RNA–Protein interactions for RNA: ENST00000598907.5

SHKBP1-218, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-218ENST00000598907 ELK1P19419 428 aa11.3□□□□□ -0.6
SHKBP1-218ENST00000598907 CPT2P23786 658 aa11.3□□□□□ -0.6
SHKBP1-218ENST00000598907 GMFBP60983 142 aa11.3□□□□□ -0.6
SHKBP1-218ENST00000598907 MICBQ29980 383 aa11.3□□□□□ -0.6
SHKBP1-218ENST00000598907 METTL11BQ5VVY1 283 aa11.3□□□□□ -0.6
SHKBP1-218ENST00000598907 SFRP4Q6FHJ7 346 aaPredicted RBP11.3□□□□□ -0.6
SHKBP1-218ENST00000598907 SIGIRRQ6IA17 410 aa11.3□□□□□ -0.6
SHKBP1-218ENST00000598907 LINC00299Q6ZSB3 139 aa11.3□□□□□ -0.6
SHKBP1-218ENST00000598907 CMTM4Q8IZR5 234 aa11.3□□□□□ -0.6
SHKBP1-218ENST00000598907 CD177Q8N6Q3 437 aa11.3□□□□□ -0.6
SHKBP1-218ENST00000598907 OR6Q1Q8NGQ2 317 aa11.3□□□□□ -0.6
SHKBP1-218ENST00000598907 WDFY2Q96P53 400 aa11.3□□□□□ -0.6
SHKBP1-218ENST00000598907 C6orf62Q9GZU0 229 aaPredicted RBP11.3□□□□□ -0.6
SHKBP1-218ENST00000598907 DNAJB11Q9UBS4 358 aa11.3□□□□□ -0.6
SHKBP1-218ENST00000598907 PEX16Q9Y5Y5 336 aa11.3□□□□□ -0.6
SHKBP1-218ENST00000598907 U3KQK5 164 aa11.3□□□□□ -0.6
SHKBP1-218ENST00000598907 IGHV3OR15-7A0A075B7D8 119 aa11.29□□□□□ -0.6
SHKBP1-218ENST00000598907 A0A0A6YYH2 397 aa11.29□□□□□ -0.6
SHKBP1-218ENST00000598907 METTL21EPA6NDL7 271 aa11.29□□□□□ -0.6
SHKBP1-218ENST00000598907 A6NJ64 397 aa11.29□□□□□ -0.6
SHKBP1-218ENST00000598907 DUSP1P28562 367 aa11.29□□□□□ -0.6
SHKBP1-218ENST00000598907 PRDX2P32119 198 aa11.29□□□□□ -0.6
SHKBP1-218ENST00000598907 TMEM50BP56557 158 aa11.29□□□□□ -0.6
SHKBP1-218ENST00000598907 KRTAP10-11P60412 298 aa11.29□□□□□ -0.6
SHKBP1-218ENST00000598907 MOGAT2Q3SYC2 334 aa11.29□□□□□ -0.6
SHKBP1-218ENST00000598907 ZNF788Q6ZQV5 615 aa11.29□□□□□ -0.6
SHKBP1-218ENST00000598907 LAX1Q8IWV1 398 aa11.29□□□□□ -0.6
SHKBP1-218ENST00000598907 PIP4P2Q8N4L2 257 aa11.29□□□□□ -0.6
SHKBP1-218ENST00000598907 OR4F17Q8NGA8 305 aa11.29□□□□□ -0.6
SHKBP1-218ENST00000598907 OR5T2Q8NGG2 359 aa11.29□□□□□ -0.6
SHKBP1-218ENST00000598907 SDSLQ96GA7 329 aa11.29□□□□□ -0.6
SHKBP1-218ENST00000598907 OR4F4Q96R69 305 aa11.29□□□□□ -0.6
SHKBP1-218ENST00000598907 DNTTIP1Q9H147 329 aa11.29□□□□□ -0.6
SHKBP1-218ENST00000598907 ATG5Q9H1Y0 275 aa11.29□□□□□ -0.6
SHKBP1-218ENST00000598907 ZNF581Q9P0T4 197 aa11.29□□□□□ -0.6
SHKBP1-218ENST00000598907 ZNRD1Q9P1U0 126 aa11.29□□□□□ -0.6
SHKBP1-218ENST00000598907 RCC2Q9P258 522 aaKnown RBP11.29□□□□□ -0.6
SHKBP1-218ENST00000598907 KAAG1Q9UBP8 84 aa11.29□□□□□ -0.6
SHKBP1-218ENST00000598907 SH2D1BO14796 132 aa11.28□□□□□ -0.6
SHKBP1-218ENST00000598907 SOCS1O15524 211 aa11.28□□□□□ -0.6
SHKBP1-218ENST00000598907 RGS5O15539 181 aa11.28□□□□□ -0.6
SHKBP1-218ENST00000598907 NDUFA2O43678 99 aa11.28□□□□□ -0.6
SHKBP1-218ENST00000598907 FBXO24O75426 580 aa11.28□□□□□ -0.6
SHKBP1-218ENST00000598907 SCGNO76038 276 aa11.28□□□□□ -0.6
SHKBP1-218ENST00000598907 OR2H2O95918 312 aa11.28□□□□□ -0.6
SHKBP1-218ENST00000598907 HAND1O96004 215 aa11.28□□□□□ -0.6
SHKBP1-218ENST00000598907 FBP1P09467 338 aa11.28□□□□□ -0.6
SHKBP1-218ENST00000598907 CHATP28329 748 aa11.28□□□□□ -0.6
SHKBP1-218ENST00000598907 TNFSF8P32971 234 aa11.28□□□□□ -0.6
SHKBP1-218ENST00000598907 CEBPDP49716 269 aaPredicted RBP11.28□□□□□ -0.6
SHKBP1-218ENST00000598907 VEGFCP49767 419 aa11.28□□□□□ -0.6
SHKBP1-218ENST00000598907 SNU13P55769 128 aaKnown RBP11.28□□□□□ -0.6
SHKBP1-218ENST00000598907 RAB12Q6IQ22 244 aa11.28□□□□□ -0.6
SHKBP1-218ENST00000598907 METAP1DQ6UB28 335 aaPredicted RBP11.28□□□□□ -0.6
SHKBP1-218ENST00000598907 CHST4Q8NCG5 386 aa11.28□□□□□ -0.6
SHKBP1-218ENST00000598907 OR56B1Q8NGI3 324 aa11.28□□□□□ -0.6
SHKBP1-218ENST00000598907 OR4C13Q8NGP0 309 aa11.28□□□□□ -0.6
SHKBP1-218ENST00000598907 OR10R2Q8NGX6 335 aa11.28□□□□□ -0.6
SHKBP1-218ENST00000598907 S100A16Q96FQ6 103 aaKnown RBP11.28□□□□□ -0.6
SHKBP1-218ENST00000598907 GAFA1Q96PS6 74 aa11.28□□□□□ -0.6
SHKBP1-218ENST00000598907 SOSTQ9BQB4 213 aa11.28□□□□□ -0.6
SHKBP1-218ENST00000598907 GLS2Q9UI32 602 aa11.28□□□□□ -0.6
SHKBP1-218ENST00000598907 HSF4Q9ULV5 492 aa11.28□□□□□ -0.6
SHKBP1-218ENST00000598907 MAB21L2Q9Y586 359 aa11.28□□□□□ -0.6
SHKBP1-218ENST00000598907 TRAV24A0A0B4J272 114 aa11.27□□□□□ -0.61
SHKBP1-218ENST00000598907 A0A1W2PRD5 423 aa11.27□□□□□ -0.61
SHKBP1-218ENST00000598907 A0A1W2PRF3 423 aa11.27□□□□□ -0.61
SHKBP1-218ENST00000598907 A0A1W2PRM7 423 aa11.27□□□□□ -0.61
SHKBP1-218ENST00000598907 H3BUI4 141 aa11.27□□□□□ -0.61
SHKBP1-218ENST00000598907 SLC33A1O00400 549 aaPredicted RBP11.27□□□□□ -0.61
SHKBP1-218ENST00000598907 DEGS1O15121 323 aa11.27□□□□□ -0.61
SHKBP1-218ENST00000598907 XRCC3O43542 346 aa11.27□□□□□ -0.61
SHKBP1-218ENST00000598907 ZNF737O75373 536 aa11.27□□□□□ -0.61
SHKBP1-218ENST00000598907 OR7C1O76099 320 aaPredicted RBP11.27□□□□□ -0.61
SHKBP1-218ENST00000598907 TPPPO94811 219 aa11.27□□□□□ -0.61
SHKBP1-218ENST00000598907 GYPAP02724 150 aa11.27□□□□□ -0.61
SHKBP1-218ENST00000598907 TFF1P04155 84 aa11.27□□□□□ -0.61
SHKBP1-218ENST00000598907 GLAP06280 429 aa11.27□□□□□ -0.61
SHKBP1-218ENST00000598907 CD28P10747 220 aa11.27□□□□□ -0.61
SHKBP1-218ENST00000598907 FUT3P21217 361 aa11.27□□□□□ -0.61
SHKBP1-218ENST00000598907 GABRR1P24046 479 aa11.27□□□□□ -0.61
SHKBP1-218ENST00000598907 CDK2P24941 298 aa11.27□□□□□ -0.61
SHKBP1-218ENST00000598907 BLVRBP30043 206 aaPredicted RBP11.27□□□□□ -0.61
SHKBP1-218ENST00000598907 MNDAP41218 407 aa11.27□□□□□ -0.61
SHKBP1-218ENST00000598907 PRB3Q04118 309 aaPredicted RBP11.27□□□□□ -0.61
SHKBP1-218ENST00000598907 KCNJ8Q15842 424 aa11.27□□□□□ -0.61
SHKBP1-218ENST00000598907 PLAC9Q5JTB6 97 aa11.27□□□□□ -0.61
SHKBP1-218ENST00000598907 CASC10Q5T4H9 136 aa11.27□□□□□ -0.61
SHKBP1-218ENST00000598907 DCDC5Q6ZRR9 648 aa11.27□□□□□ -0.61
SHKBP1-218ENST00000598907 CCDC190Q86UF4 302 aa11.27□□□□□ -0.61
SHKBP1-218ENST00000598907 OR4M1Q8NGD0 313 aa11.27□□□□□ -0.61
SHKBP1-218ENST00000598907 OR2T6Q8NHC8 308 aa11.27□□□□□ -0.61
SHKBP1-218ENST00000598907 PPP1R35Q8TAP8 253 aa11.27□□□□□ -0.61
SHKBP1-218ENST00000598907 SIRPDQ9H106 197 aa11.27□□□□□ -0.61
SHKBP1-218ENST00000598907 SPACA1Q9HBV2 294 aa11.27□□□□□ -0.61
SHKBP1-218ENST00000598907 OR14J1Q9UGF5 321 aa11.27□□□□□ -0.61
SHKBP1-218ENST00000598907 LCE6AA0A183 80 aa11.26□□□□□ -0.61
SHKBP1-218ENST00000598907 TMEM82A0PJX8 343 aa11.26□□□□□ -0.61
SHKBP1-218ENST00000598907 RNASEK-C17orf49H0YIS7 233 aa11.26□□□□□ -0.61
SHKBP1-218ENST00000598907 SIGLEC5O15389 551 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms