RNA–Protein interactions for RNA: ENST00000594973.5

SHKBP1-205, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-205ENST00000594973 WDYHV1Q96HA8 205 aa14.68□□□□□ -0.06
SHKBP1-205ENST00000594973 GSKIPQ9P0R6 139 aa14.68□□□□□ -0.06
SHKBP1-205ENST00000594973 PRSS50Q9UI38 385 aa14.68□□□□□ -0.06
SHKBP1-205ENST00000594973 FBXO7Q9Y3I1 522 aa14.68□□□□□ -0.06
SHKBP1-205ENST00000594973 BORCS7-ASMTA0A0B4J1R7 106 aa14.67□□□□□ -0.06
SHKBP1-205ENST00000594973 hCG_38984A0A1B0GV85 526 aa14.67□□□□□ -0.06
SHKBP1-205ENST00000594973 SOX8P57073 446 aa14.67□□□□□ -0.06
SHKBP1-205ENST00000594973 CNN3Q15417 329 aaKnown RBP14.67□□□□□ -0.06
SHKBP1-205ENST00000594973 FAM189A2Q15884 450 aa14.67□□□□□ -0.06
SHKBP1-205ENST00000594973 FAM219AQ8IW50 185 aa14.67□□□□□ -0.06
SHKBP1-205ENST00000594973 FAM89BQ8N5H3 189 aa14.67□□□□□ -0.06
SHKBP1-205ENST00000594973 PIGCQ92535 297 aa14.67□□□□□ -0.06
SHKBP1-205ENST00000594973 BORCS8Q96FH0 119 aa14.67□□□□□ -0.06
SHKBP1-205ENST00000594973 ST6GALNAC5Q9BVH7 336 aa14.67□□□□□ -0.06
SHKBP1-205ENST00000594973 MUC6Q6W4X9 2439 aa14.67□□□□□ -0.06
SHKBP1-205ENST00000594973 MARCH11A6NNE9 402 aa14.67□□□□□ -0.06
SHKBP1-205ENST00000594973 DEDDO75618 318 aa14.67□□□□□ -0.06
SHKBP1-205ENST00000594973 GGNBP1Q5YKI7 109 aa14.67□□□□□ -0.06
SHKBP1-205ENST00000594973 CA5BP1Q8WTZ4 195 aa14.67□□□□□ -0.06
SHKBP1-205ENST00000594973 R3HDM4Q96D70 268 aa14.67□□□□□ -0.06
SHKBP1-205ENST00000594973 PRRX2Q99811 253 aa14.67□□□□□ -0.06
SHKBP1-205ENST00000594973 ACTR3CQ9C0K3 210 aaPredicted RBP14.67□□□□□ -0.06
SHKBP1-205ENST00000594973 SLC25A31Q9H0C2 315 aa14.67□□□□□ -0.06
SHKBP1-205ENST00000594973 DSPP15924 2871 aaKnown RBP14.67□□□□□ -0.06
SHKBP1-205ENST00000594973 AKAP13Q12802 2813 aa14.67□□□□□ -0.06
SHKBP1-205ENST00000594973 SLC22A20A6NK97 555 aa14.66□□□□□ -0.06
SHKBP1-205ENST00000594973 TAGLN2P37802 199 aaKnown RBP14.66□□□□□ -0.06
SHKBP1-205ENST00000594973 PRSS33Q8NF86 280 aa14.66□□□□□ -0.06
SHKBP1-205ENST00000594973 RTBDNQ9BSG5 229 aaPredicted RBP14.66□□□□□ -0.06
SHKBP1-205ENST00000594973 C1QTNF5Q9BXJ0 243 aa14.66□□□□□ -0.06
SHKBP1-205ENST00000594973 PARP12Q9H0J9 701 aaKnown RBP14.66□□□□□ -0.06
SHKBP1-205ENST00000594973 ZDHHC11Q9H8X9 412 aa14.66□□□□□ -0.06
SHKBP1-205ENST00000594973 ZNF391Q9UJN7 358 aa14.66□□□□□ -0.06
SHKBP1-205ENST00000594973 PRR33A8MZF0 331 aa14.66□□□□□ -0.06
SHKBP1-205ENST00000594973 H3BQ15 152 aa14.66□□□□□ -0.06
SHKBP1-205ENST00000594973 MBP02144 154 aa14.66□□□□□ -0.06
SHKBP1-205ENST00000594973 TRGC2P03986 189 aa14.66□□□□□ -0.06
SHKBP1-205ENST00000594973 PDZD11Q5EBL8 140 aa14.66□□□□□ -0.06
SHKBP1-205ENST00000594973 PLCXD3Q63HM9 321 aa14.66□□□□□ -0.06
SHKBP1-205ENST00000594973 C6orf201Q7Z4U5 140 aa14.66□□□□□ -0.06
SHKBP1-205ENST00000594973 RAB39BQ96DA2 213 aa14.66□□□□□ -0.06
SHKBP1-205ENST00000594973 RCC1LQ96I51 464 aaKnown RBP14.66□□□□□ -0.06
SHKBP1-205ENST00000594973 HIST1H2BLQ99880 126 aa14.66□□□□□ -0.06
SHKBP1-205ENST00000594973 PECRQ9BY49 303 aa14.66□□□□□ -0.06
SHKBP1-205ENST00000594973 GVINP1Q7Z2Y8 2422 aa14.66□□□□□ -0.06
SHKBP1-205ENST00000594973 NPY4RP50391 375 aa14.65□□□□□ -0.06
SHKBP1-205ENST00000594973 PRDM14Q9GZV8 571 aa14.65□□□□□ -0.06
SHKBP1-205ENST00000594973 TUBD1Q9UJT1 453 aa14.65□□□□□ -0.06
SHKBP1-205ENST00000594973 FOXI3A8MTJ6 420 aaPredicted RBP14.65□□□□□ -0.06
SHKBP1-205ENST00000594973 PHOX2AO14813 284 aa14.65□□□□□ -0.06
SHKBP1-205ENST00000594973 XRCC2O43543 280 aa14.65□□□□□ -0.06
SHKBP1-205ENST00000594973 WISP2O76076 250 aa14.65□□□□□ -0.06
SHKBP1-205ENST00000594973 SNRPCP09234 159 aaKnown RBP14.65□□□□□ -0.06
SHKBP1-205ENST00000594973 TRGC1P0CF51 173 aa14.65□□□□□ -0.06
SHKBP1-205ENST00000594973 P2RY1P47900 373 aa14.65□□□□□ -0.06
SHKBP1-205ENST00000594973 UBE2KP61086 200 aa14.65□□□□□ -0.06
SHKBP1-205ENST00000594973 DEFB109BQ30KR1 87 aa14.65□□□□□ -0.06
SHKBP1-205ENST00000594973 TMEM42Q69YG0 159 aa14.65□□□□□ -0.06
SHKBP1-205ENST00000594973 ZNF581Q9P0T4 197 aa14.65□□□□□ -0.06
SHKBP1-205ENST00000594973 PITPNC1Q9UKF7 332 aa14.65□□□□□ -0.06
SHKBP1-205ENST00000594973 MGAQ8IWI9 3026 aa14.65□□□□□ -0.06
SHKBP1-205ENST00000594973 CEP250Q9BV73 2442 aa14.65□□□□□ -0.06
SHKBP1-205ENST00000594973 ZNF727A8MUV8 499 aa14.64□□□□□ -0.07
SHKBP1-205ENST00000594973 CYB5BO43169 146 aa14.64□□□□□ -0.07
SHKBP1-205ENST00000594973 RPS2P15880 293 aaKnown RBP14.64□□□□□ -0.07
SHKBP1-205ENST00000594973 AMY2BP19961 511 aa14.64□□□□□ -0.07
SHKBP1-205ENST00000594973 GLIPR1P48060 266 aa14.64□□□□□ -0.07
SHKBP1-205ENST00000594973 ERVFRD-1P60508 538 aa14.64□□□□□ -0.07
SHKBP1-205ENST00000594973 OR8B8Q15620 311 aa14.64□□□□□ -0.07
SHKBP1-205ENST00000594973 TAF9Q16594 264 aa14.64□□□□□ -0.07
SHKBP1-205ENST00000594973 ZNF664Q8N3J9 261 aa14.64□□□□□ -0.07
SHKBP1-205ENST00000594973 HSD17B11Q8NBQ5 300 aa14.64□□□□□ -0.07
SHKBP1-205ENST00000594973 OR8G5Q8NG78 346 aa14.64□□□□□ -0.07
SHKBP1-205ENST00000594973 ABHD5Q8WTS1 349 aa14.64□□□□□ -0.07
SHKBP1-205ENST00000594973 TM2D1Q9BX74 207 aa14.64□□□□□ -0.07
SHKBP1-205ENST00000594973 PLEKHJ1Q9NW61 149 aa14.64□□□□□ -0.07
SHKBP1-205ENST00000594973 SLC7A11Q9UPY5 501 aa14.64□□□□□ -0.07
SHKBP1-205ENST00000594973 ZNF816-ZNF321PA0A0X1KG74 233 aa14.64□□□□□ -0.07
SHKBP1-205ENST00000594973 ZNF850A8MQ14 1090 aa14.64□□□□□ -0.07
SHKBP1-205ENST00000594973 PRH1P02810 166 aa14.64□□□□□ -0.07
SHKBP1-205ENST00000594973 CLN3Q13286 438 aa14.64□□□□□ -0.07
SHKBP1-205ENST00000594973 IAH1Q2TAA2 248 aaPredicted RBP14.64□□□□□ -0.07
SHKBP1-205ENST00000594973 ZNF343Q6P1L6 599 aa14.64□□□□□ -0.07
SHKBP1-205ENST00000594973 LHFPL2Q6ZUX7 228 aa14.64□□□□□ -0.07
SHKBP1-205ENST00000594973 LHFPL1Q86WI0 220 aa14.64□□□□□ -0.07
SHKBP1-205ENST00000594973 BATF2Q8N1L9 274 aa14.64□□□□□ -0.07
SHKBP1-205ENST00000594973 SMIM3Q9BZL3 60 aa14.64□□□□□ -0.07
SHKBP1-205ENST00000594973 C1orf123Q9NWV4 160 aa14.64□□□□□ -0.07
SHKBP1-205ENST00000594973 PRR13Q9NZ81 148 aa14.64□□□□□ -0.07
SHKBP1-205ENST00000594973 TGIF2-C20orf24A0A0A6YYL0 155 aa14.63□□□□□ -0.07
SHKBP1-205ENST00000594973 GZMBP10144 247 aa14.63□□□□□ -0.07
SHKBP1-205ENST00000594973 PCP4P48539 62 aa14.63□□□□□ -0.07
SHKBP1-205ENST00000594973 SNU13P55769 128 aaKnown RBP14.63□□□□□ -0.07
SHKBP1-205ENST00000594973 COLCA1Q6ZS62 124 aa14.63□□□□□ -0.07
SHKBP1-205ENST00000594973 C5orf24Q7Z6I8 188 aa14.63□□□□□ -0.07
SHKBP1-205ENST00000594973 Q96M66 194 aa14.63□□□□□ -0.07
SHKBP1-205ENST00000594973 ZNF701Q9NV72 531 aaPredicted RBP14.63□□□□□ -0.07
SHKBP1-205ENST00000594973 IGKV1-12A0A0C4DH73 117 aa14.63□□□□□ -0.07
SHKBP1-205ENST00000594973 SDCBPO00560 298 aaPredicted RBP14.63□□□□□ -0.07
SHKBP1-205ENST00000594973 IL18BPO95998 194 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms