RNA–Protein interactions for RNA: ENST00000616033.4

MSH6-214, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 3,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-214ENST00000616033 SLC25A26Q70HW3 274 aa11.37□□□□□ -0.59
MSH6-214ENST00000616033 OR6X1Q8NH79 312 aa11.37□□□□□ -0.59
MSH6-214ENST00000616033 C18orf12Q96KH6 178 aa11.37□□□□□ -0.59
MSH6-214ENST00000616033 FGF21Q9NSA1 209 aa11.37□□□□□ -0.59
MSH6-214ENST00000616033 FREM1Q5H8C1 2179 aa11.37□□□□□ -0.59
MSH6-214ENST00000616033 FER1L5A0AVI2 2057 aa11.37□□□□□ -0.59
MSH6-214ENST00000616033 ZNF816-ZNF321PA0A0X1KG74 233 aa11.37□□□□□ -0.59
MSH6-214ENST00000616033 TOX3O15405 576 aaPredicted RBP11.37□□□□□ -0.59
MSH6-214ENST00000616033 ZNF133P52736 654 aaPredicted RBP11.37□□□□□ -0.59
MSH6-214ENST00000616033 PMP22Q01453 160 aa11.37□□□□□ -0.59
MSH6-214ENST00000616033 SSX7Q7RTT5 188 aa11.37□□□□□ -0.59
MSH6-214ENST00000616033 GJC3Q8NFK1 279 aa11.37□□□□□ -0.59
MSH6-214ENST00000616033 OR10A7Q8NGE5 316 aa11.37□□□□□ -0.59
MSH6-214ENST00000616033 TMED3Q9Y3Q3 217 aa11.37□□□□□ -0.59
MSH6-214ENST00000616033 PPP5D1E7EU14 171 aa11.36□□□□□ -0.59
MSH6-214ENST00000616033 CST2P09228 141 aa11.36□□□□□ -0.59
MSH6-214ENST00000616033 IFI6P09912 130 aa11.36□□□□□ -0.59
MSH6-214ENST00000616033 RAB4AP20338 218 aa11.36□□□□□ -0.59
MSH6-214ENST00000616033 GRB2P62993 217 aaKnown RBP11.36□□□□□ -0.59
MSH6-214ENST00000616033 ZNF818PQ6ZRF7 136 aa11.36□□□□□ -0.59
MSH6-214ENST00000616033 ST8SIA1Q92185 356 aa11.36□□□□□ -0.59
MSH6-214ENST00000616033 ALKBH3Q96Q83 286 aaPredicted RBP11.36□□□□□ -0.59
MSH6-214ENST00000616033 IL36RNQ9UBH0 155 aa11.36□□□□□ -0.59
MSH6-214ENST00000616033 RPH3ALQ9UNE2 315 aa11.36□□□□□ -0.59
MSH6-214ENST00000616033 IGKV1-12A0A0C4DH73 117 aa11.36□□□□□ -0.59
MSH6-214ENST00000616033 C2CD4DB7Z1M9 353 aa11.36□□□□□ -0.59
MSH6-214ENST00000616033 IGKV1D-12P01611 117 aa11.36□□□□□ -0.59
MSH6-214ENST00000616033 MSR1P21757 451 aa11.36□□□□□ -0.59
MSH6-214ENST00000616033 LTBRP36941 435 aa11.36□□□□□ -0.59
MSH6-214ENST00000616033 SPANXN5Q5MJ07 72 aa11.36□□□□□ -0.59
MSH6-214ENST00000616033 ZNF100Q8IYN0 542 aa11.36□□□□□ -0.59
MSH6-214ENST00000616033 ULBP2Q9BZM5 246 aa11.36□□□□□ -0.59
MSH6-214ENST00000616033 RBKSQ9H477 322 aa11.36□□□□□ -0.59
MSH6-214ENST00000616033 PITPNC1Q9UKF7 332 aa11.36□□□□□ -0.59
MSH6-214ENST00000616033 DFFBO76075 338 aa11.35□□□□□ -0.59
MSH6-214ENST00000616033 CCL2P13500 99 aa11.35□□□□□ -0.59
MSH6-214ENST00000616033 CEACAM1P13688 526 aa11.35□□□□□ -0.59
MSH6-214ENST00000616033 B4GALT1P15291 398 aa11.35□□□□□ -0.59
MSH6-214ENST00000616033 UCP2P55851 309 aa11.35□□□□□ -0.59
MSH6-214ENST00000616033 RAB30Q15771 203 aa11.35□□□□□ -0.59
MSH6-214ENST00000616033 ZNF468Q5VIY5 522 aaPredicted RBP11.35□□□□□ -0.59
MSH6-214ENST00000616033 OSR2Q8N2R0 312 aa11.35□□□□□ -0.59
MSH6-214ENST00000616033 OR1P1Q8NH06 330 aa11.35□□□□□ -0.59
MSH6-214ENST00000616033 GATAD1Q8WUU5 269 aa11.35□□□□□ -0.59
MSH6-214ENST00000616033 RBMXL1Q96E39 390 aaKnown RBP11.35□□□□□ -0.59
MSH6-214ENST00000616033 OR5B12Q96R08 314 aa11.35□□□□□ -0.59
MSH6-214ENST00000616033 NUDT16L1Q9BRJ7 211 aaKnown RBP11.35□□□□□ -0.59
MSH6-214ENST00000616033 SLC25A22Q9H936 323 aa11.35□□□□□ -0.59
MSH6-214ENST00000616033 WDFY4Q6ZS81 3184 aa11.35□□□□□ -0.59
MSH6-214ENST00000616033 DNAJC13O75165 2243 aa11.35□□□□□ -0.59
MSH6-214ENST00000616033 IGKV3D-11A0A0A0MRZ8 115 aa11.35□□□□□ -0.59
MSH6-214ENST00000616033 BLACEA4D250 179 aa11.35□□□□□ -0.59
MSH6-214ENST00000616033 TRDCB7Z8K6 153 aa11.35□□□□□ -0.59
MSH6-214ENST00000616033 HSPB1P04792 205 aaKnown RBP11.35□□□□□ -0.59
MSH6-214ENST00000616033 D2HGDHQ8N465 521 aa11.35□□□□□ -0.59
MSH6-214ENST00000616033 C22orf15Q8WYQ4 148 aa11.35□□□□□ -0.59
MSH6-214ENST00000616033 IGKV1D-13A0A0B4J2D9 117 aa11.35□□□□□ -0.59
MSH6-214ENST00000616033 H7BYZ3 331 aa11.35□□□□□ -0.59
MSH6-214ENST00000616033 HS3ST1O14792 307 aa11.35□□□□□ -0.59
MSH6-214ENST00000616033 IGKV1-13P0DP09 117 aa11.35□□□□□ -0.59
MSH6-214ENST00000616033 ECI1P42126 302 aa11.35□□□□□ -0.59
MSH6-214ENST00000616033 ZXDAP98168 799 aa11.35□□□□□ -0.59
MSH6-214ENST00000616033 ZP4Q12836 540 aa11.35□□□□□ -0.59
MSH6-214ENST00000616033 IGFBP7Q16270 282 aa11.35□□□□□ -0.59
MSH6-214ENST00000616033 SLC25A47Q6Q0C1 308 aa11.35□□□□□ -0.59
MSH6-214ENST00000616033 OR4D5Q8NGN0 318 aa11.35□□□□□ -0.59
MSH6-214ENST00000616033 LHX4Q969G2 390 aa11.35□□□□□ -0.59
MSH6-214ENST00000616033 USF3Q68DE3 2245 aa11.34□□□□□ -0.59
MSH6-214ENST00000616033 ZNF320A2RRD8 509 aa11.34□□□□□ -0.59
MSH6-214ENST00000616033 NRASP01111 189 aa11.34□□□□□ -0.59
MSH6-214ENST00000616033 ZNF506Q5JVG8 444 aa11.34□□□□□ -0.59
MSH6-214ENST00000616033 FAM90A2PQ658T7 463 aa11.34□□□□□ -0.59
MSH6-214ENST00000616033 TMPRSS7Q7RTY8 843 aa11.34□□□□□ -0.59
MSH6-214ENST00000616033 M0QZ24 198 aa11.34□□□□□ -0.59
MSH6-214ENST00000616033 PITX3O75364 302 aa11.34□□□□□ -0.59
MSH6-214ENST00000616033 IL18BPO95998 194 aa11.34□□□□□ -0.59
MSH6-214ENST00000616033 GALR1P47211 349 aa11.34□□□□□ -0.59
MSH6-214ENST00000616033 GNB2P62879 340 aa11.34□□□□□ -0.59
MSH6-214ENST00000616033 TOMM20LQ6UXN7 152 aa11.34□□□□□ -0.59
MSH6-214ENST00000616033 SLC35E3Q7Z769 313 aa11.34□□□□□ -0.59
MSH6-214ENST00000616033 PP6455Q8WZ26 134 aa11.34□□□□□ -0.59
MSH6-214ENST00000616033 RDH5Q92781 318 aa11.34□□□□□ -0.59
MSH6-214ENST00000616033 RAB24Q969Q5 203 aa11.34□□□□□ -0.59
MSH6-214ENST00000616033 GNPNAT1Q96EK6 184 aaPredicted RBP11.34□□□□□ -0.59
MSH6-214ENST00000616033 CDCA3Q99618 268 aaPredicted RBP11.34□□□□□ -0.59
MSH6-214ENST00000616033 LYRM2Q9NU23 88 aaPredicted RBP11.34□□□□□ -0.59
MSH6-214ENST00000616033 OBP2AQ9NY56 170 aa11.34□□□□□ -0.59
MSH6-214ENST00000616033 TK1P04183 234 aa11.34□□□□□ -0.59
MSH6-214ENST00000616033 SERPINE2P07093 398 aa11.34□□□□□ -0.59
MSH6-214ENST00000616033 CELA2AP08217 269 aa11.34□□□□□ -0.59
MSH6-214ENST00000616033 MRPS11P82912 194 aaKnown RBP11.34□□□□□ -0.59
MSH6-214ENST00000616033 JOSD1Q15040 202 aaPredicted RBP11.34□□□□□ -0.59
MSH6-214ENST00000616033 OR4F5Q8NH21 305 aa11.34□□□□□ -0.59
MSH6-214ENST00000616033 FAM131CQ96AQ9 280 aa11.34□□□□□ -0.59
MSH6-214ENST00000616033 OR4F4Q96R69 305 aa11.34□□□□□ -0.59
MSH6-214ENST00000616033 DKKL1Q9UK85 242 aa11.34□□□□□ -0.59
MSH6-214ENST00000616033 HS3ST3A1Q9Y663 406 aa11.34□□□□□ -0.59
MSH6-214ENST00000616033 A0A0G2JRQ6 117 aa11.33□□□□□ -0.6
MSH6-214ENST00000616033 UBE2L5PA0A1B0GUS4 154 aa11.33□□□□□ -0.6
MSH6-214ENST00000616033 LOC102723971A0A1B0GUV8 181 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms