RNA–Protein interactions for RNA: ENST00000641272.1

PHGDH-213, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-213ENST00000641272 GPR148Q8TDV2 347 aa13.17□□□□□ -0.3
PHGDH-213ENST00000641272 TMEM106AQ96A25 262 aa13.17□□□□□ -0.3
PHGDH-213ENST00000641272 Q96MT0 163 aa13.17□□□□□ -0.3
PHGDH-213ENST00000641272 MYCBPQ99417 103 aaPredicted RBP13.17□□□□□ -0.3
PHGDH-213ENST00000641272 LINC00574Q9H8X3 128 aa13.17□□□□□ -0.3
PHGDH-213ENST00000641272 MAGEA13PA6NCF6 341 aa13.16□□□□□ -0.3
PHGDH-213ENST00000641272 SDCBPO00560 298 aaPredicted RBP13.16□□□□□ -0.3
PHGDH-213ENST00000641272 SLC31A2O15432 143 aa13.16□□□□□ -0.3
PHGDH-213ENST00000641272 MPZL2O60487 215 aa13.16□□□□□ -0.3
PHGDH-213ENST00000641272 CSTBP04080 98 aaKnown RBP13.16□□□□□ -0.3
PHGDH-213ENST00000641272 ZNF93P35789 620 aaPredicted RBP13.16□□□□□ -0.3
PHGDH-213ENST00000641272 KCNJ3P48549 501 aa13.16□□□□□ -0.3
PHGDH-213ENST00000641272 PPP3R1P63098 170 aa13.16□□□□□ -0.3
PHGDH-213ENST00000641272 ZNF816Q0VGE8 651 aaPredicted RBP13.16□□□□□ -0.3
PHGDH-213ENST00000641272 ZFP1Q6P2D0 407 aa13.16□□□□□ -0.3
PHGDH-213ENST00000641272 OR52N1Q8NH53 320 aa13.16□□□□□ -0.3
PHGDH-213ENST00000641272 ARL11Q969Q4 196 aa13.16□□□□□ -0.3
PHGDH-213ENST00000641272 EAF1Q96JC9 268 aaPredicted RBP13.16□□□□□ -0.3
PHGDH-213ENST00000641272 C9orf16Q9BUW7 83 aa13.16□□□□□ -0.3
PHGDH-213ENST00000641272 GPR61Q9BZJ8 451 aa13.16□□□□□ -0.3
PHGDH-213ENST00000641272 METTL9Q9H1A3 318 aa13.16□□□□□ -0.3
PHGDH-213ENST00000641272 NCOR1P1Q9H4R4 102 aa13.16□□□□□ -0.3
PHGDH-213ENST00000641272 RPL36Q9Y3U8 105 aaKnown RBP13.16□□□□□ -0.3
PHGDH-213ENST00000641272 SIRT4Q9Y6E7 314 aaPredicted RBP13.16□□□□□ -0.3
PHGDH-213ENST00000641272 LOC100130705A0A1B0GUX0 176 aa13.15□□□□□ -0.3
PHGDH-213ENST00000641272 C15orf65H3BRN8 121 aa13.15□□□□□ -0.3
PHGDH-213ENST00000641272 IGHG2P01859 326 aa13.15□□□□□ -0.3
PHGDH-213ENST00000641272 RPLP1P05386 114 aaKnown RBP13.15□□□□□ -0.3
PHGDH-213ENST00000641272 GPR12P47775 334 aa13.15□□□□□ -0.3
PHGDH-213ENST00000641272 ETV1P50549 477 aa13.15□□□□□ -0.3
PHGDH-213ENST00000641272 LUMP51884 338 aaPredicted RBP13.15□□□□□ -0.3
PHGDH-213ENST00000641272 PAX5Q02548 391 aa13.15□□□□□ -0.3
PHGDH-213ENST00000641272 ZNF695Q8IW36 515 aa13.15□□□□□ -0.3
PHGDH-213ENST00000641272 IZUMO1Q8IYV9 350 aa13.15□□□□□ -0.3
PHGDH-213ENST00000641272 TFAP2CQ92754 450 aa13.15□□□□□ -0.3
PHGDH-213ENST00000641272 RAX2Q96IS3 184 aa13.15□□□□□ -0.3
PHGDH-213ENST00000641272 CYYR1Q96J86 154 aa13.15□□□□□ -0.3
PHGDH-213ENST00000641272 P2RX4Q99571 388 aa13.15□□□□□ -0.3
PHGDH-213ENST00000641272 S100A13Q99584 98 aa13.15□□□□□ -0.3
PHGDH-213ENST00000641272 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.15□□□□□ -0.3
PHGDH-213ENST00000641272 ZNF736B4DX44 427 aaPredicted RBP13.14□□□□□ -0.31
PHGDH-213ENST00000641272 AIPO00170 330 aa13.14□□□□□ -0.31
PHGDH-213ENST00000641272 LALBAP00709 142 aa13.14□□□□□ -0.31
PHGDH-213ENST00000641272 GAPDHP04406 335 aaKnown RBP13.14□□□□□ -0.31
PHGDH-213ENST00000641272 VSIG8P0DPA2 414 aa13.14□□□□□ -0.31
PHGDH-213ENST00000641272 BDKRB2P30411 391 aa13.14□□□□□ -0.31
PHGDH-213ENST00000641272 MYCNOSP40205 109 aa13.14□□□□□ -0.31
PHGDH-213ENST00000641272 SLC22A6Q4U2R8 563 aa13.14□□□□□ -0.31
PHGDH-213ENST00000641272 ASCL4Q6XD76 172 aa13.14□□□□□ -0.31
PHGDH-213ENST00000641272 PRR18Q8N4B5 295 aa13.14□□□□□ -0.31
PHGDH-213ENST00000641272 ZFP41Q8N8Y5 198 aa13.14□□□□□ -0.31
PHGDH-213ENST00000641272 Q8NFD4 153 aa13.14□□□□□ -0.31
PHGDH-213ENST00000641272 OR10A7Q8NGE5 316 aa13.14□□□□□ -0.31
PHGDH-213ENST00000641272 OR10V1Q8NGI7 309 aa13.14□□□□□ -0.31
PHGDH-213ENST00000641272 ZNF184Q99676 751 aaPredicted RBP13.14□□□□□ -0.31
PHGDH-213ENST00000641272 B9D2Q9BPU9 175 aa13.14□□□□□ -0.31
PHGDH-213ENST00000641272 TMEM138Q9NPI0 162 aa13.14□□□□□ -0.31
PHGDH-213ENST00000641272 GFOD1Q9NXC2 390 aa13.14□□□□□ -0.31
PHGDH-213ENST00000641272 IL36GQ9NZH8 169 aa13.14□□□□□ -0.31
PHGDH-213ENST00000641272 NBEAL2Q6ZNJ1 2754 aa13.14□□□□□ -0.31
PHGDH-213ENST00000641272 H0YHG0 523 aa13.13□□□□□ -0.31
PHGDH-213ENST00000641272 AP4M1O00189 453 aa13.13□□□□□ -0.31
PHGDH-213ENST00000641272 WBP4O75554 376 aaKnown RBP13.13□□□□□ -0.31
PHGDH-213ENST00000641272 RIPK1Q13546 671 aa13.13□□□□□ -0.31
PHGDH-213ENST00000641272 KLHL22Q53GT1 634 aa13.13□□□□□ -0.31
PHGDH-213ENST00000641272 NHLRC3Q5JS37 347 aa13.13□□□□□ -0.31
PHGDH-213ENST00000641272 RPL22L1Q6P5R6 122 aaKnown RBP13.13□□□□□ -0.31
PHGDH-213ENST00000641272 Q8N6K4 173 aa13.13□□□□□ -0.31
PHGDH-213ENST00000641272 Q8N9W7 124 aa13.13□□□□□ -0.31
PHGDH-213ENST00000641272 RTN4IP1Q8WWV3 396 aaPredicted RBP13.13□□□□□ -0.31
PHGDH-213ENST00000641272 HSPB9Q9BQS6 159 aa13.13□□□□□ -0.31
PHGDH-213ENST00000641272 MCRIP2Q9BUT9 160 aaKnown RBP13.13□□□□□ -0.31
PHGDH-213ENST00000641272 ZFP57Q9NU63 452 aa13.13□□□□□ -0.31
PHGDH-213ENST00000641272 PNMA8CA0A1B0GUJ8 204 aa13.12□□□□□ -0.31
PHGDH-213ENST00000641272 CCL24O00175 119 aa13.12□□□□□ -0.31
PHGDH-213ENST00000641272 MYF6P23409 242 aa13.12□□□□□ -0.31
PHGDH-213ENST00000641272 IL3RAP26951 378 aa13.12□□□□□ -0.31
PHGDH-213ENST00000641272 EBI3Q14213 229 aa13.12□□□□□ -0.31
PHGDH-213ENST00000641272 MPV17LQ2QL34 196 aa13.12□□□□□ -0.31
PHGDH-213ENST00000641272 SLC16A12Q6ZSM3 486 aa13.12□□□□□ -0.31
PHGDH-213ENST00000641272 TGIF2LXQ8IUE1 241 aa13.12□□□□□ -0.31
PHGDH-213ENST00000641272 OR2T10Q8NGZ9 312 aa13.12□□□□□ -0.31
PHGDH-213ENST00000641272 OR4K15Q8NH41 348 aa13.12□□□□□ -0.31
PHGDH-213ENST00000641272 MUL1Q969V5 352 aa13.12□□□□□ -0.31
PHGDH-213ENST00000641272 SMIM19Q96E16 107 aa13.12□□□□□ -0.31
PHGDH-213ENST00000641272 PRR25Q96S07 402 aa13.12□□□□□ -0.31
PHGDH-213ENST00000641272 ABCG5Q9H222 651 aa13.12□□□□□ -0.31
PHGDH-213ENST00000641272 IFT22Q9H7X7 185 aa13.12□□□□□ -0.31
PHGDH-213ENST00000641272 FGF20Q9NP95 211 aaPredicted RBP13.12□□□□□ -0.31
PHGDH-213ENST00000641272 LIN7CQ9NUP9 197 aaKnown RBP13.12□□□□□ -0.31
PHGDH-213ENST00000641272 MRPS18AQ9NVS2 196 aaKnown RBP13.12□□□□□ -0.31
PHGDH-213ENST00000641272 TRAV8-7A0A075B6U6 113 aa13.11□□□□□ -0.31
PHGDH-213ENST00000641272 C12orf77C9JDV5 145 aa13.11□□□□□ -0.31
PHGDH-213ENST00000641272 DGCR2P98153 550 aa13.11□□□□□ -0.31
PHGDH-213ENST00000641272 GPR50Q13585 617 aa13.11□□□□□ -0.31
PHGDH-213ENST00000641272 CXorf66Q5JRM2 361 aaPredicted RBP13.11□□□□□ -0.31
PHGDH-213ENST00000641272 TEX38Q6PEX7 206 aa13.11□□□□□ -0.31
PHGDH-213ENST00000641272 TMPRSS11AQ6ZMR5 421 aa13.11□□□□□ -0.31
PHGDH-213ENST00000641272 ZNF497Q6ZNH5 498 aa13.11□□□□□ -0.31
PHGDH-213ENST00000641272 LINC00596Q86U02 117 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms