RNA–Protein interactions for RNA: ENST00000638680.1

SCARB2-213, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 5,817 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-213ENST00000638680 GLI3P10071 1580 aa16.17■□□□□ 0.18
SCARB2-213ENST00000638680 IGSF23A1L1A6 192 aa16.17■□□□□ 0.18
SCARB2-213ENST00000638680 HOXA6P31267 233 aa16.17■□□□□ 0.18
SCARB2-213ENST00000638680 RUNX1Q01196 453 aa16.17■□□□□ 0.18
SCARB2-213ENST00000638680 TMEM204Q9BSN7 226 aa16.17■□□□□ 0.18
SCARB2-213ENST00000638680 DEDDO75618 318 aa16.17■□□□□ 0.18
SCARB2-213ENST00000638680 COL18A1P39060 1754 aa16.17■□□□□ 0.18
SCARB2-213ENST00000638680 OR2T8A6NH00 312 aa16.17■□□□□ 0.18
SCARB2-213ENST00000638680 MS4A18H0YCH9 400 aa16.17■□□□□ 0.18
SCARB2-213ENST00000638680 MMP9P14780 707 aa16.17■□□□□ 0.18
SCARB2-213ENST00000638680 MS4A18Q3C1V0 323 aa16.17■□□□□ 0.18
SCARB2-213ENST00000638680 LYRM7Q5U5X0 104 aa16.17■□□□□ 0.18
SCARB2-213ENST00000638680 LRRC75AQ8NAA5 344 aa16.17■□□□□ 0.18
SCARB2-213ENST00000638680 TREM2Q9NZC2 230 aa16.17■□□□□ 0.18
SCARB2-213ENST00000638680 DLEC1Q9Y238 1755 aa16.17■□□□□ 0.18
SCARB2-213ENST00000638680 ZNF207O43670 478 aaKnown RBP16.17■□□□□ 0.18
SCARB2-213ENST00000638680 COL8A1P27658 744 aa16.17■□□□□ 0.18
SCARB2-213ENST00000638680 SUCLG1P53597 346 aaKnown RBP16.17■□□□□ 0.18
SCARB2-213ENST00000638680 OR4A4PQ8NGN8 299 aa16.17■□□□□ 0.18
SCARB2-213ENST00000638680 CLN8Q9UBY8 286 aa16.17■□□□□ 0.18
SCARB2-213ENST00000638680 ZNF552Q9H707 407 aaPredicted RBP16.16■□□□□ 0.18
SCARB2-213ENST00000638680 GPR35Q9HC97 309 aa16.16■□□□□ 0.18
SCARB2-213ENST00000638680 TINAGQ9UJW2 476 aa16.16■□□□□ 0.18
SCARB2-213ENST00000638680 CFDP00746 253 aaPredicted RBP16.16■□□□□ 0.18
SCARB2-213ENST00000638680 C9orf40Q8IXQ3 194 aa16.16■□□□□ 0.18
SCARB2-213ENST00000638680 VSTM2AQ8TAG5 236 aa16.16■□□□□ 0.18
SCARB2-213ENST00000638680 CLEC1BQ9P126 229 aa16.16■□□□□ 0.18
SCARB2-213ENST00000638680 AMMECR1Q9Y4X0 333 aaPredicted RBP16.16■□□□□ 0.18
SCARB2-213ENST00000638680 SIPA1L3O60292 1781 aaPredicted RBP16.16■□□□□ 0.18
SCARB2-213ENST00000638680 BCL2P10415 239 aa16.16■□□□□ 0.18
SCARB2-213ENST00000638680 RIGQ13278 110 aa16.16■□□□□ 0.18
SCARB2-213ENST00000638680 EIF4E3Q8N5X7 224 aaKnown RBP16.16■□□□□ 0.18
SCARB2-213ENST00000638680 WNT2BQ93097 391 aa16.16■□□□□ 0.18
SCARB2-213ENST00000638680 ADIPOR1Q96A54 375 aa16.16■□□□□ 0.18
SCARB2-213ENST00000638680 NUP214P35658 2090 aaPredicted RBP16.16■□□□□ 0.18
SCARB2-213ENST00000638680 PPIHO43447 177 aaKnown RBP16.16■□□□□ 0.18
SCARB2-213ENST00000638680 SMPD2O60906 423 aa16.16■□□□□ 0.18
SCARB2-213ENST00000638680 ACP1P24666 158 aa16.16■□□□□ 0.18
SCARB2-213ENST00000638680 EIF3IQ13347 325 aaKnown RBP16.16■□□□□ 0.18
SCARB2-213ENST00000638680 C10orf113Q5VZT2 155 aa16.16■□□□□ 0.18
SCARB2-213ENST00000638680 ZNF519Q8TB69 540 aa16.16■□□□□ 0.18
SCARB2-213ENST00000638680 FOCADQ5VW36 1801 aa16.16■□□□□ 0.18
SCARB2-213ENST00000638680 TCF21O43680 179 aa16.16■□□□□ 0.18
SCARB2-213ENST00000638680 CD99P14209 185 aa16.16■□□□□ 0.18
SCARB2-213ENST00000638680 EPHA8P29322 1005 aaPredicted RBP16.16■□□□□ 0.18
SCARB2-213ENST00000638680 PET117Q6UWS5 81 aa16.16■□□□□ 0.18
SCARB2-213ENST00000638680 TMEM38BQ9NVV0 291 aa16.16■□□□□ 0.18
SCARB2-213ENST00000638680 DIRC3C9JPN6 131 aa16.15■□□□□ 0.18
SCARB2-213ENST00000638680 FCGR3AP08637 254 aa16.15■□□□□ 0.18
SCARB2-213ENST00000638680 PSMB2P49721 201 aa16.15■□□□□ 0.18
SCARB2-213ENST00000638680 SLC35E4Q6ICL7 350 aa16.15■□□□□ 0.18
SCARB2-213ENST00000638680 DHRS13Q6UX07 377 aa16.15■□□□□ 0.18
SCARB2-213ENST00000638680 H1FOOQ8IZA3 346 aaPredicted RBP16.15■□□□□ 0.18
SCARB2-213ENST00000638680 THYN1Q9P016 225 aa16.15■□□□□ 0.18
SCARB2-213ENST00000638680 ZNF716A6NP11 495 aa16.15■□□□□ 0.18
SCARB2-213ENST00000638680 TMPRSS2O15393 492 aa16.15■□□□□ 0.18
SCARB2-213ENST00000638680 LIMS1P48059 325 aa16.15■□□□□ 0.18
SCARB2-213ENST00000638680 ZDHHC16Q969W1 377 aa16.15■□□□□ 0.18
SCARB2-213ENST00000638680 PGLYRP3Q96LB9 341 aa16.15■□□□□ 0.18
SCARB2-213ENST00000638680 FAM3BP58499 235 aaPredicted RBP16.15■□□□□ 0.18
SCARB2-213ENST00000638680 TGIF2LYQ8IUE0 185 aa16.15■□□□□ 0.18
SCARB2-213ENST00000638680 OR4X1Q8NH49 305 aa16.15■□□□□ 0.18
SCARB2-213ENST00000638680 MT-CO3P00414 261 aa16.15■□□□□ 0.18
SCARB2-213ENST00000638680 RNF122Q9H9V4 155 aa16.15■□□□□ 0.18
SCARB2-213ENST00000638680 FAM157AC9JC47 383 aa16.14■□□□□ 0.18
SCARB2-213ENST00000638680 TMEM108Q6UXF1 575 aa16.14■□□□□ 0.18
SCARB2-213ENST00000638680 ABHD3Q8WU67 409 aa16.14■□□□□ 0.18
SCARB2-213ENST00000638680 C5orf52A6NGY3 159 aa16.14■□□□□ 0.17
SCARB2-213ENST00000638680 J3QT63 122 aa16.14■□□□□ 0.17
SCARB2-213ENST00000638680 AGFG2O95081 481 aa16.14■□□□□ 0.17
SCARB2-213ENST00000638680 TRGC2P03986 189 aa16.14■□□□□ 0.17
SCARB2-213ENST00000638680 BMI1P35226 326 aa16.14■□□□□ 0.17
SCARB2-213ENST00000638680 ADAMTS17Q8TE56 1095 aa16.14■□□□□ 0.17
SCARB2-213ENST00000638680 ADAM11O75078 769 aa16.14■□□□□ 0.17
SCARB2-213ENST00000638680 CCL3P10147 92 aa16.14■□□□□ 0.17
SCARB2-213ENST00000638680 OR8A1Q8NGG7 326 aa16.14■□□□□ 0.17
SCARB2-213ENST00000638680 HSPB8Q9UJY1 196 aa16.14■□□□□ 0.17
SCARB2-213ENST00000638680 MAGEA5P43359 124 aa16.14■□□□□ 0.17
SCARB2-213ENST00000638680 VAX1Q5SQQ9 334 aa16.14■□□□□ 0.17
SCARB2-213ENST00000638680 TEPPQ6URK8 271 aa16.14■□□□□ 0.17
SCARB2-213ENST00000638680 MOGAT3Q86VF5 341 aa16.14■□□□□ 0.17
SCARB2-213ENST00000638680 LDLRAD3Q86YD5 345 aa16.14■□□□□ 0.17
SCARB2-213ENST00000638680 OR2M3Q8NG83 312 aa16.14■□□□□ 0.17
SCARB2-213ENST00000638680 OR52L2PQ8NGH6 319 aa16.14■□□□□ 0.17
SCARB2-213ENST00000638680 CT55Q8WUE5 264 aa16.14■□□□□ 0.17
SCARB2-213ENST00000638680 ZFC3H1O60293 1989 aaKnown RBP16.14■□□□□ 0.17
SCARB2-213ENST00000638680 NINQ8N4C6 2090 aa16.14■□□□□ 0.17
SCARB2-213ENST00000638680 A6NDN8 102 aa16.14■□□□□ 0.17
SCARB2-213ENST00000638680 GCM2O75603 506 aaPredicted RBP16.14■□□□□ 0.17
SCARB2-213ENST00000638680 CYB5R3P00387 301 aaPredicted RBP16.14■□□□□ 0.17
SCARB2-213ENST00000638680 ZNF137PP52743 207 aa16.14■□□□□ 0.17
SCARB2-213ENST00000638680 OR2I1PQ8NGU4 316 aa16.14■□□□□ 0.17
SCARB2-213ENST00000638680 LHX9Q9NQ69 397 aa16.14■□□□□ 0.17
SCARB2-213ENST00000638680 FSCN3Q9NQT6 498 aa16.14■□□□□ 0.17
SCARB2-213ENST00000638680 SH2D7A6NKC9 451 aaPredicted RBP16.13■□□□□ 0.17
SCARB2-213ENST00000638680 SPINT1O43278 529 aa16.13■□□□□ 0.17
SCARB2-213ENST00000638680 MELTFP08582 738 aa16.13■□□□□ 0.17
SCARB2-213ENST00000638680 RBM11P57052 281 aaKnown RBP16.13■□□□□ 0.17
SCARB2-213ENST00000638680 PAPPAQ13219 1627 aa16.13■□□□□ 0.17
SCARB2-213ENST00000638680 KIF13BQ9NQT8 1826 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms