RNA–Protein interactions for RNA: ENST00000600286.1

USHBP1-210, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 4

Gene USHBP1, Length 598 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-210ENST00000600286 XRCC3O43542 346 aa13.72□□□□□ -0.21
USHBP1-210ENST00000600286 ORC5O43913 435 aa13.72□□□□□ -0.21
USHBP1-210ENST00000600286 CCL3L1P16619 93 aa13.72□□□□□ -0.21
USHBP1-210ENST00000600286 GNG2P59768 71 aa13.72□□□□□ -0.21
USHBP1-210ENST00000600286 BPIFB3P59826 476 aa13.72□□□□□ -0.21
USHBP1-210ENST00000600286 PNLIPRP3Q17RR3 467 aa13.72□□□□□ -0.21
USHBP1-210ENST00000600286 MOGAT2Q3SYC2 334 aa13.72□□□□□ -0.21
USHBP1-210ENST00000600286 CHRFAM7AQ494W8 412 aa13.72□□□□□ -0.21
USHBP1-210ENST00000600286 PLAC9Q5JTB6 97 aa13.72□□□□□ -0.21
USHBP1-210ENST00000600286 TMEM69Q5SWH9 247 aa13.72□□□□□ -0.21
USHBP1-210ENST00000600286 ZNF554Q86TJ5 538 aa13.72□□□□□ -0.21
USHBP1-210ENST00000600286 OR13D1Q8NGV5 346 aa13.72□□□□□ -0.21
USHBP1-210ENST00000600286 MCFD2Q8NI22 146 aa13.72□□□□□ -0.21
USHBP1-210ENST00000600286 ARL11Q969Q4 196 aa13.72□□□□□ -0.21
USHBP1-210ENST00000600286 UPRTQ96BW1 309 aa13.72□□□□□ -0.21
USHBP1-210ENST00000600286 SLC25A38Q96DW6 304 aa13.72□□□□□ -0.21
USHBP1-210ENST00000600286 DCUN1D5Q9BTE7 237 aa13.72□□□□□ -0.21
USHBP1-210ENST00000600286 C6orf62Q9GZU0 229 aaPredicted RBP13.72□□□□□ -0.21
USHBP1-210ENST00000600286 SIRPDQ9H106 197 aa13.72□□□□□ -0.21
USHBP1-210ENST00000600286 CALYQ9NYX4 217 aa13.72□□□□□ -0.21
USHBP1-210ENST00000600286 MEX3AA1L020 520 aaKnown RBP13.71□□□□□ -0.21
USHBP1-210ENST00000600286 HPGDSO60760 199 aa13.71□□□□□ -0.21
USHBP1-210ENST00000600286 CLPXO76031 633 aa13.71□□□□□ -0.21
USHBP1-210ENST00000600286 CDK2P24941 298 aa13.71□□□□□ -0.21
USHBP1-210ENST00000600286 HEPN1Q6WQI6 88 aa13.71□□□□□ -0.21
USHBP1-210ENST00000600286 GAPTQ8N292 157 aa13.71□□□□□ -0.21
USHBP1-210ENST00000600286 OR10A7Q8NGE5 316 aa13.71□□□□□ -0.21
USHBP1-210ENST00000600286 OR13A1Q8NGR1 328 aa13.71□□□□□ -0.21
USHBP1-210ENST00000600286 C15orf40Q8WUR7 153 aa13.71□□□□□ -0.21
USHBP1-210ENST00000600286 DYRK2Q92630 601 aa13.71□□□□□ -0.21
USHBP1-210ENST00000600286 LHX4Q969G2 390 aa13.71□□□□□ -0.21
USHBP1-210ENST00000600286 UNKLQ9H9P5 680 aaKnown RBP13.71□□□□□ -0.21
USHBP1-210ENST00000600286 ZMAT3Q9HA38 289 aaKnown RBP13.71□□□□□ -0.21
USHBP1-210ENST00000600286 SIRT7Q9NRC8 400 aa13.71□□□□□ -0.21
USHBP1-210ENST00000600286 SESN1Q9Y6P5 492 aa13.71□□□□□ -0.21
USHBP1-210ENST00000600286 INAFM1C9JVW0 142 aa13.7□□□□□ -0.22
USHBP1-210ENST00000600286 MFNGO00587 321 aa13.7□□□□□ -0.22
USHBP1-210ENST00000600286 IGHV1-8P0DP01 117 aa13.7□□□□□ -0.22
USHBP1-210ENST00000600286 MMP9P14780 707 aa13.7□□□□□ -0.22
USHBP1-210ENST00000600286 FPR2P25090 351 aa13.7□□□□□ -0.22
USHBP1-210ENST00000600286 S100A5P33763 92 aa13.7□□□□□ -0.22
USHBP1-210ENST00000600286 TMEM30BQ3MIR4 351 aa13.7□□□□□ -0.22
USHBP1-210ENST00000600286 HACD4Q5VWC8 232 aa13.7□□□□□ -0.22
USHBP1-210ENST00000600286 Q8N7P7 452 aa13.7□□□□□ -0.22
USHBP1-210ENST00000600286 MRPL30Q8TCC3 161 aaKnown RBP13.7□□□□□ -0.22
USHBP1-210ENST00000600286 TBX15Q96SF7 602 aa13.7□□□□□ -0.22
USHBP1-210ENST00000600286 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.7□□□□□ -0.22
USHBP1-210ENST00000600286 IDI2-AS1Q9NZ38 188 aa13.7□□□□□ -0.22
USHBP1-210ENST00000600286 NUP50Q9UKX7 468 aa13.7□□□□□ -0.22
USHBP1-210ENST00000600286 MRPS7Q9Y2R9 242 aaKnown RBP13.7□□□□□ -0.22
USHBP1-210ENST00000600286 WNK2Q9Y3S1 2297 aa13.69□□□□□ -0.22
USHBP1-210ENST00000600286 TRBV6-6A0A0A6YYG2 114 aa13.69□□□□□ -0.22
USHBP1-210ENST00000600286 NAPSAO96009 420 aa13.69□□□□□ -0.22
USHBP1-210ENST00000600286 SRD5A1P18405 259 aa13.69□□□□□ -0.22
USHBP1-210ENST00000600286 ELK1P19419 428 aa13.69□□□□□ -0.22
USHBP1-210ENST00000600286 NFYBP25208 207 aa13.69□□□□□ -0.22
USHBP1-210ENST00000600286 DLX6P56179 175 aa13.69□□□□□ -0.22
USHBP1-210ENST00000600286 LGALS4P56470 323 aa13.69□□□□□ -0.22
USHBP1-210ENST00000600286 ZNF260Q3ZCT1 412 aa13.69□□□□□ -0.22
USHBP1-210ENST00000600286 PRR18Q8N4B5 295 aa13.69□□□□□ -0.22
USHBP1-210ENST00000600286 RFESDQ8TAC1 157 aa13.69□□□□□ -0.22
USHBP1-210ENST00000600286 GALMQ96C23 342 aa13.69□□□□□ -0.22
USHBP1-210ENST00000600286 MS4A7Q9GZW8 240 aaPredicted RBP13.69□□□□□ -0.22
USHBP1-210ENST00000600286 MMP27Q9H306 513 aa13.69□□□□□ -0.22
USHBP1-210ENST00000600286 TAF9BQ9HBM6 251 aa13.69□□□□□ -0.22
USHBP1-210ENST00000600286 MBNL3Q9NUK0 354 aaKnown RBP13.69□□□□□ -0.22
USHBP1-210ENST00000600286 RABL2AQ9UBK7 228 aaPredicted RBP13.69□□□□□ -0.22
USHBP1-210ENST00000600286 RABL2BQ9UNT1 228 aa13.69□□□□□ -0.22
USHBP1-210ENST00000600286 ARHGAP32A7KAX9 2087 aa13.68□□□□□ -0.22
USHBP1-210ENST00000600286 TRAV39A0A0B4J263 110 aa13.68□□□□□ -0.22
USHBP1-210ENST00000600286 TRAV40A0A0B4J280 105 aa13.68□□□□□ -0.22
USHBP1-210ENST00000600286 TOR1AO14656 332 aa13.68□□□□□ -0.22
USHBP1-210ENST00000600286 AVPP01185 164 aa13.68□□□□□ -0.22
USHBP1-210ENST00000600286 EIF4EP06730 217 aaKnown RBP13.68□□□□□ -0.22
USHBP1-210ENST00000600286 RCC1P18754 421 aaPredicted RBP13.68□□□□□ -0.22
USHBP1-210ENST00000600286 DTYMKP23919 212 aa13.68□□□□□ -0.22
USHBP1-210ENST00000600286 KIR2DS4P43632 304 aa13.68□□□□□ -0.22
USHBP1-210ENST00000600286 CBX5P45973 191 aa13.68□□□□□ -0.22
USHBP1-210ENST00000600286 UBE2E1P51965 193 aa13.68□□□□□ -0.22
USHBP1-210ENST00000600286 PRRX1P54821 245 aa13.68□□□□□ -0.22
USHBP1-210ENST00000600286 KIR2DS1Q14954 304 aa13.68□□□□□ -0.22
USHBP1-210ENST00000600286 C17orf58Q2M2W7 97 aa13.68□□□□□ -0.22
USHBP1-210ENST00000600286 PRAMEF5Q5TYX0 476 aa13.68□□□□□ -0.22
USHBP1-210ENST00000600286 BAIAP2L2Q6UXY1 529 aa13.68□□□□□ -0.22
USHBP1-210ENST00000600286 ZNF782Q6ZMW2 699 aaPredicted RBP13.68□□□□□ -0.22
USHBP1-210ENST00000600286 TCF23Q7RTU1 214 aa13.68□□□□□ -0.22
USHBP1-210ENST00000600286 RTN4RL2Q86UN3 420 aa13.68□□□□□ -0.22
USHBP1-210ENST00000600286 PRIMA1Q86XR5 153 aa13.68□□□□□ -0.22
USHBP1-210ENST00000600286 SLIRPQ9GZT3 109 aaKnown RBP13.68□□□□□ -0.22
USHBP1-210ENST00000600286 TMEM133Q9H2Q1 129 aa13.68□□□□□ -0.22
USHBP1-210ENST00000600286 AUNIPQ9H7T9 357 aa13.68□□□□□ -0.22
USHBP1-210ENST00000600286 LINC00574Q9H8X3 128 aa13.68□□□□□ -0.22
USHBP1-210ENST00000600286 A3GALT2U3KPV4 340 aa13.68□□□□□ -0.22
USHBP1-210ENST00000600286 TMEM235A6NFC5 223 aa13.67□□□□□ -0.22
USHBP1-210ENST00000600286 NPIPB11E5RHQ5 1161 aa13.67□□□□□ -0.22
USHBP1-210ENST00000600286 CTDSP2O14595 271 aa13.67□□□□□ -0.22
USHBP1-210ENST00000600286 RGS11O94810 467 aa13.67□□□□□ -0.22
USHBP1-210ENST00000600286 TPPPO94811 219 aa13.67□□□□□ -0.22
USHBP1-210ENST00000600286 HBZP02008 142 aa13.67□□□□□ -0.22
USHBP1-210ENST00000600286 CGB3P0DN86 165 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms