RNA–Protein interactions for RNA: ENST00000613744.4

POLR2J3-220, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J3, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-220ENST00000613744 CABLES2Q9BTV7 478 aa18.9■□□□□ 0.62
POLR2J3-220ENST00000613744 ABHD14AQ9BUJ0 271 aa18.9■□□□□ 0.62
POLR2J3-220ENST00000613744 CNTRLQ7Z7A1 2325 aa18.9■□□□□ 0.62
POLR2J3-220ENST00000613744 M0QZK8 103 aa18.89■□□□□ 0.62
POLR2J3-220ENST00000613744 GGCTO75223 188 aaKnown RBP18.89■□□□□ 0.62
POLR2J3-220ENST00000613744 CCKARP32238 428 aa18.89■□□□□ 0.62
POLR2J3-220ENST00000613744 MTCP1P56278 107 aa18.89■□□□□ 0.62
POLR2J3-220ENST00000613744 SP6Q3SY56 376 aa18.89■□□□□ 0.62
POLR2J3-220ENST00000613744 TMEM234Q8WY98 164 aa18.89■□□□□ 0.62
POLR2J3-220ENST00000613744 P2RX4Q99571 388 aa18.89■□□□□ 0.62
POLR2J3-220ENST00000613744 SOX8P57073 446 aa18.89■□□□□ 0.61
POLR2J3-220ENST00000613744 ZNF121P58317 390 aaPredicted RBP18.89■□□□□ 0.61
POLR2J3-220ENST00000613744 C4orf17Q53FE4 359 aa18.89■□□□□ 0.61
POLR2J3-220ENST00000613744 SDF2L1Q9HCN8 221 aa18.89■□□□□ 0.61
POLR2J3-220ENST00000613744 CHST11Q9NPF2 352 aa18.89■□□□□ 0.61
POLR2J3-220ENST00000613744 LYRM2Q9NU23 88 aaPredicted RBP18.89■□□□□ 0.61
POLR2J3-220ENST00000613744 KLRF1Q9NZS2 232 aa18.89■□□□□ 0.61
POLR2J3-220ENST00000613744 TPRP12270 2363 aaKnown RBP18.89■□□□□ 0.61
POLR2J3-220ENST00000613744 IGSF23A1L1A6 192 aa18.88■□□□□ 0.61
POLR2J3-220ENST00000613744 TMEM8BA6NDV4 472 aa18.88■□□□□ 0.61
POLR2J3-220ENST00000613744 DBHP09172 617 aa18.88■□□□□ 0.61
POLR2J3-220ENST00000613744 TMEM225BP0DP42 221 aa18.88■□□□□ 0.61
POLR2J3-220ENST00000613744 TBR1Q16650 682 aa18.88■□□□□ 0.61
POLR2J3-220ENST00000613744 IQCJQ1A5X6 159 aa18.88■□□□□ 0.61
POLR2J3-220ENST00000613744 THEM4Q5T1C6 240 aa18.88■□□□□ 0.61
POLR2J3-220ENST00000613744 H1FOOQ8IZA3 346 aaPredicted RBP18.88■□□□□ 0.61
POLR2J3-220ENST00000613744 CYYR1Q96J86 154 aa18.88■□□□□ 0.61
POLR2J3-220ENST00000613744 FAM71F1Q96KD3 344 aaPredicted RBP18.88■□□□□ 0.61
POLR2J3-220ENST00000613744 METTL7AQ9H8H3 244 aa18.88■□□□□ 0.61
POLR2J3-220ENST00000613744 SLC2A9Q9NRM0 540 aa18.88■□□□□ 0.61
POLR2J3-220ENST00000613744 PLEKHJ1Q9NW61 149 aa18.88■□□□□ 0.61
POLR2J3-220ENST00000613744 LHFPL6Q9Y693 200 aa18.88■□□□□ 0.61
POLR2J3-220ENST00000613744 FAM24AA6NFZ4 105 aa18.88■□□□□ 0.61
POLR2J3-220ENST00000613744 MBP02144 154 aa18.88■□□□□ 0.61
POLR2J3-220ENST00000613744 SPINK14Q6IE38 97 aa18.88■□□□□ 0.61
POLR2J3-220ENST00000613744 SNHG12Q9BXW3 62 aa18.88■□□□□ 0.61
POLR2J3-220ENST00000613744 ACACBO00763 2458 aa18.87■□□□□ 0.61
POLR2J3-220ENST00000613744 PPP5D1E7EU14 171 aa18.87■□□□□ 0.61
POLR2J3-220ENST00000613744 WISP1O95388 367 aa18.87■□□□□ 0.61
POLR2J3-220ENST00000613744 ERVFC1-1P60608 527 aa18.87■□□□□ 0.61
POLR2J3-220ENST00000613744 POU3F1Q03052 451 aaPredicted RBP18.87■□□□□ 0.61
POLR2J3-220ENST00000613744 PRAMEF20Q5VT98 475 aa18.87■□□□□ 0.61
POLR2J3-220ENST00000613744 CRIP3Q6Q6R5 217 aa18.87■□□□□ 0.61
POLR2J3-220ENST00000613744 CMTM1Q8IZ96 169 aa18.87■□□□□ 0.61
POLR2J3-220ENST00000613744 TMEM252Q8N6L7 170 aa18.87■□□□□ 0.61
POLR2J3-220ENST00000613744 ARL6IP6Q8N6S5 226 aa18.87■□□□□ 0.61
POLR2J3-220ENST00000613744 POM121Q96HA1 1249 aa18.87■□□□□ 0.61
POLR2J3-220ENST00000613744 TNRC6AQ8NDV7 1962 aaKnown RBP18.87■□□□□ 0.61
POLR2J3-220ENST00000613744 G3V3Y1 287 aa18.86■□□□□ 0.61
POLR2J3-220ENST00000613744 EPHA1P21709 976 aa18.86■□□□□ 0.61
POLR2J3-220ENST00000613744 NKX2-1P43699 371 aaPredicted RBP18.86■□□□□ 0.61
POLR2J3-220ENST00000613744 ACSF3Q4G176 576 aaPredicted RBP18.86■□□□□ 0.61
POLR2J3-220ENST00000613744 C1QL2Q7Z5L3 287 aa18.86■□□□□ 0.61
POLR2J3-220ENST00000613744 TMEM18Q96B42 140 aa18.86■□□□□ 0.61
POLR2J3-220ENST00000613744 SIGLEC12Q96PQ1 595 aa18.86■□□□□ 0.61
POLR2J3-220ENST00000613744 EML6Q6ZMW3 1958 aa18.86■□□□□ 0.61
POLR2J3-220ENST00000613744 EXPH5Q8NEV8 1989 aa18.86■□□□□ 0.61
POLR2J3-220ENST00000613744 K7EM74 188 aa18.86■□□□□ 0.61
POLR2J3-220ENST00000613744 IGLV3-1P01715 115 aa18.86■□□□□ 0.61
POLR2J3-220ENST00000613744 CYB561P49447 251 aa18.86■□□□□ 0.61
POLR2J3-220ENST00000613744 GRB2P62993 217 aaKnown RBP18.86■□□□□ 0.61
POLR2J3-220ENST00000613744 FAM185AQ8N0U4 392 aa18.86■□□□□ 0.61
POLR2J3-220ENST00000613744 PP6455Q8WZ26 134 aa18.86■□□□□ 0.61
POLR2J3-220ENST00000613744 TOMM40LQ969M1 308 aa18.86■□□□□ 0.61
POLR2J3-220ENST00000613744 Q96M66 194 aa18.86■□□□□ 0.61
POLR2J3-220ENST00000613744 LIME1Q9H400 295 aa18.86■□□□□ 0.61
POLR2J3-220ENST00000613744 SLC7A11Q9UPY5 501 aa18.86■□□□□ 0.61
POLR2J3-220ENST00000613744 POLR1DQ9Y2S0 133 aa18.86■□□□□ 0.61
POLR2J3-220ENST00000613744 PHF3Q92576 2039 aaKnown RBP18.85■□□□□ 0.61
POLR2J3-220ENST00000613744 A0A1W2PNV4 684 aa18.85■□□□□ 0.61
POLR2J3-220ENST00000613744 ZNF850A8MQ14 1090 aa18.85■□□□□ 0.61
POLR2J3-220ENST00000613744 ETV2O00321 342 aaPredicted RBP18.85■□□□□ 0.61
POLR2J3-220ENST00000613744 CEACAM4O75871 244 aa18.85■□□□□ 0.61
POLR2J3-220ENST00000613744 LINC00614P0C842 121 aa18.85■□□□□ 0.61
POLR2J3-220ENST00000613744 TDGF1P3P51864 188 aa18.85■□□□□ 0.61
POLR2J3-220ENST00000613744 C6orf201Q7Z4U5 140 aa18.85■□□□□ 0.61
POLR2J3-220ENST00000613744 SLC35G3Q8N808 338 aa18.85■□□□□ 0.61
POLR2J3-220ENST00000613744 TMEM171Q8WVE6 324 aa18.85■□□□□ 0.61
POLR2J3-220ENST00000613744 ST8SIA1Q92185 356 aa18.85■□□□□ 0.61
POLR2J3-220ENST00000613744 C10orf35Q96D05 121 aa18.85■□□□□ 0.61
POLR2J3-220ENST00000613744 MRPL13Q9BYD1 178 aaKnown RBP18.85■□□□□ 0.61
POLR2J3-220ENST00000613744 LRFN1Q9P244 771 aa18.85■□□□□ 0.61
POLR2J3-220ENST00000613744 ABI3Q9P2A4 366 aa18.85■□□□□ 0.61
POLR2J3-220ENST00000613744 ZNF705GA8MUZ8 300 aaPredicted RBP18.85■□□□□ 0.61
POLR2J3-220ENST00000613744 TRDCB7Z8K6 153 aa18.85■□□□□ 0.61
POLR2J3-220ENST00000613744 TP53I11O14683 189 aa18.85■□□□□ 0.61
POLR2J3-220ENST00000613744 CCL3P10147 92 aa18.85■□□□□ 0.61
POLR2J3-220ENST00000613744 BCL2P10415 239 aa18.85■□□□□ 0.61
POLR2J3-220ENST00000613744 IL11P20809 199 aa18.85■□□□□ 0.61
POLR2J3-220ENST00000613744 CTSSP25774 331 aa18.85■□□□□ 0.61
POLR2J3-220ENST00000613744 APLNRP35414 380 aa18.85■□□□□ 0.61
POLR2J3-220ENST00000613744 TAS2R30P59541 319 aa18.85■□□□□ 0.61
POLR2J3-220ENST00000613744 COL10A1Q03692 680 aa18.85■□□□□ 0.61
POLR2J3-220ENST00000613744 MFAP5Q13361 173 aa18.85■□□□□ 0.61
POLR2J3-220ENST00000613744 KCNMB1Q16558 191 aa18.85■□□□□ 0.61
POLR2J3-220ENST00000613744 WDFY1Q8IWB7 410 aa18.85■□□□□ 0.61
POLR2J3-220ENST00000613744 NAXEQ8NCW5 288 aa18.85■□□□□ 0.61
POLR2J3-220ENST00000613744 MOB3AQ96BX8 217 aa18.85■□□□□ 0.61
POLR2J3-220ENST00000613744 HES7Q9BYE0 225 aa18.85■□□□□ 0.61
POLR2J3-220ENST00000613744 CALHM2Q9HA72 323 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms