RNA–Protein interactions for RNA: ENST00000600031.1

VRK3-218, Transcript of vaccinia related kinase 3, humanhuman

Gene VRK3, Length 2,110 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-218ENST00000600031 PLAUP00749 431 aa12.82□□□□□ -0.36
VRK3-218ENST00000600031 CD3EP07766 207 aa12.82□□□□□ -0.36
VRK3-218ENST00000600031 AMY2BP19961 511 aa12.82□□□□□ -0.36
VRK3-218ENST00000600031 TAS2R46P59540 309 aa12.82□□□□□ -0.36
VRK3-218ENST00000600031 PRSS54Q6PEW0 395 aa12.82□□□□□ -0.36
VRK3-218ENST00000600031 BRICD5Q6PL45 260 aa12.82□□□□□ -0.36
VRK3-218ENST00000600031 CLEC18BQ6UXF7 455 aa12.82□□□□□ -0.36
VRK3-218ENST00000600031 ZNF826PQ6ZT77 177 aa12.82□□□□□ -0.36
VRK3-218ENST00000600031 ZNF843Q8N446 348 aa12.82□□□□□ -0.36
VRK3-218ENST00000600031 ZNF808Q8N4W9 903 aaPredicted RBP12.82□□□□□ -0.36
VRK3-218ENST00000600031 CLRN3Q8NCR9 226 aa12.82□□□□□ -0.36
VRK3-218ENST00000600031 PLEKHJ1Q9NW61 149 aa12.82□□□□□ -0.36
VRK3-218ENST00000600031 POLDIP2Q9Y2S7 368 aa12.82□□□□□ -0.36
VRK3-218ENST00000600031 E7EQL1 145 aa12.82□□□□□ -0.36
VRK3-218ENST00000600031 SPRY3O43610 288 aa12.82□□□□□ -0.36
VRK3-218ENST00000600031 PRKACAP17612 351 aa12.82□□□□□ -0.36
VRK3-218ENST00000600031 AGAP20933 346 aa12.82□□□□□ -0.36
VRK3-218ENST00000600031 CHATP28329 748 aa12.82□□□□□ -0.36
VRK3-218ENST00000600031 DUSP1P28562 367 aa12.82□□□□□ -0.36
VRK3-218ENST00000600031 RBMXP38159 391 aaKnown RBP12.82□□□□□ -0.36
VRK3-218ENST00000600031 NPY4RP50391 375 aa12.82□□□□□ -0.36
VRK3-218ENST00000600031 SPRNQ5BIV9 151 aa12.82□□□□□ -0.36
VRK3-218ENST00000600031 NARS2Q96I59 477 aaKnown RBP12.82□□□□□ -0.36
VRK3-218ENST00000600031 TLNRD1Q9H1K6 362 aa12.82□□□□□ -0.36
VRK3-218ENST00000600031 PLK3Q9H4B4 646 aa12.82□□□□□ -0.36
VRK3-218ENST00000600031 UFSP2Q9NUQ7 469 aa12.82□□□□□ -0.36
VRK3-218ENST00000600031 CHD3Q12873 2000 aaKnown RBP12.81□□□□□ -0.36
VRK3-218ENST00000600031 TMEM218A2RU14 115 aa12.81□□□□□ -0.36
VRK3-218ENST00000600031 CA11O75493 328 aa12.81□□□□□ -0.36
VRK3-218ENST00000600031 C1QL1O75973 258 aa12.81□□□□□ -0.36
VRK3-218ENST00000600031 OR7C1O76099 320 aaPredicted RBP12.81□□□□□ -0.36
VRK3-218ENST00000600031 ATG12O94817 140 aa12.81□□□□□ -0.36
VRK3-218ENST00000600031 PGA5P0DJD9 388 aa12.81□□□□□ -0.36
VRK3-218ENST00000600031 ERVK11-1P61568 191 aa12.81□□□□□ -0.36
VRK3-218ENST00000600031 SURF2Q15527 256 aaPredicted RBP12.81□□□□□ -0.36
VRK3-218ENST00000600031 FAM58AQ8N1B3 248 aa12.81□□□□□ -0.36
VRK3-218ENST00000600031 EMG1Q92979 244 aaKnown RBP12.81□□□□□ -0.36
VRK3-218ENST00000600031 ARL11Q969Q4 196 aa12.81□□□□□ -0.36
VRK3-218ENST00000600031 RTBDNQ9BSG5 229 aaPredicted RBP12.81□□□□□ -0.36
VRK3-218ENST00000600031 FAAP24Q9BTP7 215 aa12.81□□□□□ -0.36
VRK3-218ENST00000600031 HSF4Q9ULV5 492 aa12.81□□□□□ -0.36
VRK3-218ENST00000600031 A6NLC8 198 aa12.8□□□□□ -0.36
VRK3-218ENST00000600031 PET100P0DJ07 73 aa12.8□□□□□ -0.36
VRK3-218ENST00000600031 CD200P41217 278 aa12.8□□□□□ -0.36
VRK3-218ENST00000600031 HOXA4Q00056 320 aaPredicted RBP12.8□□□□□ -0.36
VRK3-218ENST00000600031 SLC9A3R2Q15599 337 aa12.8□□□□□ -0.36
VRK3-218ENST00000600031 C2orf50Q96LR7 162 aa12.8□□□□□ -0.36
VRK3-218ENST00000600031 NRIP2Q9BQI9 281 aa12.8□□□□□ -0.36
VRK3-218ENST00000600031 SULT4A1Q9BR01 284 aa12.8□□□□□ -0.36
VRK3-218ENST00000600031 CYTL1Q9NRR1 136 aa12.8□□□□□ -0.36
VRK3-218ENST00000600031 DNAJB11Q9UBS4 358 aa12.8□□□□□ -0.36
VRK3-218ENST00000600031 SERPINE3A8MV23 424 aa12.8□□□□□ -0.36
VRK3-218ENST00000600031 DEFB108AA8MXU0 73 aa12.8□□□□□ -0.36
VRK3-218ENST00000600031 H0YIZ8 118 aa12.8□□□□□ -0.36
VRK3-218ENST00000600031 MZT1Q08AG7 82 aa12.8□□□□□ -0.36
VRK3-218ENST00000600031 WDR82Q6UXN9 313 aa12.8□□□□□ -0.36
VRK3-218ENST00000600031 SVBPQ8N300 66 aa12.8□□□□□ -0.36
VRK3-218ENST00000600031 POM121Q96HA1 1249 aa12.8□□□□□ -0.36
VRK3-218ENST00000600031 AQP10Q96PS8 301 aa12.8□□□□□ -0.36
VRK3-218ENST00000600031 OR2V2Q96R30 315 aa12.8□□□□□ -0.36
VRK3-218ENST00000600031 FAM90A10PA6NDY2 464 aa12.79□□□□□ -0.36
VRK3-218ENST00000600031 FAM90A18PA6NE21 464 aa12.79□□□□□ -0.36
VRK3-218ENST00000600031 FAM90A16PA6NEW6 464 aa12.79□□□□□ -0.36
VRK3-218ENST00000600031 FAM90A20PA6NIJ5 464 aa12.79□□□□□ -0.36
VRK3-218ENST00000600031 FAM90A8PA6NJQ4 464 aa12.79□□□□□ -0.36
VRK3-218ENST00000600031 FAM90A7PA6NKC0 464 aa12.79□□□□□ -0.36
VRK3-218ENST00000600031 FAM90A22PA8MWA6 464 aa12.79□□□□□ -0.36
VRK3-218ENST00000600031 FAM90A12PA8MX19 464 aa12.79□□□□□ -0.36
VRK3-218ENST00000600031 FAM90A5PA8MXJ8 464 aa12.79□□□□□ -0.36
VRK3-218ENST00000600031 FAM90A23PA8MXZ1 464 aa12.79□□□□□ -0.36
VRK3-218ENST00000600031 PDCD6O75340 191 aa12.79□□□□□ -0.36
VRK3-218ENST00000600031 PTBP3O95758 552 aaKnown RBP12.79□□□□□ -0.36
VRK3-218ENST00000600031 IGHV1-46P01743 117 aa12.79□□□□□ -0.36
VRK3-218ENST00000600031 ACAA1P09110 424 aaPredicted RBP12.79□□□□□ -0.36
VRK3-218ENST00000600031 FAM90A15PP0C7V4 464 aa12.79□□□□□ -0.36
VRK3-218ENST00000600031 FAM90A13PP0C7W8 464 aa12.79□□□□□ -0.36
VRK3-218ENST00000600031 FAM90A14PP0C7W9 464 aa12.79□□□□□ -0.36
VRK3-218ENST00000600031 FAM90A24PP0C7X0 464 aa12.79□□□□□ -0.36
VRK3-218ENST00000600031 LOXP28300 417 aaPredicted RBP12.79□□□□□ -0.36
VRK3-218ENST00000600031 ECI1P42126 302 aa12.79□□□□□ -0.36
VRK3-218ENST00000600031 EIF5AP63241 154 aaKnown RBP12.79□□□□□ -0.36
VRK3-218ENST00000600031 SUPT4H1P63272 117 aaKnown RBP12.79□□□□□ -0.36
VRK3-218ENST00000600031 AADACL3Q5VUY0 350 aa12.79□□□□□ -0.36
VRK3-218ENST00000600031 POC1AQ8NBT0 407 aa12.79□□□□□ -0.36
VRK3-218ENST00000600031 DYRK2Q92630 601 aa12.79□□□□□ -0.36
VRK3-218ENST00000600031 MEGF10Q96KG7 1140 aa12.79□□□□□ -0.36
VRK3-218ENST00000600031 TSNAXQ99598 290 aaKnown RBP12.79□□□□□ -0.36
VRK3-218ENST00000600031 HDHD3Q9BSH5 251 aaPredicted RBP12.79□□□□□ -0.36
VRK3-218ENST00000600031 ST6GALNAC5Q9BVH7 336 aa12.79□□□□□ -0.36
VRK3-218ENST00000600031 METTL8Q9H825 291 aaKnown RBP12.79□□□□□ -0.36
VRK3-218ENST00000600031 AK3Q9UIJ7 227 aa12.79□□□□□ -0.36
VRK3-218ENST00000600031 RNF115Q9Y4L5 304 aa12.79□□□□□ -0.36
VRK3-218ENST00000600031 WNT9BO14905 357 aa12.79□□□□□ -0.36
VRK3-218ENST00000600031 ADAP1O75689 374 aa12.79□□□□□ -0.36
VRK3-218ENST00000600031 FUT3P21217 361 aa12.79□□□□□ -0.36
VRK3-218ENST00000600031 Q8IYB0 196 aa12.79□□□□□ -0.36
VRK3-218ENST00000600031 LILRB1Q8NHL6 650 aaPredicted RBP12.79□□□□□ -0.36
VRK3-218ENST00000600031 RRNAD1Q96FB5 475 aaKnown RBP12.79□□□□□ -0.36
VRK3-218ENST00000600031 RHOFQ9HBH0 211 aa12.79□□□□□ -0.36
VRK3-218ENST00000600031 C1orf123Q9NWV4 160 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms