RNA–Protein interactions for RNA: ENST00000619300.4

PSPC1-206, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PSPC1, Length 2,013 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-206ENST00000619300 RAB32Q13637 225 aa16.04■□□□□ 0.16
PSPC1-206ENST00000619300 SMIM21Q3B7S5 101 aa16.04■□□□□ 0.16
PSPC1-206ENST00000619300 BEX5Q5H9J7 111 aa16.04■□□□□ 0.16
PSPC1-206ENST00000619300 ZGRF1Q86YA3 2104 aa16.04■□□□□ 0.16
PSPC1-206ENST00000619300 IFNL4K9M1U5 179 aa16.04■□□□□ 0.16
PSPC1-206ENST00000619300 KCNAB3O43448 404 aa16.04■□□□□ 0.16
PSPC1-206ENST00000619300 BCL2L11O43521 198 aa16.04■□□□□ 0.16
PSPC1-206ENST00000619300 PET100P0DJ07 73 aa16.04■□□□□ 0.16
PSPC1-206ENST00000619300 LYZL2Q7Z4W2 148 aa16.04■□□□□ 0.16
PSPC1-206ENST00000619300 TBC1D26Q86UD7 250 aa16.04■□□□□ 0.16
PSPC1-206ENST00000619300 LRRC29Q8WV35 223 aa16.04■□□□□ 0.16
PSPC1-206ENST00000619300 IL1F10Q8WWZ1 152 aa16.04■□□□□ 0.16
PSPC1-206ENST00000619300 TP53RKQ96S44 253 aa16.04■□□□□ 0.16
PSPC1-206ENST00000619300 CCL28Q9NRJ3 127 aa16.04■□□□□ 0.16
PSPC1-206ENST00000619300 SELENOVP59797 346 aa16.03■□□□□ 0.16
PSPC1-206ENST00000619300 ANGPTL6Q8NI99 470 aa16.03■□□□□ 0.16
PSPC1-206ENST00000619300 SCARB1Q8WTV0 552 aa16.03■□□□□ 0.16
PSPC1-206ENST00000619300 OR5AC2Q9NZP5 309 aa16.03■□□□□ 0.16
PSPC1-206ENST00000619300 FBXO9Q9UK97 447 aaPredicted RBP16.03■□□□□ 0.16
PSPC1-206ENST00000619300 TMEM30CPA0ZSE6 113 aa16.02■□□□□ 0.16
PSPC1-206ENST00000619300 TUBAL3A6NHL2 446 aa16.02■□□□□ 0.16
PSPC1-206ENST00000619300 HSD17B6O14756 317 aa16.02■□□□□ 0.16
PSPC1-206ENST00000619300 CFHR2P36980 270 aa16.02■□□□□ 0.16
PSPC1-206ENST00000619300 SLC35E4Q6ICL7 350 aa16.02■□□□□ 0.16
PSPC1-206ENST00000619300 ALKAL2Q6UX46 152 aa16.02■□□□□ 0.16
PSPC1-206ENST00000619300 TMEM108Q6UXF1 575 aa16.02■□□□□ 0.16
PSPC1-206ENST00000619300 CMTM1Q8IZ96 169 aa16.02■□□□□ 0.16
PSPC1-206ENST00000619300 OR10Z1Q8NGY1 313 aa16.02■□□□□ 0.16
PSPC1-206ENST00000619300 TMEM222Q9H0R3 208 aa16.02■□□□□ 0.16
PSPC1-206ENST00000619300 OR1A1Q9P1Q5 309 aa16.02■□□□□ 0.16
PSPC1-206ENST00000619300 ERRFI1Q9UJM3 462 aaPredicted RBP16.02■□□□□ 0.16
PSPC1-206ENST00000619300 SPDEFO95238 335 aa16.02■□□□□ 0.15
PSPC1-206ENST00000619300 UBA52P62987 128 aaKnown RBP16.02■□□□□ 0.15
PSPC1-206ENST00000619300 SRPXP78539 464 aa16.02■□□□□ 0.15
PSPC1-206ENST00000619300 HMGN3Q15651 99 aa16.02■□□□□ 0.15
PSPC1-206ENST00000619300 PRR18Q8N4B5 295 aa16.02■□□□□ 0.15
PSPC1-206ENST00000619300 PCNPQ8WW12 178 aaKnown RBP16.02■□□□□ 0.15
PSPC1-206ENST00000619300 RND1Q92730 232 aa16.02■□□□□ 0.15
PSPC1-206ENST00000619300 RRNAD1Q96FB5 475 aaKnown RBP16.02■□□□□ 0.15
PSPC1-206ENST00000619300 MEGF10Q96KG7 1140 aa16.02■□□□□ 0.15
PSPC1-206ENST00000619300 CNTNAP3BQ96NU0 1288 aa16.02■□□□□ 0.15
PSPC1-206ENST00000619300 OR2V2Q96R30 315 aa16.02■□□□□ 0.15
PSPC1-206ENST00000619300 CNTNAP3Q9BZ76 1288 aa16.02■□□□□ 0.15
PSPC1-206ENST00000619300 MRPL37Q9BZE1 423 aaKnown RBP16.02■□□□□ 0.15
PSPC1-206ENST00000619300 TAF9BQ9HBM6 251 aa16.02■□□□□ 0.15
PSPC1-206ENST00000619300 CADP27708 2225 aa16.01■□□□□ 0.15
PSPC1-206ENST00000619300 SPRY3O43610 288 aa16.01■□□□□ 0.15
PSPC1-206ENST00000619300 PTAFRP25105 342 aa16.01■□□□□ 0.15
PSPC1-206ENST00000619300 S100A10P60903 97 aa16.01■□□□□ 0.15
PSPC1-206ENST00000619300 SSX8Q7RTT4 187 aa16.01■□□□□ 0.15
PSPC1-206ENST00000619300 NUP37Q8NFH4 326 aa16.01■□□□□ 0.15
PSPC1-206ENST00000619300 LHFPL5Q8TAF8 219 aa16.01■□□□□ 0.15
PSPC1-206ENST00000619300 ST8SIA2Q92186 375 aa16.01■□□□□ 0.15
PSPC1-206ENST00000619300 VKORC1Q9BQB6 163 aa16.01■□□□□ 0.15
PSPC1-206ENST00000619300 UBE2J1Q9Y385 318 aaPredicted RBP16.01■□□□□ 0.15
PSPC1-206ENST00000619300 SRRM5B3KS81 715 aa16.01■□□□□ 0.15
PSPC1-206ENST00000619300 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP16.01■□□□□ 0.15
PSPC1-206ENST00000619300 NUP62P37198 522 aaPredicted RBP16.01■□□□□ 0.15
PSPC1-206ENST00000619300 COL10A1Q03692 680 aa16.01■□□□□ 0.15
PSPC1-206ENST00000619300 WFDC8Q8IUA0 241 aa16.01■□□□□ 0.15
PSPC1-206ENST00000619300 FAM219AQ8IW50 185 aa16.01■□□□□ 0.15
PSPC1-206ENST00000619300 OR1S1Q8NH92 325 aa16.01■□□□□ 0.15
PSPC1-206ENST00000619300 CITED4Q96RK1 184 aa16.01■□□□□ 0.15
PSPC1-206ENST00000619300 ARPC5LQ9BPX5 153 aa16.01■□□□□ 0.15
PSPC1-206ENST00000619300 KCNIP1Q9NZI2 227 aa16.01■□□□□ 0.15
PSPC1-206ENST00000619300 DNAJB11Q9UBS4 358 aa16.01■□□□□ 0.15
PSPC1-206ENST00000619300 TMED3Q9Y3Q3 217 aa16.01■□□□□ 0.15
PSPC1-206ENST00000619300 TFF1P04155 84 aa16■□□□□ 0.15
PSPC1-206ENST00000619300 HEXAP06865 529 aa16■□□□□ 0.15
PSPC1-206ENST00000619300 PRDX2P32119 198 aa16■□□□□ 0.15
PSPC1-206ENST00000619300 OR3A1P47881 315 aa16■□□□□ 0.15
PSPC1-206ENST00000619300 AESQ08117 197 aa16■□□□□ 0.15
PSPC1-206ENST00000619300 SPRNQ5BIV9 151 aa16■□□□□ 0.15
PSPC1-206ENST00000619300 MEX3BQ6ZN04 569 aaKnown RBP16■□□□□ 0.15
PSPC1-206ENST00000619300 FAM90A1Q86YD7 464 aa16■□□□□ 0.15
PSPC1-206ENST00000619300 BVESQ8NE79 360 aa16■□□□□ 0.15
PSPC1-206ENST00000619300 TMEM56Q96MV1 263 aa16■□□□□ 0.15
PSPC1-206ENST00000619300 DMRTA2Q96SC8 542 aa16■□□□□ 0.15
PSPC1-206ENST00000619300 KIF25Q9UIL4 384 aa16■□□□□ 0.15
PSPC1-206ENST00000619300 AUP1Q9Y679 476 aa16■□□□□ 0.15
PSPC1-206ENST00000619300 TMEM56-RWDD3S4R434 201 aa16■□□□□ 0.15
PSPC1-206ENST00000619300 LEUTXA8MZ59 168 aa15.99■□□□□ 0.15
PSPC1-206ENST00000619300 HSPA12AO43301 675 aa15.99■□□□□ 0.15
PSPC1-206ENST00000619300 PGLYRP1O75594 196 aaPredicted RBP15.99■□□□□ 0.15
PSPC1-206ENST00000619300 THBDP07204 575 aa15.99■□□□□ 0.15
PSPC1-206ENST00000619300 EGR1P18146 543 aa15.99■□□□□ 0.15
PSPC1-206ENST00000619300 S100GP29377 79 aa15.99■□□□□ 0.15
PSPC1-206ENST00000619300 TESK1Q15569 626 aa15.99■□□□□ 0.15
PSPC1-206ENST00000619300 TMEM268Q5VZI3 342 aa15.99■□□□□ 0.15
PSPC1-206ENST00000619300 CD177Q8N6Q3 437 aa15.99■□□□□ 0.15
PSPC1-206ENST00000619300 OR10V1Q8NGI7 309 aa15.99■□□□□ 0.15
PSPC1-206ENST00000619300 AQP10Q96PS8 301 aa15.99■□□□□ 0.15
PSPC1-206ENST00000619300 ZNF471Q9BX82 626 aaPredicted RBP15.99■□□□□ 0.15
PSPC1-206ENST00000619300 METRNQ9UJH8 293 aa15.99■□□□□ 0.15
PSPC1-206ENST00000619300 TLN1Q9Y490 2541 aaKnown RBP15.99■□□□□ 0.15
PSPC1-206ENST00000619300 DPRXA6NFQ7 191 aa15.99■□□□□ 0.15
PSPC1-206ENST00000619300 F5H0A9 414 aaPredicted RBP15.99■□□□□ 0.15
PSPC1-206ENST00000619300 RLN2P04090 185 aa15.99■□□□□ 0.15
PSPC1-206ENST00000619300 PSG2P11465 335 aa15.99■□□□□ 0.15
PSPC1-206ENST00000619300 LUMP51884 338 aaPredicted RBP15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms