RNA–Protein interactions for RNA: ENST00000622020.4

NPHP4-211, Transcript of nephrocystin 4, humanhuman

TSL 5 BASIC

Gene NPHP4, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-211ENST00000622020 SYNGR1O43759 233 aa13.51□□□□□ -0.25
NPHP4-211ENST00000622020 PGA5P0DJD9 388 aa13.51□□□□□ -0.25
NPHP4-211ENST00000622020 PSG2P11465 335 aa13.51□□□□□ -0.25
NPHP4-211ENST00000622020 BEND4Q6ZU67 534 aa13.51□□□□□ -0.25
NPHP4-211ENST00000622020 SSX9Q7RTT3 188 aa13.51□□□□□ -0.25
NPHP4-211ENST00000622020 WDR5BQ86VZ2 330 aa13.51□□□□□ -0.25
NPHP4-211ENST00000622020 SPIN2AQ99865 258 aa13.51□□□□□ -0.25
NPHP4-211ENST00000622020 SPIN2BQ9BPZ2 258 aa13.51□□□□□ -0.25
NPHP4-211ENST00000622020 FGF23Q9GZV9 251 aaPredicted RBP13.51□□□□□ -0.25
NPHP4-211ENST00000622020 UNKLQ9H9P5 680 aaKnown RBP13.51□□□□□ -0.25
NPHP4-211ENST00000622020 TAAR3PQ9P1P4 343 aa13.51□□□□□ -0.25
NPHP4-211ENST00000622020 RPL36A-HNRNPH2H7BZ11 118 aa13.5□□□□□ -0.25
NPHP4-211ENST00000622020 CST2P09228 141 aa13.5□□□□□ -0.25
NPHP4-211ENST00000622020 COX6A1P12074 109 aa13.5□□□□□ -0.25
NPHP4-211ENST00000622020 NDUFB7P17568 137 aa13.5□□□□□ -0.25
NPHP4-211ENST00000622020 VDAC1P21796 283 aa13.5□□□□□ -0.25
NPHP4-211ENST00000622020 PAX9P55771 341 aa13.5□□□□□ -0.25
NPHP4-211ENST00000622020 RAC3P60763 192 aa13.5□□□□□ -0.25
NPHP4-211ENST00000622020 HLA-DRB3P79483 266 aa13.5□□□□□ -0.25
NPHP4-211ENST00000622020 TLE4Q04727 773 aa13.5□□□□□ -0.25
NPHP4-211ENST00000622020 Q3ZCU0 254 aa13.5□□□□□ -0.25
NPHP4-211ENST00000622020 WDR25Q64LD2 544 aaPredicted RBP13.5□□□□□ -0.25
NPHP4-211ENST00000622020 TMEM42Q69YG0 159 aa13.5□□□□□ -0.25
NPHP4-211ENST00000622020 Q6ZRM9 215 aa13.5□□□□□ -0.25
NPHP4-211ENST00000622020 SSX7Q7RTT5 188 aa13.5□□□□□ -0.25
NPHP4-211ENST00000622020 CCDC54Q8NEL0 328 aa13.5□□□□□ -0.25
NPHP4-211ENST00000622020 ERRFI1Q9UJM3 462 aaPredicted RBP13.5□□□□□ -0.25
NPHP4-211ENST00000622020 CEP192Q8TEP8 1941 aa13.5□□□□□ -0.25
NPHP4-211ENST00000622020 ST8SIA5O15466 376 aa13.5□□□□□ -0.25
NPHP4-211ENST00000622020 CBR3O75828 277 aa13.5□□□□□ -0.25
NPHP4-211ENST00000622020 FKBP2P26885 142 aaKnown RBP13.5□□□□□ -0.25
NPHP4-211ENST00000622020 PRDX4Q13162 271 aa13.5□□□□□ -0.25
NPHP4-211ENST00000622020 EIF3IQ13347 325 aaKnown RBP13.5□□□□□ -0.25
NPHP4-211ENST00000622020 ASCL4Q6XD76 172 aa13.5□□□□□ -0.25
NPHP4-211ENST00000622020 C1QL4Q86Z23 238 aa13.5□□□□□ -0.25
NPHP4-211ENST00000622020 PLPPR1Q8TBJ4 325 aa13.5□□□□□ -0.25
NPHP4-211ENST00000622020 FAM210BQ96KR6 192 aa13.5□□□□□ -0.25
NPHP4-211ENST00000622020 TMEM56Q96MV1 263 aa13.5□□□□□ -0.25
NPHP4-211ENST00000622020 Q9N2K0 584 aa13.5□□□□□ -0.25
NPHP4-211ENST00000622020 MTCH1Q9NZJ7 389 aa13.5□□□□□ -0.25
NPHP4-211ENST00000622020 LRFN1Q9P244 771 aa13.5□□□□□ -0.25
NPHP4-211ENST00000622020 RBM7Q9Y580 266 aaKnown RBP13.5□□□□□ -0.25
NPHP4-211ENST00000622020 TMEM56-RWDD3S4R434 201 aa13.5□□□□□ -0.25
NPHP4-211ENST00000622020 A0A087WZY1 265 aa13.5□□□□□ -0.25
NPHP4-211ENST00000622020 LY6G6EA0A0G2JKS1 128 aa13.5□□□□□ -0.25
NPHP4-211ENST00000622020 ZNF732B4DXR9 585 aa13.5□□□□□ -0.25
NPHP4-211ENST00000622020 NGFP01138 241 aa13.5□□□□□ -0.25
NPHP4-211ENST00000622020 CD55P08174 381 aa13.5□□□□□ -0.25
NPHP4-211ENST00000622020 ID3Q02535 119 aa13.5□□□□□ -0.25
NPHP4-211ENST00000622020 NMSQ5H8A3 153 aa13.5□□□□□ -0.25
NPHP4-211ENST00000622020 FIP1L1Q6UN15 594 aaKnown RBP13.5□□□□□ -0.25
NPHP4-211ENST00000622020 Q6ZSR3 168 aa13.5□□□□□ -0.25
NPHP4-211ENST00000622020 SGCZQ96LD1 299 aa13.5□□□□□ -0.25
NPHP4-211ENST00000622020 IER2Q9BTL4 223 aa13.5□□□□□ -0.25
NPHP4-211ENST00000622020 PPP1R3CQ9UQK1 317 aa13.5□□□□□ -0.25
NPHP4-211ENST00000622020 U3KQA8 63 aa13.5□□□□□ -0.25
NPHP4-211ENST00000622020 SERPINE2P07093 398 aa13.49□□□□□ -0.25
NPHP4-211ENST00000622020 OTX2P32243 289 aa13.49□□□□□ -0.25
NPHP4-211ENST00000622020 STX12Q86Y82 276 aa13.49□□□□□ -0.25
NPHP4-211ENST00000622020 GPR146Q96CH1 333 aa13.49□□□□□ -0.25
NPHP4-211ENST00000622020 SMOC1Q9H4F8 434 aa13.49□□□□□ -0.25
NPHP4-211ENST00000622020 UFSP2Q9NUQ7 469 aa13.49□□□□□ -0.25
NPHP4-211ENST00000622020 ZFHX4Q86UP3 3567 aa13.49□□□□□ -0.25
NPHP4-211ENST00000622020 ZNF716A6NP11 495 aa13.49□□□□□ -0.25
NPHP4-211ENST00000622020 CEBPZOSA8MTT3 80 aa13.49□□□□□ -0.25
NPHP4-211ENST00000622020 PGLYRP1O75594 196 aaPredicted RBP13.49□□□□□ -0.25
NPHP4-211ENST00000622020 GLIPR1P48060 266 aa13.49□□□□□ -0.25
NPHP4-211ENST00000622020 SSTP61278 116 aa13.49□□□□□ -0.25
NPHP4-211ENST00000622020 GNPNAT1Q96EK6 184 aaPredicted RBP13.49□□□□□ -0.25
NPHP4-211ENST00000622020 IMMP1LQ96LU5 166 aa13.49□□□□□ -0.25
NPHP4-211ENST00000622020 ATP5SQ99766 215 aa13.49□□□□□ -0.25
NPHP4-211ENST00000622020 PLK3Q9H4B4 646 aa13.49□□□□□ -0.25
NPHP4-211ENST00000622020 GPR35Q9HC97 309 aa13.49□□□□□ -0.25
NPHP4-211ENST00000622020 ADAMTS20P59510 1910 aa13.49□□□□□ -0.25
NPHP4-211ENST00000622020 KNTC1P50748 2209 aa13.48□□□□□ -0.25
NPHP4-211ENST00000622020 TRIOBPQ9H2D6 2365 aa13.48□□□□□ -0.25
NPHP4-211ENST00000622020 KLF7O75840 302 aaPredicted RBP13.48□□□□□ -0.25
NPHP4-211ENST00000622020 IFNA5P01569 189 aa13.48□□□□□ -0.25
NPHP4-211ENST00000622020 CLDN15P56746 228 aa13.48□□□□□ -0.25
NPHP4-211ENST00000622020 ARL16Q0P5N6 197 aa13.48□□□□□ -0.25
NPHP4-211ENST00000622020 EXT1Q16394 746 aa13.48□□□□□ -0.25
NPHP4-211ENST00000622020 ZNF506Q5JVG8 444 aa13.48□□□□□ -0.25
NPHP4-211ENST00000622020 ZNF787Q6DD87 383 aa13.48□□□□□ -0.25
NPHP4-211ENST00000622020 DNASE2BQ8WZ79 361 aa13.48□□□□□ -0.25
NPHP4-211ENST00000622020 GTF3AQ92664 365 aaKnown RBP13.48□□□□□ -0.25
NPHP4-211ENST00000622020 ZNF552Q9H707 407 aaPredicted RBP13.48□□□□□ -0.25
NPHP4-211ENST00000622020 LILRA1O75019 489 aa13.48□□□□□ -0.25
NPHP4-211ENST00000622020 HSPB1P04792 205 aaKnown RBP13.48□□□□□ -0.25
NPHP4-211ENST00000622020 SRPXP78539 464 aa13.48□□□□□ -0.25
NPHP4-211ENST00000622020 GGNQ86UU5 652 aa13.48□□□□□ -0.25
NPHP4-211ENST00000622020 OR5T1Q8NG75 326 aa13.48□□□□□ -0.25
NPHP4-211ENST00000622020 CPT1CQ8TCG5 803 aa13.48□□□□□ -0.25
NPHP4-211ENST00000622020 PRRG4Q9BZD6 226 aa13.48□□□□□ -0.25
NPHP4-211ENST00000622020 PRDM13Q9H4Q3 707 aa13.48□□□□□ -0.25
NPHP4-211ENST00000622020 OR1A1Q9P1Q5 309 aa13.48□□□□□ -0.25
NPHP4-211ENST00000622020 CACNG5Q9UF02 275 aa13.48□□□□□ -0.25
NPHP4-211ENST00000622020 P04436 131 aa13.48□□□□□ -0.25
NPHP4-211ENST00000622020 TAS2R30P59541 319 aa13.48□□□□□ -0.25
NPHP4-211ENST00000622020 DSPP15924 2871 aaKnown RBP13.47□□□□□ -0.25
NPHP4-211ENST00000622020 A0A1B0GW64 132 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms