ -1.22
PHGDH-219ENST00000641513 PIGBOS1A0A0B4J2F0 54 aa7.46□□□□□ -1.22
PHGDH-219ENST00000641513 C5orf51A6NDU8 294 aa7.46□□□□□ -1.22
PHGDH-219ENST00000641513 CRYM-AS1A6NIL9 109 aa7.46□□□□□ -1.22
PHGDH-219ENST00000641513 SHISA9B4DS77 424 aa7.46□□□□□ -1.22
PHGDH-219ENST00000641513 E7EQL1 145 aa7.46□□□□□ -1.22
PHGDH-219ENST00000641513 CLDN14O95500 239 aa7.46□□□□□ -1.22
PHGDH-219ENST00000641513 IFNA2P01563 188 aa7.46□□□□□ -1.22
PHGDH-219ENST00000641513 ACAA1P09110 424 aaPredicted RBP7.46□□□□□ -1.22
PHGDH-219ENST00000641513 IRF2P14316 349 aa7.46□□□□□ -1.22
PHGDH-219ENST00000641513 PGAM2P15259 253 aa7.46□□□□□ -1.22
PHGDH-219ENST00000641513 RBMXP38159 391 aaKnown RBP7.46□□□□□ -1.22
PHGDH-219ENST00000641513 GLP1RP43220 463 aa7.46□□□□□ -1.22
PHGDH-219ENST00000641513 NPY4RP50391 375 aa7.46□□□□□ -1.22
PHGDH-219ENST00000641513 LUMP51884 338 aaPredicted RBP7.46□□□□□ -1.22
PHGDH-219ENST00000641513 HOXA4Q00056 320 aaPredicted RBP7.46□□□□□ -1.22
PHGDH-219ENST00000641513 SPRNQ5BIV9 151 aa7.46□□□□□ -1.22
PHGDH-219ENST00000641513 BEX5Q5H9J7 111 aa7.46□□□□□ -1.22
PHGDH-219ENST00000641513 Q6P435 159 aa7.46□□□□□ -1.22
PHGDH-219ENST00000641513 DHRS11Q6UWP2 260 aa7.46□□□□□ -1.22
PHGDH-219ENST00000641513 BAP18Q8IXM2 172 aa7.46□□□□□ -1.22
PHGDH-219ENST00000641513 OR5T2Q8NGG2 359 aa7.46□□□□□ -1.22
PHGDH-219ENST00000641513 OR11L1Q8NGX0 322 aa7.46□□□□□ -1.22
PHGDH-219ENST00000641513 OR10Z1Q8NGY1 313 aa7.46□□□□□ -1.22
PHGDH-219ENST00000641513 SAT2Q96F10 170 aaPredicted RBP7.46□□□□□ -1.22
PHGDH-219ENST00000641513 LINC00052Q96N35 136 aa7.46□□□□□ -1.22
PHGDH-219ENST00000641513 RNF126Q9BV68 326 aa7.46□□□□□ -1.22
PHGDH-219ENST00000641513 ZNF471Q9BX82 626 aaPredicted RBP7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms