RNA–Protein interactions for RNA: ENST00000615393.5

VEGFA-227, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 984 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-227ENST00000615393 MND1Q9BWT6 205 aa20.15■□□□□ 0.82
VEGFA-227ENST00000615393 M0QZK8 103 aa20.14■□□□□ 0.81
VEGFA-227ENST00000615393 CDK1P06493 297 aa20.14■□□□□ 0.81
VEGFA-227ENST00000615393 LYG1Q8N1E2 194 aa20.14■□□□□ 0.81
VEGFA-227ENST00000615393 OR10X1Q8NGY0 326 aa20.14■□□□□ 0.81
VEGFA-227ENST00000615393 MCRIP1C9JLW8 97 aa20.13■□□□□ 0.81
VEGFA-227ENST00000615393 RAB7AP51149 207 aa20.13■□□□□ 0.81
VEGFA-227ENST00000615393 ABCA11PQ4W5N1 156 aa20.13■□□□□ 0.81
VEGFA-227ENST00000615393 RNLSQ5VYX0 342 aa20.13■□□□□ 0.81
VEGFA-227ENST00000615393 ZNF497Q6ZNH5 498 aa20.13■□□□□ 0.81
VEGFA-227ENST00000615393 THNSL2Q86YJ6 484 aa20.13■□□□□ 0.81
VEGFA-227ENST00000615393 ARL11Q969Q4 196 aa20.13■□□□□ 0.81
VEGFA-227ENST00000615393 CITED2Q99967 270 aaPredicted RBP20.13■□□□□ 0.81
VEGFA-227ENST00000615393 RCC2Q9P258 522 aaKnown RBP20.13■□□□□ 0.81
VEGFA-227ENST00000615393 AIPO00170 330 aa20.12■□□□□ 0.81
VEGFA-227ENST00000615393 PIN1P1O15428 100 aa20.12■□□□□ 0.81
VEGFA-227ENST00000615393 ORC5O43913 435 aa20.12■□□□□ 0.81
VEGFA-227ENST00000615393 FBLN7Q53RD9 439 aa20.12■□□□□ 0.81
VEGFA-227ENST00000615393 C6orf141Q5SZD1 244 aa20.12■□□□□ 0.81
VEGFA-227ENST00000615393 OR8H3Q8N146 312 aa20.12■□□□□ 0.81
VEGFA-227ENST00000615393 OR52M1Q8NGK5 317 aa20.12■□□□□ 0.81
VEGFA-227ENST00000615393 CCDC107Q8WV48 283 aa20.12■□□□□ 0.81
VEGFA-227ENST00000615393 MYDGFQ969H8 173 aa20.12■□□□□ 0.81
VEGFA-227ENST00000615393 UQCC2Q9BRT2 126 aa20.12■□□□□ 0.81
VEGFA-227ENST00000615393 SCN3BQ9NY72 215 aa20.12■□□□□ 0.81
VEGFA-227ENST00000615393 NKX1-2Q9UD57 310 aaPredicted RBP20.12■□□□□ 0.81
VEGFA-227ENST00000615393 FAM90A18PA6NE21 464 aa20.11■□□□□ 0.81
VEGFA-227ENST00000615393 FAM90A16PA6NEW6 464 aa20.11■□□□□ 0.81
VEGFA-227ENST00000615393 FAM90A20PA6NIJ5 464 aa20.11■□□□□ 0.81
VEGFA-227ENST00000615393 FAM90A9PA6NNJ1 464 aa20.11■□□□□ 0.81
VEGFA-227ENST00000615393 FAM90A12PA8MX19 464 aa20.11■□□□□ 0.81
VEGFA-227ENST00000615393 FAM90A5PA8MXJ8 464 aa20.11■□□□□ 0.81
VEGFA-227ENST00000615393 PTGES3LE9PB15 166 aa20.11■□□□□ 0.81
VEGFA-227ENST00000615393 C15orf65H3BRN8 121 aa20.11■□□□□ 0.81
VEGFA-227ENST00000615393 MT-ND4P03905 459 aa20.11■□□□□ 0.81
VEGFA-227ENST00000615393 LPLP06858 475 aa20.11■□□□□ 0.81
VEGFA-227ENST00000615393 FAM90A15PP0C7V4 464 aa20.11■□□□□ 0.81
VEGFA-227ENST00000615393 FAM90A13PP0C7W8 464 aa20.11■□□□□ 0.81
VEGFA-227ENST00000615393 FAM90A14PP0C7W9 464 aa20.11■□□□□ 0.81
VEGFA-227ENST00000615393 FAM90A24PP0C7X0 464 aa20.11■□□□□ 0.81
VEGFA-227ENST00000615393 CENPVQ7Z7K6 275 aaPredicted RBP20.11■□□□□ 0.81
VEGFA-227ENST00000615393 C1QL4Q86Z23 238 aa20.11■□□□□ 0.81
VEGFA-227ENST00000615393 MS4A15Q8N5U1 240 aa20.11■□□□□ 0.81
VEGFA-227ENST00000615393 OR4F17Q8NGA8 305 aa20.11■□□□□ 0.81
VEGFA-227ENST00000615393 OR5AU1Q8NGC0 362 aa20.11■□□□□ 0.81
VEGFA-227ENST00000615393 OR56B4Q8NH76 319 aa20.11■□□□□ 0.81
VEGFA-227ENST00000615393 OR4F4Q96R69 305 aa20.11■□□□□ 0.81
VEGFA-227ENST00000615393 SELENOIQ9C0D9 397 aa20.11■□□□□ 0.81
VEGFA-227ENST00000615393 RAB9BQ9NP90 201 aa20.11■□□□□ 0.81
VEGFA-227ENST00000615393 ETAA1Q9NY74 926 aa20.11■□□□□ 0.81
VEGFA-227ENST00000615393 MOB4Q9Y3A3 225 aa20.11■□□□□ 0.81
VEGFA-227ENST00000615393 A0A1W2PPI3 338 aa20.1■□□□□ 0.81
VEGFA-227ENST00000615393 FAM90A10PA6NDY2 464 aa20.1■□□□□ 0.81
VEGFA-227ENST00000615393 FAM90A7PA6NKC0 464 aa20.1■□□□□ 0.81
VEGFA-227ENST00000615393 FAM90A23PA8MXZ1 464 aa20.1■□□□□ 0.81
VEGFA-227ENST00000615393 SDCBPO00560 298 aaPredicted RBP20.1■□□□□ 0.81
VEGFA-227ENST00000615393 CRTAPO75718 401 aaPredicted RBP20.1■□□□□ 0.81
VEGFA-227ENST00000615393 SNRNP70P08621 437 aaKnown RBP20.1■□□□□ 0.81
VEGFA-227ENST00000615393 MGMTP16455 207 aa20.1■□□□□ 0.81
VEGFA-227ENST00000615393 GABPB1Q06547 395 aaPredicted RBP20.1■□□□□ 0.81
VEGFA-227ENST00000615393 RAB12Q6IQ22 244 aa20.1■□□□□ 0.81
VEGFA-227ENST00000615393 LYPD6Q86Y78 171 aa20.1■□□□□ 0.81
VEGFA-227ENST00000615393 DRAM1Q8N682 238 aa20.1■□□□□ 0.81
VEGFA-227ENST00000615393 R3HDM4Q96D70 268 aa20.1■□□□□ 0.81
VEGFA-227ENST00000615393 BANF2Q9H503 90 aa20.1■□□□□ 0.81
VEGFA-227ENST00000615393 GHRLQ9UBU3 117 aa20.1■□□□□ 0.81
VEGFA-227ENST00000615393 A0A1W2PPE3 182 aa20.09■□□□□ 0.81
VEGFA-227ENST00000615393 HES1Q14469 280 aa20.09■□□□□ 0.81
VEGFA-227ENST00000615393 ACSM3Q53FZ2 586 aa20.09■□□□□ 0.81
VEGFA-227ENST00000615393 GFOD1Q9NXC2 390 aa20.09■□□□□ 0.81
VEGFA-227ENST00000615393 TRAPPC2LQ9UL33 140 aa20.09■□□□□ 0.81
VEGFA-227ENST00000615393 PEX16Q9Y5Y5 336 aa20.09■□□□□ 0.81
VEGFA-227ENST00000615393 HSD17B6O14756 317 aa20.08■□□□□ 0.81
VEGFA-227ENST00000615393 CA11O75493 328 aa20.08■□□□□ 0.81
VEGFA-227ENST00000615393 AMY1AP04745 511 aa20.08■□□□□ 0.81
VEGFA-227ENST00000615393 AMY2AP04746 511 aa20.08■□□□□ 0.81
VEGFA-227ENST00000615393 TMEM11P17152 192 aa20.08■□□□□ 0.81
VEGFA-227ENST00000615393 AQP4P55087 323 aa20.08■□□□□ 0.81
VEGFA-227ENST00000615393 GPR50Q13585 617 aa20.08■□□□□ 0.81
VEGFA-227ENST00000615393 DIAPH2-AS1Q14236 149 aa20.08■□□□□ 0.81
VEGFA-227ENST00000615393 SPHARQ15513 63 aa20.08■□□□□ 0.81
VEGFA-227ENST00000615393 C9orf152Q5JTZ5 239 aa20.08■□□□□ 0.81
VEGFA-227ENST00000615393 C6orf183Q5T699 404 aa20.08■□□□□ 0.81
VEGFA-227ENST00000615393 SYT6Q5T7P8 510 aaPredicted RBP20.08■□□□□ 0.81
VEGFA-227ENST00000615393 UNQ9370/PRO34162Q6UXP9 181 aa20.08■□□□□ 0.81
VEGFA-227ENST00000615393 LINC00311Q8N616 119 aa20.08■□□□□ 0.81
VEGFA-227ENST00000615393 C8orf31Q8N9H6 132 aa20.08■□□□□ 0.81
VEGFA-227ENST00000615393 Q96M66 194 aa20.08■□□□□ 0.81
VEGFA-227ENST00000615393 TMED9Q9BVK6 235 aa20.08■□□□□ 0.81
VEGFA-227ENST00000615393 SH2D7A6NKC9 451 aaPredicted RBP20.07■□□□□ 0.8
VEGFA-227ENST00000615393 ADARB2-AS1A8MUL3 147 aa20.07■□□□□ 0.8
VEGFA-227ENST00000615393 CCRL2O00421 344 aa20.07■□□□□ 0.8
VEGFA-227ENST00000615393 SPINT2O43291 252 aa20.07■□□□□ 0.8
VEGFA-227ENST00000615393 GAPDHP04406 335 aaKnown RBP20.07■□□□□ 0.8
VEGFA-227ENST00000615393 GLAP06280 429 aa20.07■□□□□ 0.8
VEGFA-227ENST00000615393 IL3RAP26951 378 aa20.07■□□□□ 0.8
VEGFA-227ENST00000615393 CD83Q01151 205 aa20.07■□□□□ 0.8
VEGFA-227ENST00000615393 ZNF816Q0VGE8 651 aaPredicted RBP20.07■□□□□ 0.8
VEGFA-227ENST00000615393 MED22Q15528 200 aa20.07■□□□□ 0.8
VEGFA-227ENST00000615393 TMEM30BQ3MIR4 351 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms