RNA–Protein interactions for RNA: ENST00000601357.6

SSBP4-209, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 606 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-209ENST00000601357 DERL3Q96Q80 235 aa18.05■□□□□ 0.48
SSBP4-209ENST00000601357 PNMA8CA0A1B0GUJ8 204 aa18.04■□□□□ 0.48
SSBP4-209ENST00000601357 TMEM30CPA0ZSE6 113 aa18.04■□□□□ 0.48
SSBP4-209ENST00000601357 C15orf65H3BRN8 121 aa18.04■□□□□ 0.48
SSBP4-209ENST00000601357 LPLP06858 475 aa18.04■□□□□ 0.48
SSBP4-209ENST00000601357 FAM106CPP0CH98 169 aa18.04■□□□□ 0.48
SSBP4-209ENST00000601357 MADCAM1Q13477 382 aa18.04■□□□□ 0.48
SSBP4-209ENST00000601357 DIAPH2-AS1Q14236 149 aa18.04■□□□□ 0.48
SSBP4-209ENST00000601357 LTC4SQ16873 150 aa18.04■□□□□ 0.48
SSBP4-209ENST00000601357 ZNF497Q6ZNH5 498 aa18.04■□□□□ 0.48
SSBP4-209ENST00000601357 NANOGP1Q8N7R0 232 aa18.04■□□□□ 0.48
SSBP4-209ENST00000601357 OR5AU1Q8NGC0 362 aa18.04■□□□□ 0.48
SSBP4-209ENST00000601357 RCC2Q9P258 522 aaKnown RBP18.04■□□□□ 0.48
SSBP4-209ENST00000601357 MRPS28Q9Y2Q9 187 aaKnown RBP18.04■□□□□ 0.48
SSBP4-209ENST00000601357 A0A1W2PPK0 400 aa18.03■□□□□ 0.48
SSBP4-209ENST00000601357 M0QZK8 103 aa18.03■□□□□ 0.48
SSBP4-209ENST00000601357 PIN1P1O15428 100 aa18.03■□□□□ 0.48
SSBP4-209ENST00000601357 CELP19835 753 aa18.03■□□□□ 0.48
SSBP4-209ENST00000601357 GNG10P50151 68 aa18.03■□□□□ 0.48
SSBP4-209ENST00000601357 TCTEX1D4Q5JR98 221 aa18.03■□□□□ 0.48
SSBP4-209ENST00000601357 STX19Q8N4C7 294 aa18.03■□□□□ 0.48
SSBP4-209ENST00000601357 OR4F17Q8NGA8 305 aa18.03■□□□□ 0.48
SSBP4-209ENST00000601357 TFAP2CQ92754 450 aa18.03■□□□□ 0.48
SSBP4-209ENST00000601357 MUL1Q969V5 352 aa18.03■□□□□ 0.48
SSBP4-209ENST00000601357 R3HDM4Q96D70 268 aa18.03■□□□□ 0.48
SSBP4-209ENST00000601357 MRPS24Q96EL2 167 aaKnown RBP18.03■□□□□ 0.48
SSBP4-209ENST00000601357 OR4F4Q96R69 305 aa18.03■□□□□ 0.48
SSBP4-209ENST00000601357 MYL12BO14950 172 aa18.02■□□□□ 0.48
SSBP4-209ENST00000601357 MT-ND4P03905 459 aa18.02■□□□□ 0.48
SSBP4-209ENST00000601357 SNRNP70P08621 437 aaKnown RBP18.02■□□□□ 0.48
SSBP4-209ENST00000601357 RAB7AP51149 207 aa18.02■□□□□ 0.48
SSBP4-209ENST00000601357 ATAD3CQ5T2N8 411 aa18.02■□□□□ 0.48
SSBP4-209ENST00000601357 GLIPR1L1Q6UWM5 242 aa18.02■□□□□ 0.48
SSBP4-209ENST00000601357 OR8H3Q8N146 312 aa18.02■□□□□ 0.48
SSBP4-209ENST00000601357 JAGN1Q8N5M9 183 aa18.02■□□□□ 0.48
SSBP4-209ENST00000601357 DRAM1Q8N682 238 aa18.02■□□□□ 0.48
SSBP4-209ENST00000601357 BPIFB6Q8NFQ5 453 aa18.02■□□□□ 0.48
SSBP4-209ENST00000601357 OR52M1Q8NGK5 317 aa18.02■□□□□ 0.48
SSBP4-209ENST00000601357 OR56B4Q8NH76 319 aa18.02■□□□□ 0.48
SSBP4-209ENST00000601357 SPACA1Q9HBV2 294 aa18.02■□□□□ 0.48
SSBP4-209ENST00000601357 MOB4Q9Y3A3 225 aa18.02■□□□□ 0.48
SSBP4-209ENST00000601357 SH2D7A6NKC9 451 aaPredicted RBP18.01■□□□□ 0.47
SSBP4-209ENST00000601357 ORC5O43913 435 aa18.01■□□□□ 0.47
SSBP4-209ENST00000601357 LOXL3P58215 753 aa18.01■□□□□ 0.47
SSBP4-209ENST00000601357 RNLSQ5VYX0 342 aa18.01■□□□□ 0.47
SSBP4-209ENST00000601357 CENPVQ7Z7K6 275 aaPredicted RBP18.01■□□□□ 0.47
SSBP4-209ENST00000601357 C8orf31Q8N9H6 132 aa18.01■□□□□ 0.47
SSBP4-209ENST00000601357 ANKRD65E5RJM6 399 aa18■□□□□ 0.47
SSBP4-209ENST00000601357 MAS1P04201 325 aa18■□□□□ 0.47
SSBP4-209ENST00000601357 ZNF816Q0VGE8 651 aaPredicted RBP18■□□□□ 0.47
SSBP4-209ENST00000601357 GAPTQ8N292 157 aa18■□□□□ 0.47
SSBP4-209ENST00000601357 OR10X1Q8NGY0 326 aa18■□□□□ 0.47
SSBP4-209ENST00000601357 THRSPQ92748 146 aa18■□□□□ 0.47
SSBP4-209ENST00000601357 ARL11Q969Q4 196 aa18■□□□□ 0.47
SSBP4-209ENST00000601357 A0A1W2PPE3 182 aa17.99■□□□□ 0.47
SSBP4-209ENST00000601357 AIPO00170 330 aa17.99■□□□□ 0.47
SSBP4-209ENST00000601357 AWAT2Q6E213 333 aa17.99■□□□□ 0.47
SSBP4-209ENST00000601357 C10orf99Q6UWK7 81 aa17.99■□□□□ 0.47
SSBP4-209ENST00000601357 LINC00311Q8N616 119 aa17.99■□□□□ 0.47
SSBP4-209ENST00000601357 NKAIN3Q8N8D7 197 aa17.99■□□□□ 0.47
SSBP4-209ENST00000601357 TMEM104Q8NE00 496 aa17.99■□□□□ 0.47
SSBP4-209ENST00000601357 NEK7Q8TDX7 302 aa17.99■□□□□ 0.47
SSBP4-209ENST00000601357 CCDC107Q8WV48 283 aa17.99■□□□□ 0.47
SSBP4-209ENST00000601357 VCXQ9H320 206 aa17.99■□□□□ 0.47
SSBP4-209ENST00000601357 ERGIC3Q9Y282 383 aa17.99■□□□□ 0.47
SSBP4-209ENST00000601357 FAM90A10PA6NDY2 464 aa17.98■□□□□ 0.47
SSBP4-209ENST00000601357 FAM90A7PA6NKC0 464 aa17.98■□□□□ 0.47
SSBP4-209ENST00000601357 FAM90A23PA8MXZ1 464 aa17.98■□□□□ 0.47
SSBP4-209ENST00000601357 SDCBPO00560 298 aaPredicted RBP17.98■□□□□ 0.47
SSBP4-209ENST00000601357 HSD17B6O14756 317 aa17.98■□□□□ 0.47
SSBP4-209ENST00000601357 SC5DO75845 299 aa17.98■□□□□ 0.47
SSBP4-209ENST00000601357 CDK1P06493 297 aa17.98■□□□□ 0.47
SSBP4-209ENST00000601357 MAPK3P27361 379 aaPredicted RBP17.98■□□□□ 0.47
SSBP4-209ENST00000601357 RAB12Q6IQ22 244 aa17.98■□□□□ 0.47
SSBP4-209ENST00000601357 FAM53AQ6NSI3 398 aaPredicted RBP17.98■□□□□ 0.47
SSBP4-209ENST00000601357 C5orf56Q8N8D9 126 aa17.98■□□□□ 0.47
SSBP4-209ENST00000601357 UBALD1Q8TB05 177 aa17.98■□□□□ 0.47
SSBP4-209ENST00000601357 UQCC2Q9BRT2 126 aa17.98■□□□□ 0.47
SSBP4-209ENST00000601357 BANF2Q9H503 90 aa17.98■□□□□ 0.47
SSBP4-209ENST00000601357 DCLRE1BQ9H816 532 aa17.98■□□□□ 0.47
SSBP4-209ENST00000601357 GFOD1Q9NXC2 390 aa17.98■□□□□ 0.47
SSBP4-209ENST00000601357 A0A1W2PRX2 142 aa17.97■□□□□ 0.47
SSBP4-209ENST00000601357 MCRIP1C9JLW8 97 aa17.97■□□□□ 0.47
SSBP4-209ENST00000601357 MGMTP16455 207 aa17.97■□□□□ 0.47
SSBP4-209ENST00000601357 TMEM11P17152 192 aa17.97■□□□□ 0.47
SSBP4-209ENST00000601357 GP2P55259 537 aaKnown RBP17.97■□□□□ 0.47
SSBP4-209ENST00000601357 EBI3Q14213 229 aa17.97■□□□□ 0.47
SSBP4-209ENST00000601357 INSL4Q14641 139 aa17.97■□□□□ 0.47
SSBP4-209ENST00000601357 Q3ZCU0 254 aa17.97■□□□□ 0.47
SSBP4-209ENST00000601357 OXLD1Q5BKU9 147 aa17.97■□□□□ 0.47
SSBP4-209ENST00000601357 SIGIRRQ6IA17 410 aa17.97■□□□□ 0.47
SSBP4-209ENST00000601357 UNQ9370/PRO34162Q6UXP9 181 aa17.97■□□□□ 0.47
SSBP4-209ENST00000601357 MYDGFQ969H8 173 aa17.97■□□□□ 0.47
SSBP4-209ENST00000601357 ST6GALNAC6Q969X2 333 aa17.97■□□□□ 0.47
SSBP4-209ENST00000601357 Q96M66 194 aa17.97■□□□□ 0.47
SSBP4-209ENST00000601357 MND1Q9BWT6 205 aa17.97■□□□□ 0.47
SSBP4-209ENST00000601357 NKX1-2Q9UD57 310 aaPredicted RBP17.97■□□□□ 0.47
SSBP4-209ENST00000601357 LSM2Q9Y333 95 aaKnown RBP17.97■□□□□ 0.47
SSBP4-209ENST00000601357 TSSC4Q9Y5U2 329 aaPredicted RBP17.97■□□□□ 0.47
SSBP4-209ENST00000601357 IGHV1-3A0A0C4DH29 117 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms