RNA–Protein interactions for RNA: ENST00000592790.1

VMP1-216, Transcript of vacuole membrane protein 1, humanhuman

Gene VMP1, Length 4,325 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-216ENST00000592790 NXPH1P58417 271 aa3.08□□□□□ -1.92
VMP1-216ENST00000592790 PPP1CAP62136 330 aa3.08□□□□□ -1.92
VMP1-216ENST00000592790 QRFPP83859 136 aa3.08□□□□□ -1.92
VMP1-216ENST00000592790 NHLH2Q02577 135 aa3.08□□□□□ -1.92
VMP1-216ENST00000592790 ZNF90Q03938 601 aa3.08□□□□□ -1.92
VMP1-216ENST00000592790 SMAD2Q15796 467 aaKnown RBP3.08□□□□□ -1.92
VMP1-216ENST00000592790 NRN1LQ496H8 165 aa3.08□□□□□ -1.92
VMP1-216ENST00000592790 KRTCAP3Q53RY4 240 aa3.08□□□□□ -1.92
VMP1-216ENST00000592790 PDZD11Q5EBL8 140 aa3.08□□□□□ -1.92
VMP1-216ENST00000592790 C9orf152Q5JTZ5 239 aa3.08□□□□□ -1.92
VMP1-216ENST00000592790 SFTPA1Q8IWL2 248 aa3.08□□□□□ -1.92
VMP1-216ENST00000592790 PAQR4Q8N4S7 273 aaPredicted RBP3.08□□□□□ -1.92
VMP1-216ENST00000592790 ZNF321PQ8N8H1 164 aa3.08□□□□□ -1.92
VMP1-216ENST00000592790 CYB561D1Q8N8Q1 229 aa3.08□□□□□ -1.92
VMP1-216ENST00000592790 OR1P1Q8NH06 330 aa3.08□□□□□ -1.92
VMP1-216ENST00000592790 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.08□□□□□ -1.92
VMP1-216ENST00000592790 ERGIC1Q969X5 290 aa3.08□□□□□ -1.92
VMP1-216ENST00000592790 TMEM230Q96A57 120 aa3.08□□□□□ -1.92
VMP1-216ENST00000592790 APH1AQ96BI3 265 aa3.08□□□□□ -1.92
VMP1-216ENST00000592790 TMEM56Q96MV1 263 aa3.08□□□□□ -1.92
VMP1-216ENST00000592790 VAMP8Q9BV40 100 aa3.08□□□□□ -1.92
VMP1-216ENST00000592790 TMEM56-RWDD3S4R434 201 aa3.08□□□□□ -1.92
VMP1-216ENST00000592790 PIEZO1Q92508 2521 aa3.08□□□□□ -1.92
VMP1-216ENST00000592790 SPG11Q96JI7 2443 aa3.08□□□□□ -1.92
VMP1-216ENST00000592790 SCN2AQ99250 2005 aa3.08□□□□□ -1.92
VMP1-216ENST00000592790 NUP210Q8TEM1 1887 aaPredicted RBP3.08□□□□□ -1.92
VMP1-216ENST00000592790 A0A0U1RQK1 487 aa3.07□□□□□ -1.92
VMP1-216ENST00000592790 MEX3AA1L020 520 aaKnown RBP3.07□□□□□ -1.92
VMP1-216ENST00000592790 ZNF320A2RRD8 509 aa3.07□□□□□ -1.92
VMP1-216ENST00000592790 LINC00587B1AMM8 73 aa3.07□□□□□ -1.92
VMP1-216ENST00000592790 K7N7A8 449 aa3.07□□□□□ -1.92
VMP1-216ENST00000592790 TRAF3IP2O43734 574 aaPredicted RBP3.07□□□□□ -1.92
VMP1-216ENST00000592790 ANGPTL7O43827 346 aa3.07□□□□□ -1.92
VMP1-216ENST00000592790 SRSF10O75494 262 aaKnown RBP3.07□□□□□ -1.92
VMP1-216ENST00000592790 CER1O95813 267 aa3.07□□□□□ -1.92
VMP1-216ENST00000592790 OPN1LWP04000 364 aa3.07□□□□□ -1.92
VMP1-216ENST00000592790 SRP19P09132 144 aaKnown RBP3.07□□□□□ -1.92
VMP1-216ENST00000592790 PGA5P0DJD9 388 aa3.07□□□□□ -1.92
VMP1-216ENST00000592790 COX5BP10606 129 aa3.07□□□□□ -1.92
VMP1-216ENST00000592790 SRFP11831 508 aa3.07□□□□□ -1.92
VMP1-216ENST00000592790 CEACAM1P13688 526 aa3.07□□□□□ -1.92
VMP1-216ENST00000592790 DAOP14920 347 aa3.07□□□□□ -1.92
VMP1-216ENST00000592790 F2RP25116 425 aa3.07□□□□□ -1.92
VMP1-216ENST00000592790 CYB561P49447 251 aa3.07□□□□□ -1.92
VMP1-216ENST00000592790 RPS23P62266 143 aaKnown RBP3.07□□□□□ -1.92
VMP1-216ENST00000592790 ARF1P84077 181 aaKnown RBP3.07□□□□□ -1.92
VMP1-216ENST00000592790 MEF2BQ02080 365 aaPredicted RBP3.07□□□□□ -1.92
VMP1-216ENST00000592790 MESP2Q0VG99 397 aa3.07□□□□□ -1.92
VMP1-216ENST00000592790 TIGITQ495A1 244 aa3.07□□□□□ -1.92
VMP1-216ENST00000592790 LYSMD4Q5XG99 296 aa3.07□□□□□ -1.92
VMP1-216ENST00000592790 OR8G2PQ6IF36 304 aa3.07□□□□□ -1.92
VMP1-216ENST00000592790 VHLLQ6RSH7 139 aa3.07□□□□□ -1.92
VMP1-216ENST00000592790 BTNL3Q6UXE8 466 aa3.07□□□□□ -1.92
VMP1-216ENST00000592790 DEFB119Q8N690 84 aa3.07□□□□□ -1.92
VMP1-216ENST00000592790 OR5T1Q8NG75 326 aa3.07□□□□□ -1.92
VMP1-216ENST00000592790 TMEM54Q969K7 222 aa3.07□□□□□ -1.92
VMP1-216ENST00000592790 ZNF845Q96IR2 970 aaPredicted RBP3.07□□□□□ -1.92
VMP1-216ENST00000592790 C18orf12Q96KH6 178 aa3.07□□□□□ -1.92
VMP1-216ENST00000592790 IP6K3Q96PC2 410 aa3.07□□□□□ -1.92
VMP1-216ENST00000592790 MS4A10Q96PG2 267 aa3.07□□□□□ -1.92
VMP1-216ENST00000592790 SOX7Q9BT81 388 aa3.07□□□□□ -1.92
VMP1-216ENST00000592790 MRPL13Q9BYD1 178 aaKnown RBP3.07□□□□□ -1.92
VMP1-216ENST00000592790 ZDHHC11Q9H8X9 412 aa3.07□□□□□ -1.92
VMP1-216ENST00000592790 KIAA1671Q9BY89 1806 aa3.07□□□□□ -1.92
VMP1-216ENST00000592790 WNK1Q9H4A3 2382 aa3.07□□□□□ -1.92
VMP1-216ENST00000592790 IGHV3-20A0A0C4DH32 117 aa3.07□□□□□ -1.92
VMP1-216ENST00000592790 TMEM30CPA0ZSE6 113 aa3.07□□□□□ -1.92
VMP1-216ENST00000592790 MASP2O00187 686 aa3.07□□□□□ -1.92
VMP1-216ENST00000592790 YIF1AO95070 293 aa3.07□□□□□ -1.92
VMP1-216ENST00000592790 MT-ND6P03923 174 aa3.07□□□□□ -1.92
VMP1-216ENST00000592790 IGHV4-34P06331 123 aa3.07□□□□□ -1.92
VMP1-216ENST00000592790 MMP7P09237 267 aaPredicted RBP3.07□□□□□ -1.92
VMP1-216ENST00000592790 ZNF32P17041 273 aa3.07□□□□□ -1.92
VMP1-216ENST00000592790 GCH1P30793 250 aa3.07□□□□□ -1.92
VMP1-216ENST00000592790 FGF12P61328 243 aa3.07□□□□□ -1.92
VMP1-216ENST00000592790 SUMO1P63165 101 aaKnown RBP3.07□□□□□ -1.92
VMP1-216ENST00000592790 PRDX4Q13162 271 aa3.07□□□□□ -1.92
VMP1-216ENST00000592790 PMS2P11Q13670 270 aa3.07□□□□□ -1.92
VMP1-216ENST00000592790 RNPS1Q15287 305 aaKnown RBP3.07□□□□□ -1.92
VMP1-216ENST00000592790 CEACAM16Q2WEN9 425 aa3.07□□□□□ -1.92
VMP1-216ENST00000592790 C4orf17Q53FE4 359 aa3.07□□□□□ -1.92
VMP1-216ENST00000592790 OTPQ5XKR4 325 aa3.07□□□□□ -1.92
VMP1-216ENST00000592790 LANCL3Q6ZV70 420 aa3.07□□□□□ -1.92
VMP1-216ENST00000592790 SELENOHQ8IZQ5 122 aaKnown RBP3.07□□□□□ -1.92
VMP1-216ENST00000592790 FAM58AQ8N1B3 248 aa3.07□□□□□ -1.92
VMP1-216ENST00000592790 GAPTQ8N292 157 aa3.07□□□□□ -1.92
VMP1-216ENST00000592790 OR10G3Q8NGC4 313 aa3.07□□□□□ -1.92
VMP1-216ENST00000592790 OR10G9Q8NGN4 311 aa3.07□□□□□ -1.92
VMP1-216ENST00000592790 OR10G7Q8NGN6 311 aa3.07□□□□□ -1.92
VMP1-216ENST00000592790 POC1BQ8TC44 478 aa3.07□□□□□ -1.92
VMP1-216ENST00000592790 GALMQ96C23 342 aa3.07□□□□□ -1.92
VMP1-216ENST00000592790 SDSLQ96GA7 329 aa3.07□□□□□ -1.92
VMP1-216ENST00000592790 LIN37Q96GY3 246 aaPredicted RBP3.07□□□□□ -1.92
VMP1-216ENST00000592790 NEU1Q99519 415 aa3.07□□□□□ -1.92
VMP1-216ENST00000592790 ESRP2Q9H6T0 727 aaKnown RBP3.07□□□□□ -1.92
VMP1-216ENST00000592790 SEBOXQ9HB31 216 aaPredicted RBP3.07□□□□□ -1.92
VMP1-216ENST00000592790 HEYLQ9NQ87 328 aaPredicted RBP3.07□□□□□ -1.92
VMP1-216ENST00000592790 TMEM38BQ9NVV0 291 aa3.07□□□□□ -1.92
VMP1-216ENST00000592790 FKBP11Q9NYL4 201 aa3.07□□□□□ -1.92
VMP1-216ENST00000592790 CACNG5Q9UF02 275 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms