RNA–Protein interactions for RNA: ENST00000623007.3

LDB3-208, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-208ENST00000623007 CYYR1Q96J86 154 aa13.79□□□□□ -0.2
LDB3-208ENST00000623007 MEGF10Q96KG7 1140 aa13.79□□□□□ -0.2
LDB3-208ENST00000623007 C18orf12Q96KH6 178 aa13.79□□□□□ -0.2
LDB3-208ENST00000623007 LURAP1Q96LR2 239 aa13.79□□□□□ -0.2
LDB3-208ENST00000623007 TMEM56Q96MV1 263 aa13.79□□□□□ -0.2
LDB3-208ENST00000623007 TOLLIPQ9H0E2 274 aa13.79□□□□□ -0.2
LDB3-208ENST00000623007 TMEM222Q9H0R3 208 aa13.79□□□□□ -0.2
LDB3-208ENST00000623007 MBD2Q9UBB5 411 aa13.79□□□□□ -0.2
LDB3-208ENST00000623007 OR14J1Q9UGF5 321 aa13.79□□□□□ -0.2
LDB3-208ENST00000623007 TMEM56-RWDD3S4R434 201 aa13.79□□□□□ -0.2
LDB3-208ENST00000623007 RNF212BA8MTL3 300 aa13.79□□□□□ -0.2
LDB3-208ENST00000623007 ATP6V1G2-DDX39BF2Z307 99 aa13.79□□□□□ -0.2
LDB3-208ENST00000623007 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.79□□□□□ -0.2
LDB3-208ENST00000623007 TAAR5O14804 337 aa13.79□□□□□ -0.2
LDB3-208ENST00000623007 PHF1O43189 567 aaPredicted RBP13.79□□□□□ -0.2
LDB3-208ENST00000623007 HSPA12AO43301 675 aa13.79□□□□□ -0.2
LDB3-208ENST00000623007 ADAP1O75689 374 aa13.79□□□□□ -0.2
LDB3-208ENST00000623007 PRAMEF6Q5VXH4 476 aa13.79□□□□□ -0.2
LDB3-208ENST00000623007 OR11L1Q8NGX0 322 aa13.79□□□□□ -0.2
LDB3-208ENST00000623007 SECTM1Q8WVN6 248 aa13.79□□□□□ -0.2
LDB3-208ENST00000623007 DCUN1D4Q92564 292 aa13.79□□□□□ -0.2
LDB3-208ENST00000623007 GALMQ96C23 342 aa13.79□□□□□ -0.2
LDB3-208ENST00000623007 MSI2Q96DH6 328 aaKnown RBP13.79□□□□□ -0.2
LDB3-208ENST00000623007 ARPC5LQ9BPX5 153 aa13.79□□□□□ -0.2
LDB3-208ENST00000623007 DNTTIP1Q9H147 329 aa13.79□□□□□ -0.2
LDB3-208ENST00000623007 FZR1Q9UM11 496 aa13.79□□□□□ -0.2
LDB3-208ENST00000623007 UBE2J1Q9Y385 318 aaPredicted RBP13.79□□□□□ -0.2
LDB3-208ENST00000623007 LINC00862A6NCI5 91 aa13.78□□□□□ -0.2
LDB3-208ENST00000623007 H0Y980 276 aa13.78□□□□□ -0.2
LDB3-208ENST00000623007 TNFRSF1AP19438 455 aa13.78□□□□□ -0.2
LDB3-208ENST00000623007 CCKARP32238 428 aa13.78□□□□□ -0.2
LDB3-208ENST00000623007 CA7P43166 264 aa13.78□□□□□ -0.2
LDB3-208ENST00000623007 FBXL19-AS1Q494R0 122 aa13.78□□□□□ -0.2
LDB3-208ENST00000623007 GGNBP1Q5YKI7 109 aa13.78□□□□□ -0.2
LDB3-208ENST00000623007 SLC7A5P1Q8MH63 180 aa13.78□□□□□ -0.2
LDB3-208ENST00000623007 OR10V1Q8NGI7 309 aa13.78□□□□□ -0.2
LDB3-208ENST00000623007 PLPPR1Q8TBJ4 325 aa13.78□□□□□ -0.2
LDB3-208ENST00000623007 LRRC20Q8TCA0 184 aa13.78□□□□□ -0.2
LDB3-208ENST00000623007 Q8TCH9 128 aa13.78□□□□□ -0.2
LDB3-208ENST00000623007 GLYATL2Q8WU03 294 aa13.78□□□□□ -0.2
LDB3-208ENST00000623007 AQP10Q96PS8 301 aa13.78□□□□□ -0.2
LDB3-208ENST00000623007 OR2V2Q96R30 315 aa13.78□□□□□ -0.2
LDB3-208ENST00000623007 ESRP2Q9H6T0 727 aaKnown RBP13.78□□□□□ -0.2
LDB3-208ENST00000623007 HEXAP06865 529 aa13.77□□□□□ -0.21
LDB3-208ENST00000623007 RCC1P18754 421 aaPredicted RBP13.77□□□□□ -0.21
LDB3-208ENST00000623007 C20orf204Q6ZNR8 217 aa13.77□□□□□ -0.21
LDB3-208ENST00000623007 TBC1D26Q86UD7 250 aa13.77□□□□□ -0.21
LDB3-208ENST00000623007 ZNF695Q8IW36 515 aa13.77□□□□□ -0.21
LDB3-208ENST00000623007 OR5D13Q8NGL4 314 aa13.77□□□□□ -0.21
LDB3-208ENST00000623007 NINJ1Q92982 152 aa13.77□□□□□ -0.21
LDB3-208ENST00000623007 OR10C1Q96KK4 312 aa13.77□□□□□ -0.21
LDB3-208ENST00000623007 SNX22Q96L94 193 aa13.77□□□□□ -0.21
LDB3-208ENST00000623007 CNTNAP3BQ96NU0 1288 aa13.77□□□□□ -0.21
LDB3-208ENST00000623007 CNTNAP3Q9BZ76 1288 aa13.77□□□□□ -0.21
LDB3-208ENST00000623007 PLEKHA2Q9HB19 425 aa13.77□□□□□ -0.21
LDB3-208ENST00000623007 UFSP2Q9NUQ7 469 aa13.77□□□□□ -0.21
LDB3-208ENST00000623007 IGKV1-6A0A0C4DH72 117 aa13.76□□□□□ -0.21
LDB3-208ENST00000623007 RNF222A6NCQ9 220 aa13.76□□□□□ -0.21
LDB3-208ENST00000623007 ZSCAN5BA6NJL1 495 aa13.76□□□□□ -0.21
LDB3-208ENST00000623007 CD55P08174 381 aa13.76□□□□□ -0.21
LDB3-208ENST00000623007 IRF2P14316 349 aa13.76□□□□□ -0.21
LDB3-208ENST00000623007 GZMHP20718 246 aa13.76□□□□□ -0.21
LDB3-208ENST00000623007 UCP1P25874 307 aa13.76□□□□□ -0.21
LDB3-208ENST00000623007 PRDX2P32119 198 aa13.76□□□□□ -0.21
LDB3-208ENST00000623007 ATXN7L3Q14CW9 347 aaPredicted RBP13.76□□□□□ -0.21
LDB3-208ENST00000623007 TESK1Q15569 626 aa13.76□□□□□ -0.21
LDB3-208ENST00000623007 ALKBH2Q6NS38 261 aa13.76□□□□□ -0.21
LDB3-208ENST00000623007 ZNF826PQ6ZT77 177 aa13.76□□□□□ -0.21
LDB3-208ENST00000623007 TCTEX1D1Q8N7M0 179 aa13.76□□□□□ -0.21
LDB3-208ENST00000623007 TAF9BQ9HBM6 251 aa13.76□□□□□ -0.21
LDB3-208ENST00000623007 COQ3Q9NZJ6 369 aa13.76□□□□□ -0.21
LDB3-208ENST00000623007 GSKIPQ9P0R6 139 aa13.76□□□□□ -0.21
LDB3-208ENST00000623007 HEATR1Q9H583 2144 aaKnown RBP13.76□□□□□ -0.21
LDB3-208ENST00000623007 TRGV8A0A0C4DH27 118 aa13.75□□□□□ -0.21
LDB3-208ENST00000623007 MGST3O14880 152 aa13.75□□□□□ -0.21
LDB3-208ENST00000623007 LHBP01229 141 aa13.75□□□□□ -0.21
LDB3-208ENST00000623007 VDAC1P21796 283 aa13.75□□□□□ -0.21
LDB3-208ENST00000623007 IL2RGP31785 369 aa13.75□□□□□ -0.21
LDB3-208ENST00000623007 TNFAIP6P98066 277 aaPredicted RBP13.75□□□□□ -0.21
LDB3-208ENST00000623007 FAM209AQ5JX71 171 aa13.75□□□□□ -0.21
LDB3-208ENST00000623007 EIF5AL1Q6IS14 154 aaKnown RBP13.75□□□□□ -0.21
LDB3-208ENST00000623007 ZNF818PQ6ZRF7 136 aa13.75□□□□□ -0.21
LDB3-208ENST00000623007 WFDC8Q8IUA0 241 aa13.75□□□□□ -0.21
LDB3-208ENST00000623007 STOML3Q8TAV4 291 aa13.75□□□□□ -0.21
LDB3-208ENST00000623007 IL1F10Q8WWZ1 152 aa13.75□□□□□ -0.21
LDB3-208ENST00000623007 MRPL37Q9BZE1 423 aaKnown RBP13.75□□□□□ -0.21
LDB3-208ENST00000623007 SLC25A32Q9H2D1 315 aa13.75□□□□□ -0.21
LDB3-208ENST00000623007 LIN7CQ9NUP9 197 aaKnown RBP13.75□□□□□ -0.21
LDB3-208ENST00000623007 MED9Q9NWA0 146 aa13.75□□□□□ -0.21
LDB3-208ENST00000623007 RNF7Q9UBF6 113 aa13.75□□□□□ -0.21
LDB3-208ENST00000623007 SVILO95425 2214 aa13.75□□□□□ -0.21
LDB3-208ENST00000623007 APC2O95996 2303 aa13.75□□□□□ -0.21
LDB3-208ENST00000623007 LRRC30A6NM36 301 aa13.75□□□□□ -0.21
LDB3-208ENST00000623007 E5RGE8 158 aa13.75□□□□□ -0.21
LDB3-208ENST00000623007 SPINT2O43291 252 aa13.75□□□□□ -0.21
LDB3-208ENST00000623007 PSPNO60542 156 aa13.75□□□□□ -0.21
LDB3-208ENST00000623007 DEDDO75618 318 aa13.75□□□□□ -0.21
LDB3-208ENST00000623007 SLC25A6P12236 298 aa13.75□□□□□ -0.21
LDB3-208ENST00000623007 F2RP25116 425 aa13.75□□□□□ -0.21
LDB3-208ENST00000623007 CHRNB4P30926 498 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms