RNA–Protein interactions for RNA: ENST00000590627.5

GCDH-213, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 1 (best)

Gene GCDH, Length 1,051 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-213ENST00000590627 WDR25Q64LD2 544 aaPredicted RBP13.7□□□□□ -0.22
GCDH-213ENST00000590627 GDPD3Q7L5L3 318 aa13.7□□□□□ -0.22
GCDH-213ENST00000590627 MRPL30Q8TCC3 161 aaKnown RBP13.7□□□□□ -0.22
GCDH-213ENST00000590627 SMIM4Q8WVI0 70 aa13.7□□□□□ -0.22
GCDH-213ENST00000590627 NUDCD2Q8WVJ2 157 aa13.7□□□□□ -0.22
GCDH-213ENST00000590627 RAB39BQ96DA2 213 aa13.7□□□□□ -0.22
GCDH-213ENST00000590627 SDHCQ99643 169 aaPredicted RBP13.7□□□□□ -0.22
GCDH-213ENST00000590627 NARFLQ9H6Q4 476 aa13.7□□□□□ -0.22
GCDH-213ENST00000590627 ANAPC10Q9UM13 185 aa13.7□□□□□ -0.22
GCDH-213ENST00000590627 ODAMA1E959 279 aa13.69□□□□□ -0.22
GCDH-213ENST00000590627 NDUFB7P17568 137 aa13.69□□□□□ -0.22
GCDH-213ENST00000590627 GLIPR1P48060 266 aa13.69□□□□□ -0.22
GCDH-213ENST00000590627 MRPS15P82914 257 aaKnown RBP13.69□□□□□ -0.22
GCDH-213ENST00000590627 DGCR2P98153 550 aa13.69□□□□□ -0.22
GCDH-213ENST00000590627 GUCA2AQ02747 115 aa13.69□□□□□ -0.22
GCDH-213ENST00000590627 SSBP1Q04837 148 aaKnown RBP13.69□□□□□ -0.22
GCDH-213ENST00000590627 MEF2CQ06413 473 aaPredicted RBP13.69□□□□□ -0.22
GCDH-213ENST00000590627 ZNF880Q6PDB4 577 aa13.69□□□□□ -0.22
GCDH-213ENST00000590627 Q6ZS49 121 aa13.69□□□□□ -0.22
GCDH-213ENST00000590627 TRAPPC6BQ86SZ2 158 aa13.69□□□□□ -0.22
GCDH-213ENST00000590627 OR52I2Q8NH67 350 aa13.69□□□□□ -0.22
GCDH-213ENST00000590627 FCAMRQ8WWV6 532 aa13.69□□□□□ -0.22
GCDH-213ENST00000590627 GCDHQ92947 438 aaPredicted RBP13.69□□□□□ -0.22
GCDH-213ENST00000590627 HDHD3Q9BSH5 251 aaPredicted RBP13.69□□□□□ -0.22
GCDH-213ENST00000590627 MBNL3Q9NUK0 354 aaKnown RBP13.69□□□□□ -0.22
GCDH-213ENST00000590627 CLN8Q9UBY8 286 aa13.69□□□□□ -0.22
GCDH-213ENST00000590627 RBMX2Q9Y388 322 aaKnown RBP13.69□□□□□ -0.22
GCDH-213ENST00000590627 TRBV23-1A0A0A0MS06 115 aa13.68□□□□□ -0.22
GCDH-213ENST00000590627 A8MXK9 166 aa13.68□□□□□ -0.22
GCDH-213ENST00000590627 B4DSR2 109 aa13.68□□□□□ -0.22
GCDH-213ENST00000590627 ECDO95905 644 aaPredicted RBP13.68□□□□□ -0.22
GCDH-213ENST00000590627 FCGR3AP08637 254 aa13.68□□□□□ -0.22
GCDH-213ENST00000590627 SEC61A1P61619 476 aaKnown RBP13.68□□□□□ -0.22
GCDH-213ENST00000590627 EDDM3AQ14507 147 aa13.68□□□□□ -0.22
GCDH-213ENST00000590627 ESCO2Q56NI9 601 aa13.68□□□□□ -0.22
GCDH-213ENST00000590627 Q6ZPA2 131 aa13.68□□□□□ -0.22
GCDH-213ENST00000590627 MOB1BQ7L9L4 216 aa13.68□□□□□ -0.22
GCDH-213ENST00000590627 Q8N402 240 aa13.68□□□□□ -0.22
GCDH-213ENST00000590627 FGFRL1Q8N441 504 aa13.68□□□□□ -0.22
GCDH-213ENST00000590627 C8orf46Q8TAG6 207 aa13.68□□□□□ -0.22
GCDH-213ENST00000590627 CORO2AQ92828 525 aa13.68□□□□□ -0.22
GCDH-213ENST00000590627 CCDC32Q9BV29 185 aa13.68□□□□□ -0.22
GCDH-213ENST00000590627 SSBP3Q9BWW4 388 aaPredicted RBP13.68□□□□□ -0.22
GCDH-213ENST00000590627 MTFP1Q9UDX5 166 aa13.68□□□□□ -0.22
GCDH-213ENST00000590627 KIF25Q9UIL4 384 aa13.68□□□□□ -0.22
GCDH-213ENST00000590627 MEIKINA0A087WXM9 373 aa13.67□□□□□ -0.22
GCDH-213ENST00000590627 A0A0A6YYJ9 748 aa13.67□□□□□ -0.22
GCDH-213ENST00000590627 NAT1P18440 290 aa13.67□□□□□ -0.22
GCDH-213ENST00000590627 EDDM3BP56851 147 aa13.67□□□□□ -0.22
GCDH-213ENST00000590627 ZNF554Q86TJ5 538 aa13.67□□□□□ -0.22
GCDH-213ENST00000590627 HOGA1Q86XE5 327 aa13.67□□□□□ -0.22
GCDH-213ENST00000590627 DMRTB1Q96MA1 342 aa13.67□□□□□ -0.22
GCDH-213ENST00000590627 THAP7Q9BT49 309 aaPredicted RBP13.67□□□□□ -0.22
GCDH-213ENST00000590627 DCTN5Q9BTE1 182 aa13.67□□□□□ -0.22
GCDH-213ENST00000590627 CHMP1AQ9HD42 196 aaPredicted RBP13.67□□□□□ -0.22
GCDH-213ENST00000590627 Q9N2K0 584 aa13.67□□□□□ -0.22
GCDH-213ENST00000590627 OR6C3Q9NZP0 311 aa13.67□□□□□ -0.22
GCDH-213ENST00000590627 ZNF107Q9UII5 783 aaPredicted RBP13.67□□□□□ -0.22
GCDH-213ENST00000590627 MGAT4AQ9UM21 535 aa13.67□□□□□ -0.22
GCDH-213ENST00000590627 POLR3KQ9Y2Y1 108 aaPredicted RBP13.67□□□□□ -0.22
GCDH-213ENST00000590627 hADV38S2A0JD32 116 aa13.66□□□□□ -0.22
GCDH-213ENST00000590627 RBBP9O75884 186 aa13.66□□□□□ -0.22
GCDH-213ENST00000590627 CGB3P0DN86 165 aa13.66□□□□□ -0.22
GCDH-213ENST00000590627 CGB7P0DN87 165 aa13.66□□□□□ -0.22
GCDH-213ENST00000590627 ACTBP60709 375 aa13.66□□□□□ -0.22
GCDH-213ENST00000590627 GNB2P62879 340 aa13.66□□□□□ -0.22
GCDH-213ENST00000590627 RPL31P62899 125 aaKnown RBP13.66□□□□□ -0.22
GCDH-213ENST00000590627 ACTG1P63261 375 aa13.66□□□□□ -0.22
GCDH-213ENST00000590627 CD276Q5ZPR3 534 aa13.66□□□□□ -0.22
GCDH-213ENST00000590627 TRAT1Q6PIZ9 186 aa13.66□□□□□ -0.22
GCDH-213ENST00000590627 BTN2A1Q7KYR7 527 aa13.66□□□□□ -0.22
GCDH-213ENST00000590627 GLCCI1Q86VQ1 547 aa13.66□□□□□ -0.22
GCDH-213ENST00000590627 TPRX1Q8N7U7 411 aa13.66□□□□□ -0.22
GCDH-213ENST00000590627 OR4K15Q8NH41 348 aa13.66□□□□□ -0.22
GCDH-213ENST00000590627 TRIM63Q969Q1 353 aa13.66□□□□□ -0.22
GCDH-213ENST00000590627 C19orf12Q9NSK7 152 aa13.66□□□□□ -0.22
GCDH-213ENST00000590627 ING3Q9NXR8 418 aa13.66□□□□□ -0.22
GCDH-213ENST00000590627 KLK11Q9UBX7 282 aa13.66□□□□□ -0.22
GCDH-213ENST00000590627 TRAPPC2LQ9UL33 140 aa13.66□□□□□ -0.22
GCDH-213ENST00000590627 LINC00312Q9Y6C7 94 aa13.66□□□□□ -0.22
GCDH-213ENST00000590627 ORC5O43913 435 aa13.65□□□□□ -0.22
GCDH-213ENST00000590627 FOXH1O75593 365 aa13.65□□□□□ -0.22
GCDH-213ENST00000590627 RCC1P18754 421 aaPredicted RBP13.65□□□□□ -0.22
GCDH-213ENST00000590627 GZMHP20718 246 aa13.65□□□□□ -0.22
GCDH-213ENST00000590627 RCVRNP35243 200 aa13.65□□□□□ -0.22
GCDH-213ENST00000590627 BAK1Q16611 211 aa13.65□□□□□ -0.22
GCDH-213ENST00000590627 C6orf183Q5T699 404 aa13.65□□□□□ -0.22
GCDH-213ENST00000590627 TMEM200BQ69YZ2 307 aa13.65□□□□□ -0.22
GCDH-213ENST00000590627 TCF23Q7RTU1 214 aa13.65□□□□□ -0.22
GCDH-213ENST00000590627 ZNF565Q8N9K5 539 aa13.65□□□□□ -0.22
GCDH-213ENST00000590627 LY6G5BQ8NDX9 201 aa13.65□□□□□ -0.22
GCDH-213ENST00000590627 OR13A1Q8NGR1 328 aa13.65□□□□□ -0.22
GCDH-213ENST00000590627 CCDC107Q8WV48 283 aa13.65□□□□□ -0.22
GCDH-213ENST00000590627 ZFAND2BQ8WV99 257 aa13.65□□□□□ -0.22
GCDH-213ENST00000590627 ST6GALNAC5Q9BVH7 336 aa13.65□□□□□ -0.22
GCDH-213ENST00000590627 LINC00574Q9H8X3 128 aa13.65□□□□□ -0.22
GCDH-213ENST00000590627 IFT46Q9NQC8 304 aa13.65□□□□□ -0.22
GCDH-213ENST00000590627 OPN4Q9UHM6 478 aa13.65□□□□□ -0.22
GCDH-213ENST00000590627 ZNF230Q9UIE0 474 aaPredicted RBP13.65□□□□□ -0.22
GCDH-213ENST00000590627 RPUSD1Q9UJJ7 312 aaKnown RBP13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms