RNA–Protein interactions for RNA: ENST00000637988.1

SCN1A-217, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,562 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-217ENST00000637988 C3orf85A0A1B0GTC6 90 aa5.39□□□□□ -1.55
SCN1A-217ENST00000637988 TCRBV4S1A1TA0A5B7 111 aa5.39□□□□□ -1.55
SCN1A-217ENST00000637988 IGHA1P01876 353 aa5.39□□□□□ -1.55
SCN1A-217ENST00000637988 IGHA2P01877 340 aa5.39□□□□□ -1.55
SCN1A-217ENST00000637988 MELTFP08582 738 aa5.39□□□□□ -1.55
SCN1A-217ENST00000637988 PCOLCEQ15113 449 aa5.39□□□□□ -1.55
SCN1A-217ENST00000637988 TMEM128Q5BJH2 165 aa5.39□□□□□ -1.55
SCN1A-217ENST00000637988 TEX30Q5JUR7 227 aa5.39□□□□□ -1.55
SCN1A-217ENST00000637988 ALKAL2Q6UX46 152 aa5.39□□□□□ -1.55
SCN1A-217ENST00000637988 ARRDC1Q8N5I2 433 aa5.39□□□□□ -1.55
SCN1A-217ENST00000637988 ZBTB34Q8NCN2 500 aa5.39□□□□□ -1.55
SCN1A-217ENST00000637988 OR51B2Q9Y5P1 312 aa5.39□□□□□ -1.55
SCN1A-217ENST00000637988 CDIPTO14735 213 aa5.39□□□□□ -1.55
SCN1A-217ENST00000637988 SYNGR3O43761 229 aa5.39□□□□□ -1.55
SCN1A-217ENST00000637988 ICMTO60725 284 aa5.39□□□□□ -1.55
SCN1A-217ENST00000637988 CCKARP32238 428 aa5.39□□□□□ -1.55
SCN1A-217ENST00000637988 ZNF137PP52743 207 aa5.39□□□□□ -1.55
SCN1A-217ENST00000637988 ZNF561Q8N587 486 aa5.39□□□□□ -1.55
SCN1A-217ENST00000637988 GBGT1Q8N5D6 347 aa5.39□□□□□ -1.55
SCN1A-217ENST00000637988 SSBP3Q9BWW4 388 aaPredicted RBP5.39□□□□□ -1.55
SCN1A-217ENST00000637988 SLC17A5Q9NRA2 495 aa5.39□□□□□ -1.55
SCN1A-217ENST00000637988 METTL1Q9UBP6 276 aaKnown RBP5.39□□□□□ -1.55
SCN1A-217ENST00000637988 ZGRF1Q86YA3 2104 aa5.39□□□□□ -1.55
SCN1A-217ENST00000637988 COL22A1Q8NFW1 1626 aaPredicted RBP5.39□□□□□ -1.55
SCN1A-217ENST00000637988 PPP6CO00743 305 aa5.39□□□□□ -1.55
SCN1A-217ENST00000637988 FFAR1O14842 300 aa5.39□□□□□ -1.55
SCN1A-217ENST00000637988 CFDP00746 253 aaPredicted RBP5.39□□□□□ -1.55
SCN1A-217ENST00000637988 THY1P04216 161 aa5.39□□□□□ -1.55
SCN1A-217ENST00000637988 INHBBP09529 407 aa5.39□□□□□ -1.55
SCN1A-217ENST00000637988 GIPP09681 153 aaPredicted RBP5.39□□□□□ -1.55
SCN1A-217ENST00000637988 CYB5R2Q6BCY4 276 aa5.39□□□□□ -1.55
SCN1A-217ENST00000637988 ZNF429Q86V71 674 aa5.39□□□□□ -1.55
SCN1A-217ENST00000637988 OR4X1Q8NH49 305 aa5.39□□□□□ -1.55
SCN1A-217ENST00000637988 MAP1LC3CQ9BXW4 147 aa5.39□□□□□ -1.55
SCN1A-217ENST00000637988 NXF2Q9GZY0 626 aaKnown RBP5.39□□□□□ -1.55
SCN1A-217ENST00000637988 LYRM2Q9NU23 88 aaPredicted RBP5.39□□□□□ -1.55
SCN1A-217ENST00000637988 ABCA1O95477 2261 aa5.39□□□□□ -1.55
SCN1A-217ENST00000637988 MFNGO00587 321 aa5.39□□□□□ -1.55
SCN1A-217ENST00000637988 CRPP02741 224 aa5.39□□□□□ -1.55
SCN1A-217ENST00000637988 PSG9Q00887 426 aa5.39□□□□□ -1.55
SCN1A-217ENST00000637988 TOR2AQ5JU69 321 aa5.39□□□□□ -1.55
SCN1A-217ENST00000637988 FAM209BQ5JX69 171 aa5.39□□□□□ -1.55
SCN1A-217ENST00000637988 NTNG2Q96CW9 530 aa5.39□□□□□ -1.55
SCN1A-217ENST00000637988 YIPF6Q96EC8 236 aa5.39□□□□□ -1.55
SCN1A-217ENST00000637988 OR10C1Q96KK4 312 aa5.39□□□□□ -1.55
SCN1A-217ENST00000637988 GPR137Q96N19 417 aa5.39□□□□□ -1.55
SCN1A-217ENST00000637988 C2orf88Q9BSF0 95 aa5.39□□□□□ -1.55
SCN1A-217ENST00000637988 CACNG5Q9UF02 275 aa5.39□□□□□ -1.55
SCN1A-217ENST00000637988 COL6A6A6NMZ7 2263 aa5.38□□□□□ -1.55
SCN1A-217ENST00000637988 IGKV3D-11A0A0A0MRZ8 115 aa5.38□□□□□ -1.55
SCN1A-217ENST00000637988 IGHV1-69-2A0A0G2JMI3 117 aa5.38□□□□□ -1.55
SCN1A-217ENST00000637988 A0A1W2PRX2 142 aa5.38□□□□□ -1.55
SCN1A-217ENST00000637988 IFITM5A6NNB3 132 aa5.38□□□□□ -1.55
SCN1A-217ENST00000637988 IGKV3-11P04433 115 aa5.38□□□□□ -1.55
SCN1A-217ENST00000637988 CRHP06850 196 aa5.38□□□□□ -1.55
SCN1A-217ENST00000637988 CISD3P0C7P0 127 aa5.38□□□□□ -1.55
SCN1A-217ENST00000637988 CD80P33681 288 aa5.38□□□□□ -1.55
SCN1A-217ENST00000637988 LIMK1P53667 647 aa5.38□□□□□ -1.55
SCN1A-217ENST00000637988 KRTDAPP60985 99 aa5.38□□□□□ -1.55
SCN1A-217ENST00000637988 TMUB2Q71RG4 321 aa5.38□□□□□ -1.55
SCN1A-217ENST00000637988 OR5A2Q8NGI9 324 aa5.38□□□□□ -1.55
SCN1A-217ENST00000637988 RASL12Q9NYN1 266 aa5.38□□□□□ -1.55
SCN1A-217ENST00000637988 TINAGQ9UJW2 476 aa5.38□□□□□ -1.55
SCN1A-217ENST00000637988 TRAPPC1Q9Y5R8 145 aa5.38□□□□□ -1.55
SCN1A-217ENST00000637988 MRPS18BQ9Y676 258 aaKnown RBP5.38□□□□□ -1.55
SCN1A-217ENST00000637988 U3KQ87 197 aa5.38□□□□□ -1.55
SCN1A-217ENST00000637988 CHD3Q12873 2000 aaKnown RBP5.38□□□□□ -1.55
SCN1A-217ENST00000637988 A0A1W2PQD3 144 aa5.38□□□□□ -1.55
SCN1A-217ENST00000637988 ZNF324O75467 553 aaPredicted RBP5.38□□□□□ -1.55
SCN1A-217ENST00000637988 CA11O75493 328 aa5.38□□□□□ -1.55
SCN1A-217ENST00000637988 MAS1LP35410 378 aa5.38□□□□□ -1.55
SCN1A-217ENST00000637988 ETV1P50549 477 aa5.38□□□□□ -1.55
SCN1A-217ENST00000637988 COL10A1Q03692 680 aa5.38□□□□□ -1.55
SCN1A-217ENST00000637988 OR4A47Q6IF82 309 aa5.38□□□□□ -1.55
SCN1A-217ENST00000637988 NRARPQ7Z6K4 114 aa5.38□□□□□ -1.55
SCN1A-217ENST00000637988 NANOGP1Q8N7R0 232 aa5.38□□□□□ -1.55
SCN1A-217ENST00000637988 RHOXF1Q8NHV9 184 aa5.38□□□□□ -1.55
SCN1A-217ENST00000637988 SLC25A32Q9H2D1 315 aa5.38□□□□□ -1.55
SCN1A-217ENST00000637988 MSL2Q9HCI7 577 aa5.38□□□□□ -1.55
SCN1A-217ENST00000637988 BET1LQ9NYM9 111 aa5.38□□□□□ -1.55
SCN1A-217ENST00000637988 SERGEFQ9UGK8 458 aa5.38□□□□□ -1.55
SCN1A-217ENST00000637988 MPZL1O95297 269 aa5.38□□□□□ -1.55
SCN1A-217ENST00000637988 HTN3P15516 51 aa5.38□□□□□ -1.55
SCN1A-217ENST00000637988 GZMKP49863 264 aa5.38□□□□□ -1.55
SCN1A-217ENST00000637988 SULT1A1P50225 295 aa5.38□□□□□ -1.55
SCN1A-217ENST00000637988 GAB4Q2WGN9 574 aa5.38□□□□□ -1.55
SCN1A-217ENST00000637988 ITLN2Q8WWU7 325 aaPredicted RBP5.38□□□□□ -1.55
SCN1A-217ENST00000637988 C14orf79Q96F83 325 aa5.38□□□□□ -1.55
SCN1A-217ENST00000637988 VSTM2LQ96N03 204 aa5.38□□□□□ -1.55
SCN1A-217ENST00000637988 SCNM1Q9BWG6 230 aa5.38□□□□□ -1.55
SCN1A-217ENST00000637988 PARP12Q9H0J9 701 aaKnown RBP5.38□□□□□ -1.55
SCN1A-217ENST00000637988 MMP24Q9Y5R2 645 aa5.38□□□□□ -1.55
SCN1A-217ENST00000637988 MPDZO75970 2070 aa5.38□□□□□ -1.55
SCN1A-217ENST00000637988 PGPA6NDG6 321 aa5.38□□□□□ -1.55
SCN1A-217ENST00000637988 OR2W5A6NFC9 320 aa5.38□□□□□ -1.55
SCN1A-217ENST00000637988 NOVP48745 357 aa5.38□□□□□ -1.55
SCN1A-217ENST00000637988 MFAP4P55083 255 aa5.38□□□□□ -1.55
SCN1A-217ENST00000637988 SLC37A1P57057 533 aa5.38□□□□□ -1.55
SCN1A-217ENST00000637988 SPINK9Q5DT21 86 aa5.38□□□□□ -1.55
SCN1A-217ENST00000637988 TMEM229BQ8NBD8 167 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms