RNA–Protein interactions for RNA: ENST00000638009.1

CACNA1A-257, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,665 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-257ENST00000638009 RBMY1DP0C7P1 496 aaKnown RBP17.19■□□□□ 0.34
CACNA1A-257ENST00000638009 RBMY1A1P0DJD3 496 aaKnown RBP17.19■□□□□ 0.34
CACNA1A-257ENST00000638009 RBMY1CP0DJD4 496 aa17.19■□□□□ 0.34
CACNA1A-257ENST00000638009 SMIM18P0DKX4 95 aa17.19■□□□□ 0.34
CACNA1A-257ENST00000638009 GFRALQ6UXV0 394 aa17.19■□□□□ 0.34
CACNA1A-257ENST00000638009 PITX3O75364 302 aa17.19■□□□□ 0.34
CACNA1A-257ENST00000638009 AVPR2P30518 371 aa17.19■□□□□ 0.34
CACNA1A-257ENST00000638009 SLC25A17O43808 307 aa17.19■□□□□ 0.34
CACNA1A-257ENST00000638009 ICOSLGO75144 302 aa17.19■□□□□ 0.34
CACNA1A-257ENST00000638009 SPRY3O43610 288 aa17.19■□□□□ 0.34
CACNA1A-257ENST00000638009 SLC39A5Q6ZMH5 540 aa17.19■□□□□ 0.34
CACNA1A-257ENST00000638009 C12orf76Q8N812 135 aaPredicted RBP17.19■□□□□ 0.34
CACNA1A-257ENST00000638009 PRSS21Q9Y6M0 314 aa17.19■□□□□ 0.34
CACNA1A-257ENST00000638009 PSME4Q14997 1843 aa17.19■□□□□ 0.34
CACNA1A-257ENST00000638009 CD27P26842 260 aa17.18■□□□□ 0.34
CACNA1A-257ENST00000638009 OR2V1Q8NHB1 315 aa17.18■□□□□ 0.34
CACNA1A-257ENST00000638009 SBF1O95248 1867 aa17.18■□□□□ 0.34
CACNA1A-257ENST00000638009 SSC5DA1L4H1 1573 aa17.18■□□□□ 0.34
CACNA1A-257ENST00000638009 CFDP00746 253 aaPredicted RBP17.18■□□□□ 0.34
CACNA1A-257ENST00000638009 NPPBP16860 134 aa17.18■□□□□ 0.34
CACNA1A-257ENST00000638009 MUC20Q8N307 709 aaPredicted RBP17.18■□□□□ 0.34
CACNA1A-257ENST00000638009 OR1L8Q8NGR8 309 aa17.18■□□□□ 0.34
CACNA1A-257ENST00000638009 H3BQ15 152 aa17.18■□□□□ 0.34
CACNA1A-257ENST00000638009 DHCR7Q9UBM7 475 aaKnown RBP17.18■□□□□ 0.34
CACNA1A-257ENST00000638009 MOSPD3O75425 235 aa17.18■□□□□ 0.34
CACNA1A-257ENST00000638009 TRGC1P0CF51 173 aa17.18■□□□□ 0.34
CACNA1A-257ENST00000638009 PCBP3P57721 371 aaKnown RBP17.18■□□□□ 0.34
CACNA1A-257ENST00000638009 GNG10P50151 68 aa17.18■□□□□ 0.34
CACNA1A-257ENST00000638009 DLX6P56179 175 aa17.18■□□□□ 0.34
CACNA1A-257ENST00000638009 SIGLEC11Q96RL6 698 aa17.18■□□□□ 0.34
CACNA1A-257ENST00000638009 ARL6IP6Q8N6S5 226 aa17.18■□□□□ 0.34
CACNA1A-257ENST00000638009 RBKSQ9H477 322 aa17.18■□□□□ 0.34
CACNA1A-257ENST00000638009 LINC00862A6NCI5 91 aa17.18■□□□□ 0.34
CACNA1A-257ENST00000638009 CDKN2AP42771 156 aaKnown RBP17.18■□□□□ 0.34
CACNA1A-257ENST00000638009 EIF3IQ13347 325 aaKnown RBP17.18■□□□□ 0.34
CACNA1A-257ENST00000638009 SMUG1Q53HV7 270 aa17.18■□□□□ 0.34
CACNA1A-257ENST00000638009 RTN4RL1Q86UN2 441 aaPredicted RBP17.18■□□□□ 0.34
CACNA1A-257ENST00000638009 BADQ92934 168 aa17.18■□□□□ 0.34
CACNA1A-257ENST00000638009 SELENOTP62341 195 aa17.17■□□□□ 0.34
CACNA1A-257ENST00000638009 MRPL54Q6P161 138 aaKnown RBP17.17■□□□□ 0.34
CACNA1A-257ENST00000638009 LHFPL5Q8TAF8 219 aa17.17■□□□□ 0.34
CACNA1A-257ENST00000638009 LINC00052Q96N35 136 aa17.17■□□□□ 0.34
CACNA1A-257ENST00000638009 SLC26A1Q9H2B4 701 aa17.17■□□□□ 0.34
CACNA1A-257ENST00000638009 CHST1O43916 411 aa17.17■□□□□ 0.34
CACNA1A-257ENST00000638009 WNT5BQ9H1J7 359 aa17.17■□□□□ 0.34
CACNA1A-257ENST00000638009 STARD10Q9Y365 291 aa17.17■□□□□ 0.34
CACNA1A-257ENST00000638009 DENND4AQ7Z401 1863 aa17.17■□□□□ 0.34
CACNA1A-257ENST00000638009 USF3Q68DE3 2245 aa17.17■□□□□ 0.34
CACNA1A-257ENST00000638009 CTAG2O75638 210 aa17.17■□□□□ 0.34
CACNA1A-257ENST00000638009 DLEU7Q6UYE1 221 aa17.17■□□□□ 0.34
CACNA1A-257ENST00000638009 GLRX2Q9NS18 164 aa17.17■□□□□ 0.34
CACNA1A-257ENST00000638009 IGHV4-34P06331 123 aa17.17■□□□□ 0.34
CACNA1A-257ENST00000638009 TSPOP30536 169 aa17.17■□□□□ 0.34
CACNA1A-257ENST00000638009 OR8B2Q96RD0 313 aa17.17■□□□□ 0.34
CACNA1A-257ENST00000638009 DDX60LQ5H9U9 1706 aaKnown RBP17.17■□□□□ 0.34
CACNA1A-257ENST00000638009 TMEM272A0A1B0GTI8 110 aa17.17■□□□□ 0.34
CACNA1A-257ENST00000638009 H3BRM9 83 aa17.17■□□□□ 0.34
CACNA1A-257ENST00000638009 CDS2O95674 445 aa17.17■□□□□ 0.34
CACNA1A-257ENST00000638009 ANKRD37Q7Z713 158 aa17.17■□□□□ 0.34
CACNA1A-257ENST00000638009 MGST2Q99735 147 aa17.17■□□□□ 0.34
CACNA1A-257ENST00000638009 ISG20L2Q9H9L3 353 aaKnown RBP17.17■□□□□ 0.34
CACNA1A-257ENST00000638009 OPN4Q9UHM6 478 aa17.17■□□□□ 0.34
CACNA1A-257ENST00000638009 NCMAPQ5T1S8 102 aa17.17■□□□□ 0.34
CACNA1A-257ENST00000638009 C16orf82Q7Z2V1 217 aa17.17■□□□□ 0.34
CACNA1A-257ENST00000638009 NKAIN4Q8IVV8 208 aa17.17■□□□□ 0.34
CACNA1A-257ENST00000638009 R3HDM4Q96D70 268 aa17.17■□□□□ 0.34
CACNA1A-257ENST00000638009 HELZP42694 1942 aaKnown RBP17.16■□□□□ 0.34
CACNA1A-257ENST00000638009 DDTP30046 118 aa17.16■□□□□ 0.34
CACNA1A-257ENST00000638009 OR8G5Q8NG78 346 aa17.16■□□□□ 0.34
CACNA1A-257ENST00000638009 HIGD1AQ9Y241 93 aa17.16■□□□□ 0.34
CACNA1A-257ENST00000638009 KCNK7Q9Y2U2 307 aa17.16■□□□□ 0.34
CACNA1A-257ENST00000638009 NRG2O14511 850 aaPredicted RBP17.16■□□□□ 0.34
CACNA1A-257ENST00000638009 TNXAQ16473 311 aa17.16■□□□□ 0.34
CACNA1A-257ENST00000638009 MS4A6EQ96DS6 147 aa17.16■□□□□ 0.34
CACNA1A-257ENST00000638009 RHBDD2Q6NTF9 364 aa17.16■□□□□ 0.34
CACNA1A-257ENST00000638009 OR4X1Q8NH49 305 aa17.16■□□□□ 0.34
CACNA1A-257ENST00000638009 SLC37A2Q8TED4 501 aa17.16■□□□□ 0.34
CACNA1A-257ENST00000638009 ZMIZ1Q9ULJ6 1067 aa17.16■□□□□ 0.34
CACNA1A-257ENST00000638009 B9D1Q9UPM9 204 aa17.16■□□□□ 0.34
CACNA1A-257ENST00000638009 PRNTQ86SH4 94 aa17.16■□□□□ 0.34
CACNA1A-257ENST00000638009 TNFAIP6P98066 277 aaPredicted RBP17.16■□□□□ 0.34
CACNA1A-257ENST00000638009 DPTQ07507 201 aa17.16■□□□□ 0.34
CACNA1A-257ENST00000638009 ST3GAL2Q16842 350 aa17.16■□□□□ 0.34
CACNA1A-257ENST00000638009 SP6Q3SY56 376 aa17.16■□□□□ 0.34
CACNA1A-257ENST00000638009 OR4A5Q8NH83 315 aa17.16■□□□□ 0.34
CACNA1A-257ENST00000638009 WIPI2Q9Y4P8 454 aa17.16■□□□□ 0.34
CACNA1A-257ENST00000638009 CD74P04233 296 aa17.16■□□□□ 0.34
CACNA1A-257ENST00000638009 ARG1P05089 322 aa17.16■□□□□ 0.34
CACNA1A-257ENST00000638009 CSNK1EP49674 416 aaKnown RBP17.16■□□□□ 0.34
CACNA1A-257ENST00000638009 H7C1H1 209 aa17.15■□□□□ 0.34
CACNA1A-257ENST00000638009 CDC14BO60729 498 aa17.15■□□□□ 0.34
CACNA1A-257ENST00000638009 DDB2Q92466 427 aa17.15■□□□□ 0.34
CACNA1A-257ENST00000638009 INSIG2Q9Y5U4 225 aa17.15■□□□□ 0.34
CACNA1A-257ENST00000638009 OR5A1Q8NGJ0 315 aa17.15■□□□□ 0.34
CACNA1A-257ENST00000638009 TRAF4Q9BUZ4 470 aaPredicted RBP17.15■□□□□ 0.34
CACNA1A-257ENST00000638009 CXXC4Q9H2H0 198 aa17.15■□□□□ 0.34
CACNA1A-257ENST00000638009 A0A087WUJ7 227 aa17.15■□□□□ 0.34
CACNA1A-257ENST00000638009 TMEM189A5PLL7 270 aa17.15■□□□□ 0.34
CACNA1A-257ENST00000638009 HSPB9Q9BQS6 159 aa17.15■□□□□ 0.34
CACNA1A-257ENST00000638009 A0A1B0GV90 55 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms