RNA–Protein interactions for RNA: ENST00000611625.4

CDH1-212, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 4,878 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-212ENST00000611625 MIOXQ9UGB7 285 aa10.8□□□□□ -0.68
CDH1-212ENST00000611625 KCNMB2Q9Y691 235 aa10.8□□□□□ -0.68
CDH1-212ENST00000611625 NLRC5Q86WI3 1866 aa10.8□□□□□ -0.68
CDH1-212ENST00000611625 TRAV17A0A0B4J275 112 aa10.79□□□□□ -0.68
CDH1-212ENST00000611625 XKRY2A2RUG3 117 aa10.79□□□□□ -0.68
CDH1-212ENST00000611625 CA11O75493 328 aa10.79□□□□□ -0.68
CDH1-212ENST00000611625 IGFBP3P17936 291 aaPredicted RBP10.79□□□□□ -0.68
CDH1-212ENST00000611625 PLAC9Q5JTB6 97 aa10.79□□□□□ -0.68
CDH1-212ENST00000611625 SIGLECL1Q8N7X8 197 aa10.79□□□□□ -0.68
CDH1-212ENST00000611625 KDF1Q8NAX2 398 aaPredicted RBP10.79□□□□□ -0.68
CDH1-212ENST00000611625 RNF222A6NCQ9 220 aa10.79□□□□□ -0.68
CDH1-212ENST00000611625 PATE3B3GLJ2 98 aa10.79□□□□□ -0.68
CDH1-212ENST00000611625 SPRY3O43610 288 aa10.79□□□□□ -0.68
CDH1-212ENST00000611625 TRAT1Q6PIZ9 186 aa10.79□□□□□ -0.68
CDH1-212ENST00000611625 DEFB123Q8N688 67 aa10.79□□□□□ -0.68
CDH1-212ENST00000611625 LRRC29Q8WV35 223 aa10.79□□□□□ -0.68
CDH1-212ENST00000611625 BOD1Q96IK1 185 aa10.79□□□□□ -0.68
CDH1-212ENST00000611625 SPSB2Q99619 263 aa10.79□□□□□ -0.68
CDH1-212ENST00000611625 CTDSP1Q9GZU7 261 aa10.79□□□□□ -0.68
CDH1-212ENST00000611625 IGHV1-45A0A0A0MS14 117 aa10.79□□□□□ -0.68
CDH1-212ENST00000611625 LOC105371267A0A1B0GV96 52 aa10.79□□□□□ -0.68
CDH1-212ENST00000611625 MSGN1A6NI15 193 aa10.79□□□□□ -0.68
CDH1-212ENST00000611625 DEFB109BQ30KR1 87 aa10.79□□□□□ -0.68
CDH1-212ENST00000611625 KHDC3LQ587J8 217 aa10.79□□□□□ -0.68
CDH1-212ENST00000611625 ZNF488Q96MN9 340 aa10.79□□□□□ -0.68
CDH1-212ENST00000611625 ELOA3CA0A087WX78 387 aaPredicted RBP10.79□□□□□ -0.68
CDH1-212ENST00000611625 ZNF708P17019 499 aa10.79□□□□□ -0.68
CDH1-212ENST00000611625 BMP5P22003 454 aa10.79□□□□□ -0.68
CDH1-212ENST00000611625 F2RP25116 425 aa10.79□□□□□ -0.68
CDH1-212ENST00000611625 FGF12P61328 243 aa10.79□□□□□ -0.68
CDH1-212ENST00000611625 TMPRSS7Q7RTY8 843 aa10.79□□□□□ -0.68
CDH1-212ENST00000611625 MRGPRGQ86SM5 289 aa10.79□□□□□ -0.68
CDH1-212ENST00000611625 POM121L2Q96KW2 1035 aa10.79□□□□□ -0.68
CDH1-212ENST00000611625 SLC35D1Q9NTN3 355 aa10.79□□□□□ -0.68
CDH1-212ENST00000611625 PRSS50Q9UI38 385 aa10.79□□□□□ -0.68
CDH1-212ENST00000611625 FREM3P0C091 2139 aa10.79□□□□□ -0.68
CDH1-212ENST00000611625 DNAJC13O75165 2243 aa10.78□□□□□ -0.68
CDH1-212ENST00000611625 SPTA1P02549 2419 aa10.78□□□□□ -0.68
CDH1-212ENST00000611625 SOX15O60248 233 aa10.78□□□□□ -0.68
CDH1-212ENST00000611625 ID4P47928 161 aa10.78□□□□□ -0.68
CDH1-212ENST00000611625 ERVFC1-1P60608 527 aa10.78□□□□□ -0.68
CDH1-212ENST00000611625 FNDC7Q5VTL7 733 aa10.78□□□□□ -0.68
CDH1-212ENST00000611625 DTD1Q8TEA8 209 aa10.78□□□□□ -0.68
CDH1-212ENST00000611625 E9PQ18 207 aa10.78□□□□□ -0.68
CDH1-212ENST00000611625 RAMP1O60894 148 aa10.78□□□□□ -0.68
CDH1-212ENST00000611625 ERVS71-1P61550 626 aa10.78□□□□□ -0.68
CDH1-212ENST00000611625 HIKESHIQ53FT3 197 aa10.78□□□□□ -0.68
CDH1-212ENST00000611625 BTNL3Q6UXE8 466 aa10.78□□□□□ -0.68
CDH1-212ENST00000611625 LINC00596Q86U02 117 aa10.78□□□□□ -0.68
CDH1-212ENST00000611625 CYB561D1Q8N8Q1 229 aa10.78□□□□□ -0.68
CDH1-212ENST00000611625 OR2M7Q8NG81 312 aa10.78□□□□□ -0.68
CDH1-212ENST00000611625 FBXO17Q96EF6 278 aa10.78□□□□□ -0.68
CDH1-212ENST00000611625 PRO1933Q9H354 126 aa10.78□□□□□ -0.68
CDH1-212ENST00000611625 HEXA-AS1Q9H8Q6 139 aa10.78□□□□□ -0.68
CDH1-212ENST00000611625 Q9N2K0 584 aa10.78□□□□□ -0.68
CDH1-212ENST00000611625 HS3ST3B1Q9Y662 390 aa10.78□□□□□ -0.68
CDH1-212ENST00000611625 HAND1O96004 215 aa10.78□□□□□ -0.68
CDH1-212ENST00000611625 HABP2Q14520 560 aaPredicted RBP10.78□□□□□ -0.68
CDH1-212ENST00000611625 FAM103A1Q9BTL3 118 aaKnown RBP10.78□□□□□ -0.68
CDH1-212ENST00000611625 TINAGQ9UJW2 476 aa10.78□□□□□ -0.68
CDH1-212ENST00000611625 ATP23Q9Y6H3 246 aa10.78□□□□□ -0.68
CDH1-212ENST00000611625 TP53BP1Q12888 1972 aaPredicted RBP10.78□□□□□ -0.68
CDH1-212ENST00000611625 SCTP09683 121 aa10.78□□□□□ -0.68
CDH1-212ENST00000611625 OR5B3Q8NH48 314 aa10.78□□□□□ -0.68
CDH1-212ENST00000611625 MAFAQ8NHW3 353 aaPredicted RBP10.78□□□□□ -0.68
CDH1-212ENST00000611625 SNX22Q96L94 193 aa10.78□□□□□ -0.68
CDH1-212ENST00000611625 CXXC4Q9H2H0 198 aa10.78□□□□□ -0.68
CDH1-212ENST00000611625 MANBALQ9NQG1 85 aa10.78□□□□□ -0.68
CDH1-212ENST00000611625 DVL1O14640 695 aa10.77□□□□□ -0.68
CDH1-212ENST00000611625 TIAF1O95411 115 aa10.77□□□□□ -0.68
CDH1-212ENST00000611625 HRASP01112 189 aa10.77□□□□□ -0.68
CDH1-212ENST00000611625 FGF5P12034 268 aa10.77□□□□□ -0.68
CDH1-212ENST00000611625 BPIFB3P59826 476 aa10.77□□□□□ -0.68
CDH1-212ENST00000611625 CEACAM21Q3KPI0 293 aa10.77□□□□□ -0.68
CDH1-212ENST00000611625 DHRS11Q6UWP2 260 aa10.77□□□□□ -0.68
CDH1-212ENST00000611625 C1QL2Q7Z5L3 287 aa10.77□□□□□ -0.68
CDH1-212ENST00000611625 C1orf210Q8IVY1 113 aa10.77□□□□□ -0.68
CDH1-212ENST00000611625 OR1K1Q8NGR3 316 aa10.77□□□□□ -0.68
CDH1-212ENST00000611625 OR2T10Q8NGZ9 312 aa10.77□□□□□ -0.68
CDH1-212ENST00000611625 GPR87Q9BY21 358 aa10.77□□□□□ -0.68
CDH1-212ENST00000611625 CACNA1EQ15878 2313 aa10.77□□□□□ -0.68
CDH1-212ENST00000611625 ASXL3Q9C0F0 2248 aa10.77□□□□□ -0.69
CDH1-212ENST00000611625 A0A1B0GTI1 187 aa10.77□□□□□ -0.69
CDH1-212ENST00000611625 ACTL6AO96019 429 aa10.77□□□□□ -0.69
CDH1-212ENST00000611625 DEFA4P12838 97 aa10.77□□□□□ -0.69
CDH1-212ENST00000611625 PAX6P26367 422 aa10.77□□□□□ -0.69
CDH1-212ENST00000611625 IQCJQ1A5X6 159 aa10.77□□□□□ -0.69
CDH1-212ENST00000611625 ARSJQ5FYB0 599 aaPredicted RBP10.77□□□□□ -0.69
CDH1-212ENST00000611625 CXorf66Q5JRM2 361 aaPredicted RBP10.77□□□□□ -0.69
CDH1-212ENST00000611625 LY6G6FQ5SQ64 297 aa10.77□□□□□ -0.69
CDH1-212ENST00000611625 ATRAIDQ6UW56 229 aa10.77□□□□□ -0.69
CDH1-212ENST00000611625 WFDC8Q8IUA0 241 aa10.77□□□□□ -0.69
CDH1-212ENST00000611625 LINC00518Q8N0U6 118 aa10.77□□□□□ -0.69
CDH1-212ENST00000611625 LYG1Q8N1E2 194 aa10.77□□□□□ -0.69
CDH1-212ENST00000611625 A0A1W2PQM1 296 aa10.77□□□□□ -0.69
CDH1-212ENST00000611625 MMP9P14780 707 aa10.77□□□□□ -0.69
CDH1-212ENST00000611625 TPPP2P59282 170 aa10.77□□□□□ -0.69
CDH1-212ENST00000611625 C10orf128Q5T292 105 aa10.77□□□□□ -0.69
CDH1-212ENST00000611625 FAM78BQ5VT40 261 aa10.77□□□□□ -0.69
CDH1-212ENST00000611625 OR10A7Q8NGE5 316 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms