RNA–Protein interactions for RNA: ENST00000600927.1

ZNF548-211, Transcript of zinc finger protein 548, humanhuman

TSL 3

Gene ZNF548, Length 616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-211ENST00000600927 CHMP1AQ9HD42 196 aaPredicted RBP9.65□□□□□ -0.86
ZNF548-211ENST00000600927 MBNL3Q9NUK0 354 aaKnown RBP9.65□□□□□ -0.86
ZNF548-211ENST00000600927 C1orf123Q9NWV4 160 aa9.65□□□□□ -0.86
ZNF548-211ENST00000600927 RNF7Q9UBF6 113 aa9.65□□□□□ -0.86
ZNF548-211ENST00000600927 SHPKQ9UHJ6 478 aa9.65□□□□□ -0.86
ZNF548-211ENST00000600927 OPN4Q9UHM6 478 aa9.65□□□□□ -0.86
ZNF548-211ENST00000600927 NIPBLQ6KC79 2804 aaeCLIP9.64□□□□□ -0.87
ZNF548-211ENST00000600927 IGHV4-30-2A0A087WSY4 118 aa9.64□□□□□ -0.87
ZNF548-211ENST00000600927 MEIKINA0A087WXM9 373 aa9.64□□□□□ -0.87
ZNF548-211ENST00000600927 OR2AT4A6NND4 320 aa9.64□□□□□ -0.87
ZNF548-211ENST00000600927 VWC2LB2RUY7 222 aa9.64□□□□□ -0.87
ZNF548-211ENST00000600927 NPIPB11E5RHQ5 1161 aa9.64□□□□□ -0.87
ZNF548-211ENST00000600927 SSNA1O43805 119 aa9.64□□□□□ -0.87
ZNF548-211ENST00000600927 FSTL3O95633 263 aa9.64□□□□□ -0.87
ZNF548-211ENST00000600927 CTSDP07339 412 aaPredicted RBP9.64□□□□□ -0.87
ZNF548-211ENST00000600927 VSIG10L2P0DP72 767 aa9.64□□□□□ -0.87
ZNF548-211ENST00000600927 ANXA3P12429 323 aa9.64□□□□□ -0.87
ZNF548-211ENST00000600927 ANXA7P20073 488 aaKnown RBP9.64□□□□□ -0.87
ZNF548-211ENST00000600927 RIPPLY3P57055 190 aa9.64□□□□□ -0.87
ZNF548-211ENST00000600927 DSCR9P59020 149 aa9.64□□□□□ -0.87
ZNF548-211ENST00000600927 KCNJ8Q15842 424 aa9.64□□□□□ -0.87
ZNF548-211ENST00000600927 PAN3Q58A45 887 aaKnown RBP9.64□□□□□ -0.87
ZNF548-211ENST00000600927 PRAMEF6Q5VXH4 476 aa9.64□□□□□ -0.87
ZNF548-211ENST00000600927 TRAT1Q6PIZ9 186 aa9.64□□□□□ -0.87
ZNF548-211ENST00000600927 ZNF497Q6ZNH5 498 aa9.64□□□□□ -0.87
ZNF548-211ENST00000600927 LYG2Q86SG7 212 aa9.64□□□□□ -0.87
ZNF548-211ENST00000600927 ZNF525Q8N782 197 aa9.64□□□□□ -0.87
ZNF548-211ENST00000600927 MRPL30Q8TCC3 161 aaKnown RBP9.64□□□□□ -0.87
ZNF548-211ENST00000600927 C10orf105Q8TEF2 133 aa9.64□□□□□ -0.87
ZNF548-211ENST00000600927 FAM216AQ8WUB2 273 aa9.64□□□□□ -0.87
ZNF548-211ENST00000600927 LRRC29Q8WV35 223 aa9.64□□□□□ -0.87
ZNF548-211ENST00000600927 MRGPRFQ96AM1 343 aa9.64□□□□□ -0.87
ZNF548-211ENST00000600927 HDHD3Q9BSH5 251 aaPredicted RBP9.64□□□□□ -0.87
ZNF548-211ENST00000600927 REG4Q9BYZ8 158 aa9.64□□□□□ -0.87
ZNF548-211ENST00000600927 WDR13Q9H1Z4 485 aa9.64□□□□□ -0.87
ZNF548-211ENST00000600927 RANBP3Q9H6Z4 567 aaPredicted RBP9.64□□□□□ -0.87
ZNF548-211ENST00000600927 ZNF581Q9P0T4 197 aa9.64□□□□□ -0.87
ZNF548-211ENST00000600927 VSIG4Q9Y279 399 aa9.64□□□□□ -0.87
ZNF548-211ENST00000600927 IGKV1D-8A0A087WSZ0 117 aa9.63□□□□□ -0.87
ZNF548-211ENST00000600927 hCG_1807616A0A1W2PRN6 198 aa9.63□□□□□ -0.87
ZNF548-211ENST00000600927 RNF223E7ERA6 249 aa9.63□□□□□ -0.87
ZNF548-211ENST00000600927 M0R233 179 aa9.63□□□□□ -0.87
ZNF548-211ENST00000600927 FABP7O15540 132 aa9.63□□□□□ -0.87
ZNF548-211ENST00000600927 SPRY3O43610 288 aa9.63□□□□□ -0.87
ZNF548-211ENST00000600927 LY6HO94772 140 aa9.63□□□□□ -0.87
ZNF548-211ENST00000600927 OR2A4O95047 310 aa9.63□□□□□ -0.87
ZNF548-211ENST00000600927 DUS4LO95620 317 aaKnown RBP9.63□□□□□ -0.87
ZNF548-211ENST00000600927 LY6G6DO95868 133 aa9.63□□□□□ -0.87
ZNF548-211ENST00000600927 C1QBP02746 253 aa9.63□□□□□ -0.87
ZNF548-211ENST00000600927 TK1P04183 234 aa9.63□□□□□ -0.87
ZNF548-211ENST00000600927 GSTT2P0CG29 244 aa9.63□□□□□ -0.87
ZNF548-211ENST00000600927 MUC1P15941 1255 aaPredicted RBP9.63□□□□□ -0.87
ZNF548-211ENST00000600927 ZBTB25P24278 435 aa9.63□□□□□ -0.87
ZNF548-211ENST00000600927 ERP29P30040 261 aaKnown RBP9.63□□□□□ -0.87
ZNF548-211ENST00000600927 PDCD1Q15116 288 aa9.63□□□□□ -0.87
ZNF548-211ENST00000600927 FCN2Q15485 313 aa9.63□□□□□ -0.87
ZNF548-211ENST00000600927 C4orf46Q504U0 113 aa9.63□□□□□ -0.87
ZNF548-211ENST00000600927 BRICD5Q6PL45 260 aa9.63□□□□□ -0.87
ZNF548-211ENST00000600927 CLEC2AQ6UVW9 174 aa9.63□□□□□ -0.87
ZNF548-211ENST00000600927 ZNF826PQ6ZT77 177 aa9.63□□□□□ -0.87
ZNF548-211ENST00000600927 C1orf87Q8N0U7 546 aa9.63□□□□□ -0.87
ZNF548-211ENST00000600927 C12orf45Q8N5I9 185 aaPredicted RBP9.63□□□□□ -0.87
ZNF548-211ENST00000600927 GCSAMQ8N6F7 178 aa9.63□□□□□ -0.87
ZNF548-211ENST00000600927 DRAXINQ8NBI3 349 aaPredicted RBP9.63□□□□□ -0.87
ZNF548-211ENST00000600927 OR5D13Q8NGL4 314 aa9.63□□□□□ -0.87
ZNF548-211ENST00000600927 ITLN1Q8WWA0 313 aa9.63□□□□□ -0.87
ZNF548-211ENST00000600927 RDH5Q92781 318 aa9.63□□□□□ -0.87
ZNF548-211ENST00000600927 DACT3Q96B18 629 aaPredicted RBP9.63□□□□□ -0.87
ZNF548-211ENST00000600927 SNX22Q96L94 193 aa9.63□□□□□ -0.87
ZNF548-211ENST00000600927 OR2A7Q96R45 310 aa9.63□□□□□ -0.87
ZNF548-211ENST00000600927 ZNF2Q9BSG1 426 aaPredicted RBP9.63□□□□□ -0.87
ZNF548-211ENST00000600927 CABLES2Q9BTV7 478 aa9.63□□□□□ -0.87
ZNF548-211ENST00000600927 TOLLIPQ9H0E2 274 aa9.63□□□□□ -0.87
ZNF548-211ENST00000600927 DNTTIP1Q9H147 329 aa9.63□□□□□ -0.87
ZNF548-211ENST00000600927 GCM1Q9NP62 436 aa9.63□□□□□ -0.87
ZNF548-211ENST00000600927 UFSP2Q9NUQ7 469 aa9.63□□□□□ -0.87
ZNF548-211ENST00000600927 IL36RNQ9UBH0 155 aa9.63□□□□□ -0.87
ZNF548-211ENST00000600927 C14orf166Q9Y224 244 aaKnown RBP9.63□□□□□ -0.87
ZNF548-211ENST00000600927 CR1P17927 2039 aa9.63□□□□□ -0.87
ZNF548-211ENST00000600927 C2CD3Q4AC94 2353 aa9.62□□□□□ -0.87
ZNF548-211ENST00000600927 PIGBOS1A0A0B4J2F0 54 aa9.62□□□□□ -0.87
ZNF548-211ENST00000600927 TMEM30CPA0ZSE6 113 aa9.62□□□□□ -0.87
ZNF548-211ENST00000600927 C9orf170A2RU37 121 aa9.62□□□□□ -0.87
ZNF548-211ENST00000600927 OR5H14A6NHG9 310 aa9.62□□□□□ -0.87
ZNF548-211ENST00000600927 RFPL4AA6NLU0 287 aa9.62□□□□□ -0.87
ZNF548-211ENST00000600927 LRRC30A6NM36 301 aa9.62□□□□□ -0.87
ZNF548-211ENST00000600927 RFPL4AL1F8VTS6 287 aa9.62□□□□□ -0.87
ZNF548-211ENST00000600927 NDUFS8O00217 210 aa9.62□□□□□ -0.87
ZNF548-211ENST00000600927 SMAD7O15105 426 aaKnown RBP9.62□□□□□ -0.87
ZNF548-211ENST00000600927 TUSC2O75896 110 aa9.62□□□□□ -0.87
ZNF548-211ENST00000600927 RGS11O94810 467 aa9.62□□□□□ -0.87
ZNF548-211ENST00000600927 GIPP09681 153 aaPredicted RBP9.62□□□□□ -0.87
ZNF548-211ENST00000600927 IRF2P14316 349 aa9.62□□□□□ -0.87
ZNF548-211ENST00000600927 SLC25A16P16260 332 aa9.62□□□□□ -0.87
ZNF548-211ENST00000600927 DUSP1P28562 367 aa9.62□□□□□ -0.87
ZNF548-211ENST00000600927 PRDX2P32119 198 aa9.62□□□□□ -0.87
ZNF548-211ENST00000600927 EIF2B2P49770 351 aaKnown RBP9.62□□□□□ -0.87
ZNF548-211ENST00000600927 RAP2BP61225 183 aa9.62□□□□□ -0.87
ZNF548-211ENST00000600927 IL13RA1P78552 427 aa9.62□□□□□ -0.87
ZNF548-211ENST00000600927 CR1LQ2VPA4 569 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms