RNA–Protein interactions for RNA: ENST00000635776.1

SCN1A-210, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1A, Length 10,107 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-210ENST00000635776 A0A0G2JMM0 328 aa3.9□□□□□ -1.78
SCN1A-210ENST00000635776 A0A1W2PPB8 328 aa3.9□□□□□ -1.78
SCN1A-210ENST00000635776 A0A1W2PRS3 328 aa3.9□□□□□ -1.78
SCN1A-210ENST00000635776 KIR3DP1A8MWS1 328 aa3.9□□□□□ -1.78
SCN1A-210ENST00000635776 MPDU1O75352 247 aa3.9□□□□□ -1.78
SCN1A-210ENST00000635776 CFDP00746 253 aaPredicted RBP3.9□□□□□ -1.78
SCN1A-210ENST00000635776 GPR12P47775 334 aa3.9□□□□□ -1.78
SCN1A-210ENST00000635776 ZNF146Q15072 292 aa3.9□□□□□ -1.78
SCN1A-210ENST00000635776 IGFL3Q6UXB1 125 aa3.9□□□□□ -1.78
SCN1A-210ENST00000635776 ASCL5Q7RTU5 278 aa3.9□□□□□ -1.78
SCN1A-210ENST00000635776 SLC35G3Q8N808 338 aa3.9□□□□□ -1.78
SCN1A-210ENST00000635776 C22orf15Q8WYQ4 148 aa3.9□□□□□ -1.78
SCN1A-210ENST00000635776 SMIM3Q9BZL3 60 aa3.9□□□□□ -1.78
SCN1A-210ENST00000635776 PLSCR4Q9NRQ2 329 aa3.9□□□□□ -1.78
SCN1A-210ENST00000635776 A0A087WV48 116 aa3.9□□□□□ -1.78
SCN1A-210ENST00000635776 TRGV10A0A0A0MS01 117 aa3.9□□□□□ -1.78
SCN1A-210ENST00000635776 FAM90A9PA6NNJ1 464 aa3.9□□□□□ -1.78
SCN1A-210ENST00000635776 CEBPZOSA8MTT3 80 aa3.9□□□□□ -1.78
SCN1A-210ENST00000635776 NDUFA2O43678 99 aa3.9□□□□□ -1.78
SCN1A-210ENST00000635776 OR2B8PP59922 312 aa3.9□□□□□ -1.78
SCN1A-210ENST00000635776 HIKESHIQ53FT3 197 aa3.9□□□□□ -1.78
SCN1A-210ENST00000635776 IGFL2Q6UWQ7 119 aa3.9□□□□□ -1.78
SCN1A-210ENST00000635776 H1FOOQ8IZA3 346 aaPredicted RBP3.9□□□□□ -1.78
SCN1A-210ENST00000635776 C15orf54Q8N8G6 183 aa3.9□□□□□ -1.78
SCN1A-210ENST00000635776 SAV1Q9H4B6 383 aaPredicted RBP3.9□□□□□ -1.78
SCN1A-210ENST00000635776 FKBP11Q9NYL4 201 aa3.9□□□□□ -1.78
SCN1A-210ENST00000635776 CLEC18AA5D8T8 446 aa3.9□□□□□ -1.78
SCN1A-210ENST00000635776 IL18BPO95998 194 aa3.9□□□□□ -1.78
SCN1A-210ENST00000635776 CLEC18CQ8NCF0 446 aa3.9□□□□□ -1.78
SCN1A-210ENST00000635776 GINS3Q9BRX5 216 aa3.9□□□□□ -1.78
SCN1A-210ENST00000635776 ZDHHC8Q9ULC8 765 aa3.9□□□□□ -1.78
SCN1A-210ENST00000635776 ABCD4O14678 606 aa3.9□□□□□ -1.79
SCN1A-210ENST00000635776 SMPD2O60906 423 aa3.9□□□□□ -1.79
SCN1A-210ENST00000635776 HRASP01112 189 aa3.9□□□□□ -1.79
SCN1A-210ENST00000635776 EPHA1P21709 976 aa3.9□□□□□ -1.79
SCN1A-210ENST00000635776 PTAFRP25105 342 aa3.9□□□□□ -1.79
SCN1A-210ENST00000635776 S100A7P31151 101 aa3.9□□□□□ -1.79
SCN1A-210ENST00000635776 GLRXP35754 106 aa3.9□□□□□ -1.79
SCN1A-210ENST00000635776 ZNF436-AS1Q8NC38 126 aaPredicted RBP3.9□□□□□ -1.79
SCN1A-210ENST00000635776 TCTEX1D2Q8WW35 142 aa3.9□□□□□ -1.79
SCN1A-210ENST00000635776 PSMG3Q9BT73 122 aaPredicted RBP3.9□□□□□ -1.79
SCN1A-210ENST00000635776 OR51I2Q9H344 312 aa3.9□□□□□ -1.79
SCN1A-210ENST00000635776 TP53TG5Q9Y2B4 290 aa3.9□□□□□ -1.79
SCN1A-210ENST00000635776 FAM221AA4D161 298 aa3.9□□□□□ -1.79
SCN1A-210ENST00000635776 ADAM20O43506 726 aa3.9□□□□□ -1.79
SCN1A-210ENST00000635776 OR8U8P0C7N1 319 aa3.9□□□□□ -1.79
SCN1A-210ENST00000635776 NEIL1Q96FI4 390 aaPredicted RBP3.9□□□□□ -1.79
SCN1A-210ENST00000635776 OR10C1Q96KK4 312 aa3.9□□□□□ -1.79
SCN1A-210ENST00000635776 OR5B12Q96R08 314 aa3.9□□□□□ -1.79
SCN1A-210ENST00000635776 NRIP2Q9BQI9 281 aa3.9□□□□□ -1.79
SCN1A-210ENST00000635776 SOX7Q9BT81 388 aa3.9□□□□□ -1.79
SCN1A-210ENST00000635776 SLC35B3Q9H1N7 401 aa3.9□□□□□ -1.79
SCN1A-210ENST00000635776 GAL3ST2Q9H3Q3 398 aa3.9□□□□□ -1.79
SCN1A-210ENST00000635776 CCL28Q9NRJ3 127 aa3.9□□□□□ -1.79
SCN1A-210ENST00000635776 RNF7Q9UBF6 113 aa3.9□□□□□ -1.79
SCN1A-210ENST00000635776 WIPI2Q9Y4P8 454 aa3.9□□□□□ -1.79
SCN1A-210ENST00000635776 OR2H2O95918 312 aa3.9□□□□□ -1.79
SCN1A-210ENST00000635776 PGA5P0DJD9 388 aa3.9□□□□□ -1.79
SCN1A-210ENST00000635776 GUK1Q16774 197 aa3.9□□□□□ -1.79
SCN1A-210ENST00000635776 ZNF837Q96EG3 531 aaPredicted RBP3.9□□□□□ -1.79
SCN1A-210ENST00000635776 C18orf12Q96KH6 178 aa3.9□□□□□ -1.79
SCN1A-210ENST00000635776 OR2J1Q9GZK6 312 aa3.9□□□□□ -1.79
SCN1A-210ENST00000635776 DUSP13Q9UII6 198 aa3.9□□□□□ -1.79
SCN1A-210ENST00000635776 TIMM9Q9Y5J7 89 aa3.9□□□□□ -1.79
SCN1A-210ENST00000635776 CDIPTO14735 213 aa3.9□□□□□ -1.79
SCN1A-210ENST00000635776 PGLYRP1O75594 196 aaPredicted RBP3.9□□□□□ -1.79
SCN1A-210ENST00000635776 CLDN1O95832 211 aa3.9□□□□□ -1.79
SCN1A-210ENST00000635776 APOA2P02652 100 aa3.9□□□□□ -1.79
SCN1A-210ENST00000635776 FAM234AQ9H0X4 552 aa3.9□□□□□ -1.79
SCN1A-210ENST00000635776 SLC39A9Q9NUM3 307 aa3.9□□□□□ -1.79
SCN1A-210ENST00000635776 PRSS50Q9UI38 385 aa3.9□□□□□ -1.79
SCN1A-210ENST00000635776 hADV38S2A0JD32 116 aa3.89□□□□□ -1.79
SCN1A-210ENST00000635776 IFNA4P05014 189 aa3.89□□□□□ -1.79
SCN1A-210ENST00000635776 HEXAP06865 529 aa3.89□□□□□ -1.79
SCN1A-210ENST00000635776 CD80P33681 288 aa3.89□□□□□ -1.79
SCN1A-210ENST00000635776 TIMP3P35625 211 aa3.89□□□□□ -1.79
SCN1A-210ENST00000635776 CEACAM6P40199 344 aa3.89□□□□□ -1.79
SCN1A-210ENST00000635776 LYZL2Q7Z4W2 148 aa3.89□□□□□ -1.79
SCN1A-210ENST00000635776 PIP4P1Q86T03 277 aa3.89□□□□□ -1.79
SCN1A-210ENST00000635776 CALHM1Q8IU99 346 aa3.89□□□□□ -1.79
SCN1A-210ENST00000635776 SELENOHQ8IZQ5 122 aaKnown RBP3.89□□□□□ -1.79
SCN1A-210ENST00000635776 TMEM252Q8N6L7 170 aa3.89□□□□□ -1.79
SCN1A-210ENST00000635776 LRRC29Q8WV35 223 aa3.89□□□□□ -1.79
SCN1A-210ENST00000635776 TMEM147Q9BVK8 224 aa3.89□□□□□ -1.79
SCN1A-210ENST00000635776 RBFOX2O43251 390 aaKnown RBP eCLIP3.89□□□□□ -1.79
SCN1A-210ENST00000635776 DANCRP0C864 163 aa3.89□□□□□ -1.79
SCN1A-210ENST00000635776 TGIF1Q15583 401 aa3.89□□□□□ -1.79
SCN1A-210ENST00000635776 ACOT6Q3I5F7 207 aaPredicted RBP3.89□□□□□ -1.79
SCN1A-210ENST00000635776 TMPRSS7Q7RTY8 843 aa3.89□□□□□ -1.79
SCN1A-210ENST00000635776 ZNF645Q8N7E2 425 aa3.89□□□□□ -1.79
SCN1A-210ENST00000635776 SNRNP200O75643 2136 aaKnown RBP3.89□□□□□ -1.79
SCN1A-210ENST00000635776 ALPK3Q96L96 1907 aa3.89□□□□□ -1.79
SCN1A-210ENST00000635776 A0A1W2PPV4 95 aa3.89□□□□□ -1.79
SCN1A-210ENST00000635776 MBD3L4A6NDZ8 208 aaPredicted RBP3.89□□□□□ -1.79
SCN1A-210ENST00000635776 MBD3L3A6NE82 208 aaPredicted RBP3.89□□□□□ -1.79
SCN1A-210ENST00000635776 MBD3L5A6NJ08 208 aaPredicted RBP3.89□□□□□ -1.79
SCN1A-210ENST00000635776 CDRT15L2A8MXV6 281 aa3.89□□□□□ -1.79
SCN1A-210ENST00000635776 HPRT1P00492 218 aa3.89□□□□□ -1.79
SCN1A-210ENST00000635776 THBS3P49746 956 aa3.89□□□□□ -1.79
SCN1A-210ENST00000635776 FABP6P51161 128 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms