RNA–Protein interactions for RNA: ENST00000605847.5

NEDD8-MDP1-204, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 758 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-204ENST00000605847 SDCBPO00560 298 aaPredicted RBP11.81□□□□□ -0.52
NEDD8-MDP1-204ENST00000605847 APOL3O95236 402 aa11.81□□□□□ -0.52
NEDD8-MDP1-204ENST00000605847 HSPB1P04792 205 aaKnown RBP11.81□□□□□ -0.52
NEDD8-MDP1-204ENST00000605847 RNLSQ5VYX0 342 aa11.81□□□□□ -0.52
NEDD8-MDP1-204ENST00000605847 DEFB107AQ8IZN7 70 aa11.81□□□□□ -0.52
NEDD8-MDP1-204ENST00000605847 RDH10Q8IZV5 341 aa11.81□□□□□ -0.52
NEDD8-MDP1-204ENST00000605847 LINC00311Q8N616 119 aa11.81□□□□□ -0.52
NEDD8-MDP1-204ENST00000605847 FGGYQ96C11 551 aa11.81□□□□□ -0.52
NEDD8-MDP1-204ENST00000605847 PRRG3Q9BZD7 231 aa11.81□□□□□ -0.52
NEDD8-MDP1-204ENST00000605847 NDE1Q9NXR1 346 aa11.81□□□□□ -0.52
NEDD8-MDP1-204ENST00000605847 ALMS1Q8TCU4 4167 aa11.81□□□□□ -0.52
NEDD8-MDP1-204ENST00000605847 PCLOQ9Y6V0 5065 aa11.81□□□□□ -0.52
NEDD8-MDP1-204ENST00000605847 TRAV39A0A0B4J263 110 aa11.8□□□□□ -0.52
NEDD8-MDP1-204ENST00000605847 A0A1W2PN81 502 aa11.8□□□□□ -0.52
NEDD8-MDP1-204ENST00000605847 METTL15A6NJ78 407 aa11.8□□□□□ -0.52
NEDD8-MDP1-204ENST00000605847 H0Y980 276 aa11.8□□□□□ -0.52
NEDD8-MDP1-204ENST00000605847 ARPC1BO15143 372 aaKnown RBP11.8□□□□□ -0.52
NEDD8-MDP1-204ENST00000605847 CSTBP04080 98 aaKnown RBP11.8□□□□□ -0.52
NEDD8-MDP1-204ENST00000605847 TMEM225BP0DP42 221 aa11.8□□□□□ -0.52
NEDD8-MDP1-204ENST00000605847 DBTP11182 482 aaKnown RBP11.8□□□□□ -0.52
NEDD8-MDP1-204ENST00000605847 GZMHP20718 246 aa11.8□□□□□ -0.52
NEDD8-MDP1-204ENST00000605847 CHRNA7P36544 502 aa11.8□□□□□ -0.52
NEDD8-MDP1-204ENST00000605847 KCNJ3P48549 501 aa11.8□□□□□ -0.52
NEDD8-MDP1-204ENST00000605847 ECSCRQ19T08 205 aa11.8□□□□□ -0.52
NEDD8-MDP1-204ENST00000605847 TMEM244Q5VVB8 128 aa11.8□□□□□ -0.52
NEDD8-MDP1-204ENST00000605847 RSBN1Q5VWQ0 802 aaPredicted RBP11.8□□□□□ -0.52
NEDD8-MDP1-204ENST00000605847 SSX6Q7RTT6 188 aa11.8□□□□□ -0.52
NEDD8-MDP1-204ENST00000605847 BCDIN3DQ7Z5W3 292 aaKnown RBP11.8□□□□□ -0.52
NEDD8-MDP1-204ENST00000605847 DHFR2Q86XF0 187 aa11.8□□□□□ -0.52
NEDD8-MDP1-204ENST00000605847 PRSS35Q8N3Z0 413 aa11.8□□□□□ -0.52
NEDD8-MDP1-204ENST00000605847 OR52M1Q8NGK5 317 aa11.8□□□□□ -0.52
NEDD8-MDP1-204ENST00000605847 CNIH3Q8TBE1 160 aa11.8□□□□□ -0.52
NEDD8-MDP1-204ENST00000605847 PLPPR1Q8TBJ4 325 aa11.8□□□□□ -0.52
NEDD8-MDP1-204ENST00000605847 HIPK2Q9H2X6 1198 aa11.8□□□□□ -0.52
NEDD8-MDP1-204ENST00000605847 TPSG1Q9NRR2 321 aa11.8□□□□□ -0.52
NEDD8-MDP1-204ENST00000605847 CEPT1Q9Y6K0 416 aa11.8□□□□□ -0.52
NEDD8-MDP1-204ENST00000605847 FRAS1Q86XX4 4008 aa11.8□□□□□ -0.52
NEDD8-MDP1-204ENST00000605847 PLECQ15149 4684 aaKnown RBP11.79□□□□□ -0.52
NEDD8-MDP1-204ENST00000605847 TRAV24A0A0B4J272 114 aa11.79□□□□□ -0.52
NEDD8-MDP1-204ENST00000605847 IGHV3-11P01762 117 aa11.79□□□□□ -0.52
NEDD8-MDP1-204ENST00000605847 HLA-DRB1P01911 266 aa11.79□□□□□ -0.52
NEDD8-MDP1-204ENST00000605847 RAP2AP10114 183 aa11.79□□□□□ -0.52
NEDD8-MDP1-204ENST00000605847 ANXA8P13928 327 aa11.79□□□□□ -0.52
NEDD8-MDP1-204ENST00000605847 FAHD1Q6P587 224 aa11.79□□□□□ -0.52
NEDD8-MDP1-204ENST00000605847 FAM220AQ7Z4H9 259 aa11.79□□□□□ -0.52
NEDD8-MDP1-204ENST00000605847 TMEM179BQ7Z7N9 219 aa11.79□□□□□ -0.52
NEDD8-MDP1-204ENST00000605847 C8orf31Q8N9H6 132 aa11.79□□□□□ -0.52
NEDD8-MDP1-204ENST00000605847 MINDY2Q8NBR6 621 aa11.79□□□□□ -0.52
NEDD8-MDP1-204ENST00000605847 OR13C9Q8NGT0 318 aa11.79□□□□□ -0.52
NEDD8-MDP1-204ENST00000605847 CASTOR1Q8WTX7 329 aa11.79□□□□□ -0.52
NEDD8-MDP1-204ENST00000605847 ARL11Q969Q4 196 aa11.79□□□□□ -0.52
NEDD8-MDP1-204ENST00000605847 UTP4Q969X6 686 aaKnown RBP11.79□□□□□ -0.52
NEDD8-MDP1-204ENST00000605847 ZNF251Q9BRH9 671 aa11.79□□□□□ -0.52
NEDD8-MDP1-204ENST00000605847 IGHV3-43A0A0B4J1X8 118 aa11.78□□□□□ -0.52
NEDD8-MDP1-204ENST00000605847 PRKYO43930 277 aa11.78□□□□□ -0.52
NEDD8-MDP1-204ENST00000605847 IGHV3-43DP0DP04 118 aa11.78□□□□□ -0.52
NEDD8-MDP1-204ENST00000605847 BLVRBP30043 206 aaPredicted RBP11.78□□□□□ -0.52
NEDD8-MDP1-204ENST00000605847 PAX5Q02548 391 aa11.78□□□□□ -0.52
NEDD8-MDP1-204ENST00000605847 NXNL2Q5VZ03 156 aa11.78□□□□□ -0.52
NEDD8-MDP1-204ENST00000605847 ST6GALNAC5Q9BVH7 336 aa11.78□□□□□ -0.52
NEDD8-MDP1-204ENST00000605847 CST11Q9H112 138 aa11.78□□□□□ -0.52
NEDD8-MDP1-204ENST00000605847 GFOD1Q9NXC2 390 aa11.78□□□□□ -0.52
NEDD8-MDP1-204ENST00000605847 FOXA2Q9Y261 457 aaPredicted RBP11.78□□□□□ -0.52
NEDD8-MDP1-204ENST00000605847 IGHV7-81A0A0B4J1V7 117 aa11.77□□□□□ -0.53
NEDD8-MDP1-204ENST00000605847 A0A1W2PQL4 384 aaPredicted RBP11.77□□□□□ -0.53
NEDD8-MDP1-204ENST00000605847 SULT1C4O75897 302 aa11.77□□□□□ -0.53
NEDD8-MDP1-204ENST00000605847 PRKACGP22612 351 aa11.77□□□□□ -0.53
NEDD8-MDP1-204ENST00000605847 CD40LGP29965 261 aa11.77□□□□□ -0.53
NEDD8-MDP1-204ENST00000605847 CRISP1P54107 249 aa11.77□□□□□ -0.53
NEDD8-MDP1-204ENST00000605847 ACTBP60709 375 aa11.77□□□□□ -0.53
NEDD8-MDP1-204ENST00000605847 PYHIN1Q6K0P9 492 aa11.77□□□□□ -0.53
NEDD8-MDP1-204ENST00000605847 LIN54Q6MZP7 749 aa11.77□□□□□ -0.53
NEDD8-MDP1-204ENST00000605847 SLC25A48Q6ZT89 311 aaKnown RBP11.77□□□□□ -0.53
NEDD8-MDP1-204ENST00000605847 HS3ST5Q8IZT8 346 aa11.77□□□□□ -0.53
NEDD8-MDP1-204ENST00000605847 UBALD1Q8TB05 177 aa11.77□□□□□ -0.53
NEDD8-MDP1-204ENST00000605847 ANKRD60Q9BZ19 345 aa11.77□□□□□ -0.53
NEDD8-MDP1-204ENST00000605847 MYRFQ9Y2G1 1151 aa11.77□□□□□ -0.53
NEDD8-MDP1-204ENST00000605847 SHISA3A0PJX4 238 aa11.76□□□□□ -0.53
NEDD8-MDP1-204ENST00000605847 RGS11O94810 467 aa11.76□□□□□ -0.53
NEDD8-MDP1-204ENST00000605847 MT-ND2P03891 347 aa11.76□□□□□ -0.53
NEDD8-MDP1-204ENST00000605847 OR2T7P0C7T2 308 aa11.76□□□□□ -0.53
NEDD8-MDP1-204ENST00000605847 FSTP19883 344 aa11.76□□□□□ -0.53
NEDD8-MDP1-204ENST00000605847 RAB40BQ12829 278 aa11.76□□□□□ -0.53
NEDD8-MDP1-204ENST00000605847 LSAMPQ13449 338 aa11.76□□□□□ -0.53
NEDD8-MDP1-204ENST00000605847 IL13RA2Q14627 380 aa11.76□□□□□ -0.53
NEDD8-MDP1-204ENST00000605847 Q3ZCU0 254 aa11.76□□□□□ -0.53
NEDD8-MDP1-204ENST00000605847 LCN12Q6JVE5 192 aa11.76□□□□□ -0.53
NEDD8-MDP1-204ENST00000605847 GID4Q8IVV7 300 aa11.76□□□□□ -0.53
NEDD8-MDP1-204ENST00000605847 TCTEX1D1Q8N7M0 179 aa11.76□□□□□ -0.53
NEDD8-MDP1-204ENST00000605847 TCEANCQ8N8B7 351 aa11.76□□□□□ -0.53
NEDD8-MDP1-204ENST00000605847 OR13C3Q8NGS6 347 aa11.76□□□□□ -0.53
NEDD8-MDP1-204ENST00000605847 LRGUKQ96M69 825 aa11.76□□□□□ -0.53
NEDD8-MDP1-204ENST00000605847 GNG8Q9UK08 70 aa11.76□□□□□ -0.53
NEDD8-MDP1-204ENST00000605847 A3GALT2U3KPV4 340 aa11.76□□□□□ -0.53
NEDD8-MDP1-204ENST00000605847 TMEM30CPA0ZSE6 113 aa11.75□□□□□ -0.53
NEDD8-MDP1-204ENST00000605847 M0R129 80 aa11.75□□□□□ -0.53
NEDD8-MDP1-204ENST00000605847 NBR2O15453 112 aa11.75□□□□□ -0.53
NEDD8-MDP1-204ENST00000605847 SOX15O60248 233 aa11.75□□□□□ -0.53
NEDD8-MDP1-204ENST00000605847 BRI3O95415 125 aa11.75□□□□□ -0.53
NEDD8-MDP1-204ENST00000605847 FAM107AO95990 144 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms