RNA–Protein interactions for RNA: ENST00000627620.2

SCN8A-209, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-209ENST00000627620 OR8I2Q8N0Y5 310 aa11.17□□□□□ -0.62
SCN8A-209ENST00000627620 OR2T10Q8NGZ9 312 aa11.17□□□□□ -0.62
SCN8A-209ENST00000627620 PGLYRP3Q96LB9 341 aa11.17□□□□□ -0.62
SCN8A-209ENST00000627620 PPIAL4EA0A075B759 164 aa11.17□□□□□ -0.62
SCN8A-209ENST00000627620 A0A1B0GU03 582 aa11.17□□□□□ -0.62
SCN8A-209ENST00000627620 PPIAL4DF5H284 164 aa11.17□□□□□ -0.62
SCN8A-209ENST00000627620 CDS2O95674 445 aa11.17□□□□□ -0.62
SCN8A-209ENST00000627620 ASAH2BP0C7U1 165 aa11.17□□□□□ -0.62
SCN8A-209ENST00000627620 PPIAL4FP0DN26 164 aa11.17□□□□□ -0.62
SCN8A-209ENST00000627620 NANOS3P60323 173 aaKnown RBP11.17□□□□□ -0.62
SCN8A-209ENST00000627620 GGTLC2Q14390 218 aa11.17□□□□□ -0.62
SCN8A-209ENST00000627620 TUSC1Q2TAM9 212 aa11.17□□□□□ -0.62
SCN8A-209ENST00000627620 DGAT2L7PQ6IED9 249 aa11.17□□□□□ -0.62
SCN8A-209ENST00000627620 HSD17B13Q7Z5P4 300 aaPredicted RBP11.17□□□□□ -0.62
SCN8A-209ENST00000627620 PPIAL4AQ9Y536 164 aa11.17□□□□□ -0.62
SCN8A-209ENST00000627620 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.17□□□□□ -0.62
SCN8A-209ENST00000627620 IGHV1-45A0A0A0MS14 117 aa11.17□□□□□ -0.62
SCN8A-209ENST00000627620 C1QCP02747 245 aa11.17□□□□□ -0.62
SCN8A-209ENST00000627620 PPP1CCP36873 323 aaKnown RBP11.17□□□□□ -0.62
SCN8A-209ENST00000627620 KIR3DL2P43630 455 aa11.17□□□□□ -0.62
SCN8A-209ENST00000627620 TMEM50BP56557 158 aa11.17□□□□□ -0.62
SCN8A-209ENST00000627620 HOGA1Q86XE5 327 aa11.17□□□□□ -0.62
SCN8A-209ENST00000627620 COLQQ9Y215 455 aaPredicted RBP11.17□□□□□ -0.62
SCN8A-209ENST00000627620 WIPI2Q9Y4P8 454 aa11.17□□□□□ -0.62
SCN8A-209ENST00000627620 ZNF831Q5JPB2 1677 aa11.16□□□□□ -0.62
SCN8A-209ENST00000627620 DXOO77932 396 aaKnown RBP11.16□□□□□ -0.62
SCN8A-209ENST00000627620 NGFRP08138 427 aa11.16□□□□□ -0.62
SCN8A-209ENST00000627620 RBM11P57052 281 aaKnown RBP11.16□□□□□ -0.62
SCN8A-209ENST00000627620 GABRA6Q16445 453 aa11.16□□□□□ -0.62
SCN8A-209ENST00000627620 TCTEX1D1Q8N7M0 179 aa11.16□□□□□ -0.62
SCN8A-209ENST00000627620 OR11H7Q8NGC8 314 aa11.16□□□□□ -0.62
SCN8A-209ENST00000627620 MRPS18AQ9NVS2 196 aaKnown RBP11.16□□□□□ -0.62
SCN8A-209ENST00000627620 PRSS50Q9UI38 385 aa11.16□□□□□ -0.62
SCN8A-209ENST00000627620 MRPS18BQ9Y676 258 aaKnown RBP11.16□□□□□ -0.62
SCN8A-209ENST00000627620 MCM3APO60318 1980 aa11.16□□□□□ -0.62
SCN8A-209ENST00000627620 PLA2G10O15496 165 aa11.16□□□□□ -0.62
SCN8A-209ENST00000627620 P01737 135 aa11.16□□□□□ -0.62
SCN8A-209ENST00000627620 REG1BP48304 166 aa11.16□□□□□ -0.62
SCN8A-209ENST00000627620 RPL31P62899 125 aaKnown RBP11.16□□□□□ -0.62
SCN8A-209ENST00000627620 PSG4Q00888 419 aa11.16□□□□□ -0.62
SCN8A-209ENST00000627620 MMDQ15546 238 aa11.16□□□□□ -0.62
SCN8A-209ENST00000627620 AWAT1Q58HT5 328 aa11.16□□□□□ -0.62
SCN8A-209ENST00000627620 STPG1Q5TH74 334 aa11.16□□□□□ -0.62
SCN8A-209ENST00000627620 OR1K1Q8NGR3 316 aa11.16□□□□□ -0.62
SCN8A-209ENST00000627620 IL22RA2Q969J5 263 aa11.16□□□□□ -0.62
SCN8A-209ENST00000627620 ANAPC16Q96DE5 110 aa11.16□□□□□ -0.62
SCN8A-209ENST00000627620 PRSS27Q9BQR3 290 aa11.16□□□□□ -0.62
SCN8A-209ENST00000627620 RCC2Q9P258 522 aaKnown RBP11.16□□□□□ -0.62
SCN8A-209ENST00000627620 ORM1P02763 201 aa11.16□□□□□ -0.62
SCN8A-209ENST00000627620 FAM157CP0CG43 387 aa11.16□□□□□ -0.62
SCN8A-209ENST00000627620 HTN1P15515 57 aa11.16□□□□□ -0.62
SCN8A-209ENST00000627620 PRDX2P32119 198 aa11.16□□□□□ -0.62
SCN8A-209ENST00000627620 OR1L8Q8NGR8 309 aa11.16□□□□□ -0.62
SCN8A-209ENST00000627620 LPAR5Q9H1C0 372 aa11.16□□□□□ -0.62
SCN8A-209ENST00000627620 VSIG4Q9Y279 399 aa11.16□□□□□ -0.62
SCN8A-209ENST00000627620 ZFP36L2P47974 494 aaKnown RBP11.16□□□□□ -0.62
SCN8A-209ENST00000627620 TMEM183BQ1AE95 376 aa11.16□□□□□ -0.62
SCN8A-209ENST00000627620 ADAMTS17Q8TE56 1095 aa11.16□□□□□ -0.62
SCN8A-209ENST00000627620 TMEM171Q8WVE6 324 aa11.16□□□□□ -0.62
SCN8A-209ENST00000627620 PERPQ96FX8 193 aa11.16□□□□□ -0.62
SCN8A-209ENST00000627620 NPAS1Q99742 590 aa11.16□□□□□ -0.62
SCN8A-209ENST00000627620 VAX2Q9UIW0 290 aa11.16□□□□□ -0.62
SCN8A-209ENST00000627620 PILRAQ9UKJ1 303 aa11.16□□□□□ -0.62
SCN8A-209ENST00000627620 TRIP11Q15643 1979 aa11.16□□□□□ -0.62
SCN8A-209ENST00000627620 ARG1P05089 322 aa11.16□□□□□ -0.62
SCN8A-209ENST00000627620 NPY1RP25929 384 aa11.16□□□□□ -0.62
SCN8A-209ENST00000627620 B2MP61769 119 aa11.16□□□□□ -0.62
SCN8A-209ENST00000627620 CCL8P80075 99 aa11.16□□□□□ -0.62
SCN8A-209ENST00000627620 ECSCRQ19T08 205 aa11.16□□□□□ -0.62
SCN8A-209ENST00000627620 SLC35E3Q7Z769 313 aa11.16□□□□□ -0.62
SCN8A-209ENST00000627620 NFAM1Q8NET5 270 aaPredicted RBP11.16□□□□□ -0.62
SCN8A-209ENST00000627620 ZNF596Q8TC21 504 aa11.16□□□□□ -0.62
SCN8A-209ENST00000627620 G0S2P27469 103 aa11.15□□□□□ -0.62
SCN8A-209ENST00000627620 COL8A1P27658 744 aa11.15□□□□□ -0.62
SCN8A-209ENST00000627620 UCNP55089 124 aa11.15□□□□□ -0.62
SCN8A-209ENST00000627620 OR4D10Q8NGI6 311 aa11.15□□□□□ -0.62
SCN8A-209ENST00000627620 PCGF1Q9BSM1 259 aa11.15□□□□□ -0.62
SCN8A-209ENST00000627620 OPN3Q9H1Y3 402 aaPredicted RBP11.15□□□□□ -0.62
SCN8A-209ENST00000627620 ATG2BQ96BY7 2078 aa11.15□□□□□ -0.62
SCN8A-209ENST00000627620 TRAV34A0A0B4J273 112 aa11.15□□□□□ -0.62
SCN8A-209ENST00000627620 IGSF23A1L1A6 192 aa11.15□□□□□ -0.62
SCN8A-209ENST00000627620 CLDN14O95500 239 aa11.15□□□□□ -0.62
SCN8A-209ENST00000627620 IGF2P01344 180 aa11.15□□□□□ -0.62
SCN8A-209ENST00000627620 PRSS1P07477 247 aa11.15□□□□□ -0.62
SCN8A-209ENST00000627620 TEX30Q5JUR7 227 aa11.15□□□□□ -0.62
SCN8A-209ENST00000627620 DOLPP1Q86YN1 238 aa11.15□□□□□ -0.62
SCN8A-209ENST00000627620 TMEM251Q8N6I4 163 aa11.15□□□□□ -0.62
SCN8A-209ENST00000627620 OR10C1Q96KK4 312 aa11.15□□□□□ -0.62
SCN8A-209ENST00000627620 LYRM2Q9NU23 88 aaPredicted RBP11.15□□□□□ -0.62
SCN8A-209ENST00000627620 KLK13Q9UKR3 277 aa11.15□□□□□ -0.62
SCN8A-209ENST00000627620 PAGE4O60829 102 aa11.15□□□□□ -0.62
SCN8A-209ENST00000627620 RBPMS2Q6ZRY4 209 aaKnown RBP11.15□□□□□ -0.62
SCN8A-209ENST00000627620 TMEM116Q8NCL8 245 aa11.15□□□□□ -0.62
SCN8A-209ENST00000627620 LINC00052Q96N35 136 aa11.15□□□□□ -0.62
SCN8A-209ENST00000627620 J3QR06 171 aa11.15□□□□□ -0.63
SCN8A-209ENST00000627620 SFTPCP11686 197 aa11.15□□□□□ -0.63
SCN8A-209ENST00000627620 FDX2Q6P4F2 183 aa11.15□□□□□ -0.63
SCN8A-209ENST00000627620 RFLNBQ8N5W9 214 aa11.15□□□□□ -0.63
SCN8A-209ENST00000627620 FGF11Q92914 225 aa11.15□□□□□ -0.63
SCN8A-209ENST00000627620 SIRT4Q9Y6E7 314 aaPredicted RBP11.15□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms