RNA–Protein interactions for RNA: ENST00000594067.5

LIG1-206, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-206ENST00000594067 DYNLT3P51808 116 aa14.12□□□□□ -0.15
LIG1-206ENST00000594067 FGF12P61328 243 aa14.12□□□□□ -0.15
LIG1-206ENST00000594067 TGIF2-C20orf24A0A0A6YYL0 155 aa14.11□□□□□ -0.15
LIG1-206ENST00000594067 IGKV1-6A0A0C4DH72 117 aa14.11□□□□□ -0.15
LIG1-206ENST00000594067 ZNF503-AS2A6NEH8 195 aa14.11□□□□□ -0.15
LIG1-206ENST00000594067 MRPL21Q7Z2W9 205 aaKnown RBP14.11□□□□□ -0.15
LIG1-206ENST00000594067 ZDHHC23Q8IYP9 409 aa14.11□□□□□ -0.15
LIG1-206ENST00000594067 CALHM2Q9HA72 323 aa14.11□□□□□ -0.15
LIG1-206ENST00000594067 FAM90A10PA6NDY2 464 aa14.11□□□□□ -0.15
LIG1-206ENST00000594067 FAM90A18PA6NE21 464 aa14.11□□□□□ -0.15
LIG1-206ENST00000594067 FAM90A16PA6NEW6 464 aa14.11□□□□□ -0.15
LIG1-206ENST00000594067 FAM90A20PA6NIJ5 464 aa14.11□□□□□ -0.15
LIG1-206ENST00000594067 FAM90A8PA6NJQ4 464 aa14.11□□□□□ -0.15
LIG1-206ENST00000594067 FAM90A7PA6NKC0 464 aa14.11□□□□□ -0.15
LIG1-206ENST00000594067 FAM90A22PA8MWA6 464 aa14.11□□□□□ -0.15
LIG1-206ENST00000594067 FAM90A12PA8MX19 464 aa14.11□□□□□ -0.15
LIG1-206ENST00000594067 FAM90A5PA8MXJ8 464 aa14.11□□□□□ -0.15
LIG1-206ENST00000594067 FAM90A23PA8MXZ1 464 aa14.11□□□□□ -0.15
LIG1-206ENST00000594067 HSPA12AO43301 675 aa14.11□□□□□ -0.15
LIG1-206ENST00000594067 HSPB1P04792 205 aaKnown RBP14.11□□□□□ -0.15
LIG1-206ENST00000594067 CELA3AP09093 270 aa14.11□□□□□ -0.15
LIG1-206ENST00000594067 FAM90A15PP0C7V4 464 aa14.11□□□□□ -0.15
LIG1-206ENST00000594067 FAM90A13PP0C7W8 464 aa14.11□□□□□ -0.15
LIG1-206ENST00000594067 FAM90A14PP0C7W9 464 aa14.11□□□□□ -0.15
LIG1-206ENST00000594067 FAM90A24PP0C7X0 464 aa14.11□□□□□ -0.15
LIG1-206ENST00000594067 EPHA1P21709 976 aa14.11□□□□□ -0.15
LIG1-206ENST00000594067 FOXO1Q12778 655 aa14.11□□□□□ -0.15
LIG1-206ENST00000594067 Q6ZS49 121 aa14.11□□□□□ -0.15
LIG1-206ENST00000594067 TMEM45BQ96B21 275 aa14.11□□□□□ -0.15
LIG1-206ENST00000594067 TVP23CQ96ET8 276 aa14.11□□□□□ -0.15
LIG1-206ENST00000594067 SIGLEC12Q96PQ1 595 aa14.11□□□□□ -0.15
LIG1-206ENST00000594067 SLC25A31Q9H0C2 315 aa14.11□□□□□ -0.15
LIG1-206ENST00000594067 OPA3Q9H6K4 179 aa14.11□□□□□ -0.15
LIG1-206ENST00000594067 WSB1Q9Y6I7 421 aa14.11□□□□□ -0.15
LIG1-206ENST00000594067 CXorf65A6NEN9 183 aa14.1□□□□□ -0.15
LIG1-206ENST00000594067 ATXN7O15265 892 aaPredicted RBP14.1□□□□□ -0.15
LIG1-206ENST00000594067 SYNGR1O43759 233 aa14.1□□□□□ -0.15
LIG1-206ENST00000594067 PDGFBP01127 241 aaPredicted RBP14.1□□□□□ -0.15
LIG1-206ENST00000594067 RUNX1Q01196 453 aa14.1□□□□□ -0.15
LIG1-206ENST00000594067 NMSQ5H8A3 153 aa14.1□□□□□ -0.15
LIG1-206ENST00000594067 ZNF506Q5JVG8 444 aa14.1□□□□□ -0.15
LIG1-206ENST00000594067 TIPARPQ7Z3E1 657 aaKnown RBP14.1□□□□□ -0.15
LIG1-206ENST00000594067 TUSC5Q8IXB3 177 aa14.1□□□□□ -0.15
LIG1-206ENST00000594067 OR10D4PQ8NGN7 298 aa14.1□□□□□ -0.15
LIG1-206ENST00000594067 CT55Q8WUE5 264 aa14.1□□□□□ -0.15
LIG1-206ENST00000594067 ZNF488Q96MN9 340 aa14.1□□□□□ -0.15
LIG1-206ENST00000594067 PRDM13Q9H4Q3 707 aa14.1□□□□□ -0.15
LIG1-206ENST00000594067 PRDM6Q9NQX0 595 aa14.1□□□□□ -0.15
LIG1-206ENST00000594067 TRAPPC2LH3BP13 241 aa14.1□□□□□ -0.15
LIG1-206ENST00000594067 NGFP01138 241 aa14.1□□□□□ -0.15
LIG1-206ENST00000594067 CEACAM21Q3KPI0 293 aa14.1□□□□□ -0.15
LIG1-206ENST00000594067 GFI1BQ5VTD9 330 aa14.1□□□□□ -0.15
LIG1-206ENST00000594067 PLPPR1Q8TBJ4 325 aa14.1□□□□□ -0.15
LIG1-206ENST00000594067 LRFN1Q9P244 771 aa14.1□□□□□ -0.15
LIG1-206ENST00000594067 SEC14L6B5MCN3 397 aa14.09□□□□□ -0.15
LIG1-206ENST00000594067 CHST1O43916 411 aa14.09□□□□□ -0.15
LIG1-206ENST00000594067 TRGC2P03986 189 aa14.09□□□□□ -0.15
LIG1-206ENST00000594067 SOD3P08294 240 aa14.09□□□□□ -0.15
LIG1-206ENST00000594067 UCP1P25874 307 aa14.09□□□□□ -0.15
LIG1-206ENST00000594067 GLIPR1P48060 266 aa14.09□□□□□ -0.15
LIG1-206ENST00000594067 ZNF154Q13106 437 aa14.09□□□□□ -0.15
LIG1-206ENST00000594067 IL22RA1Q8N6P7 574 aa14.09□□□□□ -0.15
LIG1-206ENST00000594067 PSMF1Q92530 271 aa14.09□□□□□ -0.15
LIG1-206ENST00000594067 ZNF552Q9H707 407 aaPredicted RBP14.09□□□□□ -0.15
LIG1-206ENST00000594067 SIRT7Q9NRC8 400 aa14.09□□□□□ -0.15
LIG1-206ENST00000594067 FREM1Q5H8C1 2179 aa14.09□□□□□ -0.15
LIG1-206ENST00000594067 CYB5BO43169 146 aa14.09□□□□□ -0.15
LIG1-206ENST00000594067 TUSC2O75896 110 aa14.09□□□□□ -0.15
LIG1-206ENST00000594067 LY86O95711 162 aa14.09□□□□□ -0.15
LIG1-206ENST00000594067 VDAC1P21796 283 aa14.09□□□□□ -0.15
LIG1-206ENST00000594067 ID3Q02535 119 aa14.09□□□□□ -0.15
LIG1-206ENST00000594067 DCAF12Q5T6F0 453 aa14.09□□□□□ -0.15
LIG1-206ENST00000594067 C20orf204Q6ZNR8 217 aa14.09□□□□□ -0.15
LIG1-206ENST00000594067 CLDND2Q8NHS1 167 aa14.09□□□□□ -0.15
LIG1-206ENST00000594067 NIPSNAP3BQ9BS92 247 aa14.09□□□□□ -0.15
LIG1-206ENST00000594067 GPR61Q9BZJ8 451 aa14.09□□□□□ -0.15
LIG1-206ENST00000594067 SMOC1Q9H4F8 434 aa14.09□□□□□ -0.15
LIG1-206ENST00000594067 MRPS18CQ9Y3D5 142 aaKnown RBP14.09□□□□□ -0.15
LIG1-206ENST00000594067 SERPINA7P05543 415 aa14.08□□□□□ -0.15
LIG1-206ENST00000594067 HIST1H1BP16401 226 aaKnown RBP14.08□□□□□ -0.15
LIG1-206ENST00000594067 DEFA6Q01524 100 aa14.08□□□□□ -0.15
LIG1-206ENST00000594067 MKXQ8IYA7 352 aa14.08□□□□□ -0.15
LIG1-206ENST00000594067 POM121Q96HA1 1249 aa14.08□□□□□ -0.15
LIG1-206ENST00000594067 THOC3Q96J01 351 aaKnown RBP14.08□□□□□ -0.15
LIG1-206ENST00000594067 HES7Q9BYE0 225 aa14.08□□□□□ -0.15
LIG1-206ENST00000594067 ATP23Q9Y6H3 246 aa14.08□□□□□ -0.15
LIG1-206ENST00000594067 KIR2DS1A0A191URI9 304 aa14.08□□□□□ -0.16
LIG1-206ENST00000594067 HS3ST1O14792 307 aa14.08□□□□□ -0.16
LIG1-206ENST00000594067 KIR2DS4P43632 304 aa14.08□□□□□ -0.16
LIG1-206ENST00000594067 KIR2DS1Q14954 304 aa14.08□□□□□ -0.16
LIG1-206ENST00000594067 SLC35E3Q7Z769 313 aa14.08□□□□□ -0.16
LIG1-206ENST00000594067 HIST3H2BBQ8N257 126 aa14.08□□□□□ -0.16
LIG1-206ENST00000594067 RDH5Q92781 318 aa14.08□□□□□ -0.16
LIG1-206ENST00000594067 GNPNAT1Q96EK6 184 aaPredicted RBP14.08□□□□□ -0.16
LIG1-206ENST00000594067 HIPK2Q9H2X6 1198 aa14.08□□□□□ -0.16
LIG1-206ENST00000594067 BOKQ9UMX3 212 aaPredicted RBP14.08□□□□□ -0.16
LIG1-206ENST00000594067 TNRC6BQ9UPQ9 1833 aaKnown RBP14.08□□□□□ -0.16
LIG1-206ENST00000594067 PCSK5Q92824 1860 aa14.08□□□□□ -0.16
LIG1-206ENST00000594067 A0A0G2JRQ6 117 aa14.08□□□□□ -0.16
LIG1-206ENST00000594067 PGLYRP1O75594 196 aaPredicted RBP14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms