RNA–Protein interactions for RNA: ENST00000600733.5

SHKBP1-225, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5 BASIC

Gene SHKBP1, Length 2,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-225ENST00000600733 COX5BP10606 129 aa17.26■□□□□ 0.35
SHKBP1-225ENST00000600733 ZNF154Q13106 437 aa17.26■□□□□ 0.35
SHKBP1-225ENST00000600733 OR1C1Q15619 314 aa17.26■□□□□ 0.35
SHKBP1-225ENST00000600733 LINC00696Q6ZRV3 163 aa17.26■□□□□ 0.35
SHKBP1-225ENST00000600733 IL22RA1Q8N6P7 574 aa17.26■□□□□ 0.35
SHKBP1-225ENST00000600733 OR1J1Q8NGS3 322 aa17.26■□□□□ 0.35
SHKBP1-225ENST00000600733 OR5P3Q8WZ94 311 aa17.26■□□□□ 0.35
SHKBP1-225ENST00000600733 TAAR3PQ9P1P4 343 aa17.26■□□□□ 0.35
SHKBP1-225ENST00000600733 A0A0G2JRQ6 117 aa17.25■□□□□ 0.35
SHKBP1-225ENST00000600733 ACAA1P09110 424 aaPredicted RBP17.25■□□□□ 0.35
SHKBP1-225ENST00000600733 EIF2S3LQ2VIR3 472 aaKnown RBP17.25■□□□□ 0.35
SHKBP1-225ENST00000600733 NUFIP2Q7Z417 695 aaKnown RBP17.25■□□□□ 0.35
SHKBP1-225ENST00000600733 C1orf210Q8IVY1 113 aa17.25■□□□□ 0.35
SHKBP1-225ENST00000600733 TAAR9Q96RI9 348 aa17.25■□□□□ 0.35
SHKBP1-225ENST00000600733 R4GN57 208 aa17.25■□□□□ 0.35
SHKBP1-225ENST00000600733 TRAV24A0A0B4J272 114 aa17.24■□□□□ 0.35
SHKBP1-225ENST00000600733 C5orf52A6NGY3 159 aa17.24■□□□□ 0.35
SHKBP1-225ENST00000600733 PRSS44E7EML9 344 aa17.24■□□□□ 0.35
SHKBP1-225ENST00000600733 H0Y980 276 aa17.24■□□□□ 0.35
SHKBP1-225ENST00000600733 SLC34A2O95436 690 aa17.24■□□□□ 0.35
SHKBP1-225ENST00000600733 CTXN2P0C2S0 81 aa17.24■□□□□ 0.35
SHKBP1-225ENST00000600733 AGAP20933 346 aa17.24■□□□□ 0.35
SHKBP1-225ENST00000600733 RHEBQ15382 184 aa17.24■□□□□ 0.35
SHKBP1-225ENST00000600733 SOHLH1Q5JUK2 328 aa17.24■□□□□ 0.35
SHKBP1-225ENST00000600733 TMEM251Q8N6I4 163 aa17.24■□□□□ 0.35
SHKBP1-225ENST00000600733 OR5D13Q8NGL4 314 aa17.24■□□□□ 0.35
SHKBP1-225ENST00000600733 OR51H1Q8NH63 302 aa17.24■□□□□ 0.35
SHKBP1-225ENST00000600733 A0A1B0GW64 132 aa17.24■□□□□ 0.35
SHKBP1-225ENST00000600733 RBFOX3A6NFN3 312 aa17.24■□□□□ 0.35
SHKBP1-225ENST00000600733 ARGFXA6NJG6 315 aa17.24■□□□□ 0.35
SHKBP1-225ENST00000600733 S100A6P06703 90 aa17.24■□□□□ 0.35
SHKBP1-225ENST00000600733 RAB5AP20339 215 aa17.24■□□□□ 0.35
SHKBP1-225ENST00000600733 WNT5AP41221 380 aa17.24■□□□□ 0.35
SHKBP1-225ENST00000600733 IZUMO4Q1ZYL8 232 aa17.24■□□□□ 0.35
SHKBP1-225ENST00000600733 ZNF561Q8N587 486 aa17.24■□□□□ 0.35
SHKBP1-225ENST00000600733 ABHD14BQ96IU4 210 aa17.24■□□□□ 0.35
SHKBP1-225ENST00000600733 SPRY4Q9C004 299 aa17.24■□□□□ 0.35
SHKBP1-225ENST00000600733 RNF115Q9Y4L5 304 aa17.24■□□□□ 0.35
SHKBP1-225ENST00000600733 ARHGAP21Q5T5U3 1957 aa17.24■□□□□ 0.35
SHKBP1-225ENST00000600733 URB1O60287 2271 aaKnown RBP17.23■□□□□ 0.35
SHKBP1-225ENST00000600733 DUXBA0A1W2PPF3 345 aa17.23■□□□□ 0.35
SHKBP1-225ENST00000600733 H3BP45 60 aa17.23■□□□□ 0.35
SHKBP1-225ENST00000600733 WRBO00258 174 aa17.23■□□□□ 0.35
SHKBP1-225ENST00000600733 HSPA12AO43301 675 aa17.23■□□□□ 0.35
SHKBP1-225ENST00000600733 F2RP25116 425 aa17.23■□□□□ 0.35
SHKBP1-225ENST00000600733 ARR3P36575 388 aa17.23■□□□□ 0.35
SHKBP1-225ENST00000600733 PAX9P55771 341 aa17.23■□□□□ 0.35
SHKBP1-225ENST00000600733 HAGHQ16775 308 aa17.23■□□□□ 0.35
SHKBP1-225ENST00000600733 HIKESHIQ53FT3 197 aa17.23■□□□□ 0.35
SHKBP1-225ENST00000600733 MED12LQ86YW9 2145 aa17.23■□□□□ 0.35
SHKBP1-225ENST00000600733 RHBDL1O75783 438 aa17.23■□□□□ 0.35
SHKBP1-225ENST00000600733 ZNF14P17017 642 aaPredicted RBP17.23■□□□□ 0.35
SHKBP1-225ENST00000600733 CEBPGP53567 150 aa17.23■□□□□ 0.35
SHKBP1-225ENST00000600733 PLP2Q04941 152 aa17.23■□□□□ 0.35
SHKBP1-225ENST00000600733 ZNF324BQ6AW86 544 aaPredicted RBP17.23■□□□□ 0.35
SHKBP1-225ENST00000600733 RBMS3Q6XE24 437 aaKnown RBP17.23■□□□□ 0.35
SHKBP1-225ENST00000600733 IL1F10Q8WWZ1 152 aa17.23■□□□□ 0.35
SHKBP1-225ENST00000600733 ZPBPQ9BS86 351 aa17.23■□□□□ 0.35
SHKBP1-225ENST00000600733 STRADBQ9C0K7 418 aa17.23■□□□□ 0.35
SHKBP1-225ENST00000600733 PRSS50Q9UI38 385 aa17.23■□□□□ 0.35
SHKBP1-225ENST00000600733 KNTC1P50748 2209 aa17.23■□□□□ 0.35
SHKBP1-225ENST00000600733 GPR179Q6PRD1 2367 aa17.22■□□□□ 0.35
SHKBP1-225ENST00000600733 TRAV39A0A0B4J263 110 aa17.22■□□□□ 0.35
SHKBP1-225ENST00000600733 A0A1W2PNU3 283 aaPredicted RBP17.22■□□□□ 0.35
SHKBP1-225ENST00000600733 C19orf67A6NJJ6 358 aa17.22■□□□□ 0.35
SHKBP1-225ENST00000600733 ANKRD30BLA7E2S9 258 aa17.22■□□□□ 0.35
SHKBP1-225ENST00000600733 SPATA46Q5T0L3 261 aa17.22■□□□□ 0.35
SHKBP1-225ENST00000600733 ADAM5Q6NVV9 412 aa17.22■□□□□ 0.35
SHKBP1-225ENST00000600733 OR10J5Q8NHC4 309 aa17.22■□□□□ 0.35
SHKBP1-225ENST00000600733 C12orf49Q9H741 205 aa17.22■□□□□ 0.35
SHKBP1-225ENST00000600733 ERRFI1Q9UJM3 462 aaPredicted RBP17.22■□□□□ 0.35
SHKBP1-225ENST00000600733 OR2W1Q9Y3N9 320 aa17.22■□□□□ 0.35
SHKBP1-225ENST00000600733 LIPGQ9Y5X9 500 aa17.22■□□□□ 0.35
SHKBP1-225ENST00000600733 PSG2P11465 335 aa17.22■□□□□ 0.35
SHKBP1-225ENST00000600733 CA6P23280 308 aa17.22■□□□□ 0.35
SHKBP1-225ENST00000600733 OR2B8PP59922 312 aa17.22■□□□□ 0.35
SHKBP1-225ENST00000600733 PLGLB1Q02325 96 aa17.22■□□□□ 0.35
SHKBP1-225ENST00000600733 BAXQ07812 192 aa17.22■□□□□ 0.35
SHKBP1-225ENST00000600733 OR2T2Q6IF00 324 aa17.22■□□□□ 0.35
SHKBP1-225ENST00000600733 VASH2Q86V25 355 aa17.22■□□□□ 0.35
SHKBP1-225ENST00000600733 FAM58AQ8N1B3 248 aa17.22■□□□□ 0.35
SHKBP1-225ENST00000600733 PRRC2CQ9Y520 2896 aaKnown RBP17.22■□□□□ 0.35
SHKBP1-225ENST00000600733 RIMS4Q9H426 269 aaPredicted RBP17.21■□□□□ 0.35
SHKBP1-225ENST00000600733 PLK3Q9H4B4 646 aa17.21■□□□□ 0.35
SHKBP1-225ENST00000600733 DLL3Q9NYJ7 618 aa17.21■□□□□ 0.35
SHKBP1-225ENST00000600733 OR1A1Q9P1Q5 309 aa17.21■□□□□ 0.35
SHKBP1-225ENST00000600733 UBE2CO00762 179 aa17.21■□□□□ 0.34
SHKBP1-225ENST00000600733 FBP1P09467 338 aa17.21■□□□□ 0.34
SHKBP1-225ENST00000600733 RPS23P62266 143 aaKnown RBP17.21■□□□□ 0.34
SHKBP1-225ENST00000600733 GNG3P63215 75 aa17.21■□□□□ 0.34
SHKBP1-225ENST00000600733 HLA-DRB3P79483 266 aa17.21■□□□□ 0.34
SHKBP1-225ENST00000600733 DCAF10Q5QP82 559 aa17.21■□□□□ 0.34
SHKBP1-225ENST00000600733 ZNF573Q86YE8 665 aa17.21■□□□□ 0.34
SHKBP1-225ENST00000600733 ZNF295-AS1Q8N0V1 137 aa17.21■□□□□ 0.34
SHKBP1-225ENST00000600733 GTF3AQ92664 365 aaKnown RBP17.21■□□□□ 0.34
SHKBP1-225ENST00000600733 IL22RA2Q969J5 263 aa17.21■□□□□ 0.34
SHKBP1-225ENST00000600733 GPR146Q96CH1 333 aa17.21■□□□□ 0.34
SHKBP1-225ENST00000600733 MMP9P14780 707 aa17.2■□□□□ 0.34
SHKBP1-225ENST00000600733 H1FOOQ8IZA3 346 aaPredicted RBP17.2■□□□□ 0.34
SHKBP1-225ENST00000600733 PRR18Q8N4B5 295 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms