RNA–Protein interactions for RNA: ENST00000637212.1

LINC00643-207, long intergenic non-protein coding RNA 643, humanhuman

BASIC

Gene LINC00643, Length 734 nt, Biotype transcribed unitary pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-207ENST00000637212 HLA-DMAP28067 261 aa11.09□□□□□ -0.63
LINC00643-207ENST00000637212 LMO4P61968 165 aa11.09□□□□□ -0.63
LINC00643-207ENST00000637212 RPL31P62899 125 aaKnown RBP11.09□□□□□ -0.63
LINC00643-207ENST00000637212 CDK10Q15131 360 aa11.09□□□□□ -0.63
LINC00643-207ENST00000637212 CLEC12BQ2HXU8 276 aa11.09□□□□□ -0.63
LINC00643-207ENST00000637212 RNASE10Q5GAN6 216 aaKnown RBP11.09□□□□□ -0.63
LINC00643-207ENST00000637212 OR52W1Q6IF63 320 aa11.09□□□□□ -0.63
LINC00643-207ENST00000637212 DHRS11Q6UWP2 260 aa11.09□□□□□ -0.63
LINC00643-207ENST00000637212 Q6ZPA2 131 aa11.09□□□□□ -0.63
LINC00643-207ENST00000637212 OVCH2Q7RTZ1 564 aa11.09□□□□□ -0.63
LINC00643-207ENST00000637212 OR5H2Q8NGV7 314 aa11.09□□□□□ -0.63
LINC00643-207ENST00000637212 TAF9BQ9HBM6 251 aa11.09□□□□□ -0.63
LINC00643-207ENST00000637212 NECAP2Q9NVZ3 263 aa11.09□□□□□ -0.63
LINC00643-207ENST00000637212 ING3Q9NXR8 418 aa11.09□□□□□ -0.63
LINC00643-207ENST00000637212 CLN8Q9UBY8 286 aa11.09□□□□□ -0.63
LINC00643-207ENST00000637212 TBC1D24Q9ULP9 559 aa11.09□□□□□ -0.63
LINC00643-207ENST00000637212 LINC00312Q9Y6C7 94 aa11.09□□□□□ -0.63
LINC00643-207ENST00000637212 DSCAMO60469 2012 aa11.09□□□□□ -0.63
LINC00643-207ENST00000637212 HRNRQ86YZ3 2850 aaPredicted RBP11.09□□□□□ -0.63
LINC00643-207ENST00000637212 IGKV1D-8A0A087WSZ0 117 aa11.08□□□□□ -0.64
LINC00643-207ENST00000637212 A0A1W2PPH5 198 aa11.08□□□□□ -0.64
LINC00643-207ENST00000637212 DISC1C4P0D8 188 aa11.08□□□□□ -0.64
LINC00643-207ENST00000637212 LYRM1O43325 122 aa11.08□□□□□ -0.64
LINC00643-207ENST00000637212 FCN3O75636 299 aa11.08□□□□□ -0.64
LINC00643-207ENST00000637212 IGHV2-5P01817 119 aa11.08□□□□□ -0.64
LINC00643-207ENST00000637212 IFNA6P05013 189 aa11.08□□□□□ -0.64
LINC00643-207ENST00000637212 HEXAP06865 529 aa11.08□□□□□ -0.64
LINC00643-207ENST00000637212 GSTT2P0CG29 244 aa11.08□□□□□ -0.64
LINC00643-207ENST00000637212 ARPC4P59998 168 aa11.08□□□□□ -0.64
LINC00643-207ENST00000637212 HMGN3Q15651 99 aa11.08□□□□□ -0.64
LINC00643-207ENST00000637212 ESCO2Q56NI9 601 aa11.08□□□□□ -0.64
LINC00643-207ENST00000637212 TMEM200BQ69YZ2 307 aa11.08□□□□□ -0.64
LINC00643-207ENST00000637212 TMEM17Q86X19 198 aa11.08□□□□□ -0.64
LINC00643-207ENST00000637212 POC5Q8NA72 575 aa11.08□□□□□ -0.64
LINC00643-207ENST00000637212 OR10A7Q8NGE5 316 aa11.08□□□□□ -0.64
LINC00643-207ENST00000637212 C8orf46Q8TAG6 207 aa11.08□□□□□ -0.64
LINC00643-207ENST00000637212 MAFIPQ8WZ33 124 aa11.08□□□□□ -0.64
LINC00643-207ENST00000637212 GALMQ96C23 342 aa11.08□□□□□ -0.64
LINC00643-207ENST00000637212 RAB39BQ96DA2 213 aa11.08□□□□□ -0.64
LINC00643-207ENST00000637212 DCTN5Q9BTE1 182 aa11.08□□□□□ -0.64
LINC00643-207ENST00000637212 KBTBD11-OT1A0A1B0GTJ5 212 aa11.07□□□□□ -0.64
LINC00643-207ENST00000637212 LINC00854A0A1B0GVQ3 168 aa11.07□□□□□ -0.64
LINC00643-207ENST00000637212 ZNF729A6NN14 1252 aaPredicted RBP11.07□□□□□ -0.64
LINC00643-207ENST00000637212 C15orf65H3BRN8 121 aa11.07□□□□□ -0.64
LINC00643-207ENST00000637212 SPINT2O43291 252 aa11.07□□□□□ -0.64
LINC00643-207ENST00000637212 PMP2P02689 132 aa11.07□□□□□ -0.64
LINC00643-207ENST00000637212 FCER2P06734 321 aa11.07□□□□□ -0.64
LINC00643-207ENST00000637212 SCTP09683 121 aa11.07□□□□□ -0.64
LINC00643-207ENST00000637212 HRH1P35367 487 aa11.07□□□□□ -0.64
LINC00643-207ENST00000637212 GNB2P62879 340 aa11.07□□□□□ -0.64
LINC00643-207ENST00000637212 HLA-DRB3P79483 266 aa11.07□□□□□ -0.64
LINC00643-207ENST00000637212 HTD2P86397 168 aa11.07□□□□□ -0.64
LINC00643-207ENST00000637212 RGS21Q2M5E4 152 aa11.07□□□□□ -0.64
LINC00643-207ENST00000637212 TMEM30BQ3MIR4 351 aa11.07□□□□□ -0.64
LINC00643-207ENST00000637212 CRYBG3Q68DQ2 2970 aa11.07□□□□□ -0.64
LINC00643-207ENST00000637212 BTN2A1Q7KYR7 527 aa11.07□□□□□ -0.64
LINC00643-207ENST00000637212 ARRDC1Q8N5I2 433 aa11.07□□□□□ -0.64
LINC00643-207ENST00000637212 TPRX1Q8N7U7 411 aa11.07□□□□□ -0.64
LINC00643-207ENST00000637212 LY6G5BQ8NDX9 201 aa11.07□□□□□ -0.64
LINC00643-207ENST00000637212 OR13A1Q8NGR1 328 aa11.07□□□□□ -0.64
LINC00643-207ENST00000637212 CLDND2Q8NHS1 167 aa11.07□□□□□ -0.64
LINC00643-207ENST00000637212 MRGPRDQ8TDS7 321 aa11.07□□□□□ -0.64
LINC00643-207ENST00000637212 GIMAP1Q8WWP7 306 aa11.07□□□□□ -0.64
LINC00643-207ENST00000637212 ARL11Q969Q4 196 aa11.07□□□□□ -0.64
LINC00643-207ENST00000637212 SSBP3Q9BWW4 388 aaPredicted RBP11.07□□□□□ -0.64
LINC00643-207ENST00000637212 C11orf54Q9H0W9 315 aaPredicted RBP11.07□□□□□ -0.64
LINC00643-207ENST00000637212 CHD3Q12873 2000 aaKnown RBP11.07□□□□□ -0.64
LINC00643-207ENST00000637212 LOC105371242A0A075B767 164 aa11.06□□□□□ -0.64
LINC00643-207ENST00000637212 IGHV4-30-2A0A087WSY4 118 aa11.06□□□□□ -0.64
LINC00643-207ENST00000637212 TRAV39A0A0B4J263 110 aa11.06□□□□□ -0.64
LINC00643-207ENST00000637212 C12orf77C9JDV5 145 aa11.06□□□□□ -0.64
LINC00643-207ENST00000637212 NPIPB11E5RHQ5 1161 aa11.06□□□□□ -0.64
LINC00643-207ENST00000637212 M0QYG6 137 aa11.06□□□□□ -0.64
LINC00643-207ENST00000637212 PTTG1O95997 202 aa11.06□□□□□ -0.64
LINC00643-207ENST00000637212 HBZP02008 142 aa11.06□□□□□ -0.64
LINC00643-207ENST00000637212 ZNF735P0CB33 412 aa11.06□□□□□ -0.64
LINC00643-207ENST00000637212 OR5H8P0DN80 308 aa11.06□□□□□ -0.64
LINC00643-207ENST00000637212 USF1P22415 310 aaPredicted RBP11.06□□□□□ -0.64
LINC00643-207ENST00000637212 RFX2P48378 723 aa11.06□□□□□ -0.64
LINC00643-207ENST00000637212 SEC61A1P61619 476 aaKnown RBP11.06□□□□□ -0.64
LINC00643-207ENST00000637212 FGFRL1Q8N441 504 aa11.06□□□□□ -0.64
LINC00643-207ENST00000637212 DUSP18Q8NEJ0 188 aa11.06□□□□□ -0.64
LINC00643-207ENST00000637212 OR4C16Q8NGL9 310 aa11.06□□□□□ -0.64
LINC00643-207ENST00000637212 OR6F1Q8NGZ6 308 aa11.06□□□□□ -0.64
LINC00643-207ENST00000637212 H1FXQ92522 213 aaKnown RBP11.06□□□□□ -0.64
LINC00643-207ENST00000637212 PRRT1Q99946 306 aa11.06□□□□□ -0.64
LINC00643-207ENST00000637212 FOXC2Q99958 501 aa11.06□□□□□ -0.64
LINC00643-207ENST00000637212 CABLES2Q9BTV7 478 aa11.06□□□□□ -0.64
LINC00643-207ENST00000637212 TINAGL1Q9GZM7 467 aaPredicted RBP11.06□□□□□ -0.64
LINC00643-207ENST00000637212 TOLLIPQ9H0E2 274 aa11.06□□□□□ -0.64
LINC00643-207ENST00000637212 GAL3ST2Q9H3Q3 398 aa11.06□□□□□ -0.64
LINC00643-207ENST00000637212 C19orf12Q9NSK7 152 aa11.06□□□□□ -0.64
LINC00643-207ENST00000637212 SLC2A8Q9NY64 477 aa11.06□□□□□ -0.64
LINC00643-207ENST00000637212 SCP2D1Q9UJQ7 156 aa11.06□□□□□ -0.64
LINC00643-207ENST00000637212 POLR3KQ9Y2Y1 108 aaPredicted RBP11.06□□□□□ -0.64
LINC00643-207ENST00000637212 USF3Q68DE3 2245 aa11.06□□□□□ -0.64
LINC00643-207ENST00000637212 CELSR2Q9HCU4 2923 aa11.06□□□□□ -0.64
LINC00643-207ENST00000637212 LRBAP50851 2863 aa11.06□□□□□ -0.64
LINC00643-207ENST00000637212 CREBBPQ92793 2442 aa11.05□□□□□ -0.64
LINC00643-207ENST00000637212 ABCA12Q86UK0 2595 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms