RNA–Protein interactions for RNA: ENST00000587988.5

SMARCA4-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 552 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-213ENST00000587988 FAM120AOSQ5T036 256 aa8.77□□□□□ -1.01
SMARCA4-213ENST00000587988 UTF1Q5T230 341 aa8.77□□□□□ -1.01
SMARCA4-213ENST00000587988 PRAMEF5Q5TYX0 476 aa8.77□□□□□ -1.01
SMARCA4-213ENST00000587988 METTL11BQ5VVY1 283 aa8.77□□□□□ -1.01
SMARCA4-213ENST00000587988 ZNF880Q6PDB4 577 aa8.77□□□□□ -1.01
SMARCA4-213ENST00000587988 ZNF782Q6ZMW2 699 aaPredicted RBP8.77□□□□□ -1.01
SMARCA4-213ENST00000587988 C1orf122Q6ZSJ8 110 aa8.77□□□□□ -1.01
SMARCA4-213ENST00000587988 PDZD9Q8IXQ8 264 aa8.77□□□□□ -1.01
SMARCA4-213ENST00000587988 ZNF565Q8N9K5 539 aa8.77□□□□□ -1.01
SMARCA4-213ENST00000587988 MCFD2Q8NI22 146 aa8.77□□□□□ -1.01
SMARCA4-213ENST00000587988 RFESDQ8TAC1 157 aa8.77□□□□□ -1.01
SMARCA4-213ENST00000587988 TNFRSF14Q92956 283 aa8.77□□□□□ -1.01
SMARCA4-213ENST00000587988 PHF21AQ96BD5 680 aa8.77□□□□□ -1.01
SMARCA4-213ENST00000587988 UPRTQ96BW1 309 aa8.77□□□□□ -1.01
SMARCA4-213ENST00000587988 C6orf62Q9GZU0 229 aaPredicted RBP8.77□□□□□ -1.01
SMARCA4-213ENST00000587988 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.77□□□□□ -1.01
SMARCA4-213ENST00000587988 MBNL3Q9NUK0 354 aaKnown RBP8.77□□□□□ -1.01
SMARCA4-213ENST00000587988 TAS2R3Q9NYW6 316 aa8.77□□□□□ -1.01
SMARCA4-213ENST00000587988 TRBV6-6A0A0A6YYG2 114 aa8.76□□□□□ -1.01
SMARCA4-213ENST00000587988 KBTBD11-OT1A0A1B0GTJ5 212 aa8.76□□□□□ -1.01
SMARCA4-213ENST00000587988 A0A1W2PPH5 198 aa8.76□□□□□ -1.01
SMARCA4-213ENST00000587988 ZNF729A6NN14 1252 aaPredicted RBP8.76□□□□□ -1.01
SMARCA4-213ENST00000587988 SERPINE3A8MV23 424 aa8.76□□□□□ -1.01
SMARCA4-213ENST00000587988 C12orf77C9JDV5 145 aa8.76□□□□□ -1.01
SMARCA4-213ENST00000587988 NPIPB11E5RHQ5 1161 aa8.76□□□□□ -1.01
SMARCA4-213ENST00000587988 C15orf65H3BRN8 121 aa8.76□□□□□ -1.01
SMARCA4-213ENST00000587988 SSX5O60225 188 aa8.76□□□□□ -1.01
SMARCA4-213ENST00000587988 HLA-DQB1P01920 261 aa8.76□□□□□ -1.01
SMARCA4-213ENST00000587988 GSTP1P09211 210 aaKnown RBP8.76□□□□□ -1.01
SMARCA4-213ENST00000587988 CD3GP09693 182 aa8.76□□□□□ -1.01
SMARCA4-213ENST00000587988 IGHV1-8P0DP01 117 aa8.76□□□□□ -1.01
SMARCA4-213ENST00000587988 IGHV4-38-2P0DP08 117 aa8.76□□□□□ -1.01
SMARCA4-213ENST00000587988 HOXB4P17483 251 aaPredicted RBP8.76□□□□□ -1.01
SMARCA4-213ENST00000587988 PRTN3P24158 256 aa8.76□□□□□ -1.01
SMARCA4-213ENST00000587988 TAS2R20P59543 309 aa8.76□□□□□ -1.01
SMARCA4-213ENST00000587988 ARFRP1Q13795 201 aa8.76□□□□□ -1.01
SMARCA4-213ENST00000587988 TMEM69Q5SWH9 247 aa8.76□□□□□ -1.01
SMARCA4-213ENST00000587988 HACD4Q5VWC8 232 aa8.76□□□□□ -1.01
SMARCA4-213ENST00000587988 HCP5Q6MZN7 132 aa8.76□□□□□ -1.01
SMARCA4-213ENST00000587988 SETD6Q8TBK2 473 aa8.76□□□□□ -1.01
SMARCA4-213ENST00000587988 NUDCD2Q8WVJ2 157 aa8.76□□□□□ -1.01
SMARCA4-213ENST00000587988 MAFIPQ8WZ33 124 aa8.76□□□□□ -1.01
SMARCA4-213ENST00000587988 GCDHQ92947 438 aaPredicted RBP8.76□□□□□ -1.01
SMARCA4-213ENST00000587988 LHX4Q969G2 390 aa8.76□□□□□ -1.01
SMARCA4-213ENST00000587988 ARL11Q969Q4 196 aa8.76□□□□□ -1.01
SMARCA4-213ENST00000587988 AUNIPQ9H7T9 357 aa8.76□□□□□ -1.01
SMARCA4-213ENST00000587988 METTL8Q9H825 291 aaKnown RBP8.76□□□□□ -1.01
SMARCA4-213ENST00000587988 CHMP1AQ9HD42 196 aaPredicted RBP8.76□□□□□ -1.01
SMARCA4-213ENST00000587988 TMEM160Q9NX00 188 aa8.76□□□□□ -1.01
SMARCA4-213ENST00000587988 CALYQ9NYX4 217 aa8.76□□□□□ -1.01
SMARCA4-213ENST00000587988 EXTL2Q9UBQ6 330 aa8.76□□□□□ -1.01
SMARCA4-213ENST00000587988 ZNF230Q9UIE0 474 aaPredicted RBP8.76□□□□□ -1.01
SMARCA4-213ENST00000587988 TLN2Q9Y4G6 2542 aa8.75□□□□□ -1.01
SMARCA4-213ENST00000587988 TRAV40A0A0B4J280 105 aa8.75□□□□□ -1.01
SMARCA4-213ENST00000587988 CENPVL3A0A0U1RRI6 287 aa8.75□□□□□ -1.01
SMARCA4-213ENST00000587988 FAM172BPA6NC97 362 aa8.75□□□□□ -1.01
SMARCA4-213ENST00000587988 RNASEK-C17orf49H0YIS7 233 aa8.75□□□□□ -1.01
SMARCA4-213ENST00000587988 CLPXO76031 633 aa8.75□□□□□ -1.01
SMARCA4-213ENST00000587988 FSHBP01225 129 aa8.75□□□□□ -1.01
SMARCA4-213ENST00000587988 MELTFP08582 738 aa8.75□□□□□ -1.01
SMARCA4-213ENST00000587988 FCGR3AP08637 254 aa8.75□□□□□ -1.01
SMARCA4-213ENST00000587988 GZMHP20718 246 aa8.75□□□□□ -1.01
SMARCA4-213ENST00000587988 GUCA2AQ02747 115 aa8.75□□□□□ -1.01
SMARCA4-213ENST00000587988 LTC4SQ16873 150 aa8.75□□□□□ -1.01
SMARCA4-213ENST00000587988 PNLIPRP3Q17RR3 467 aa8.75□□□□□ -1.01
SMARCA4-213ENST00000587988 FAM53AQ6NSI3 398 aaPredicted RBP8.75□□□□□ -1.01
SMARCA4-213ENST00000587988 CNIH2Q6PI25 160 aa8.75□□□□□ -1.01
SMARCA4-213ENST00000587988 HEPN1Q6WQI6 88 aa8.75□□□□□ -1.01
SMARCA4-213ENST00000587988 PNKDQ8N490 385 aa8.75□□□□□ -1.01
SMARCA4-213ENST00000587988 PRR18Q8N4B5 295 aa8.75□□□□□ -1.01
SMARCA4-213ENST00000587988 OR1L1Q8NH94 360 aa8.75□□□□□ -1.01
SMARCA4-213ENST00000587988 GAL3ST2Q9H3Q3 398 aa8.75□□□□□ -1.01
SMARCA4-213ENST00000587988 RIMS4Q9H426 269 aaPredicted RBP8.75□□□□□ -1.01
SMARCA4-213ENST00000587988 LINC00574Q9H8X3 128 aa8.75□□□□□ -1.01
SMARCA4-213ENST00000587988 UNKLQ9H9P5 680 aaKnown RBP8.75□□□□□ -1.01
SMARCA4-213ENST00000587988 TAF9BQ9HBM6 251 aa8.75□□□□□ -1.01
SMARCA4-213ENST00000587988 Q9N2K0 584 aa8.75□□□□□ -1.01
SMARCA4-213ENST00000587988 C12orf4Q9NQ89 552 aa8.75□□□□□ -1.01
SMARCA4-213ENST00000587988 BATF3Q9NR55 127 aa8.75□□□□□ -1.01
SMARCA4-213ENST00000587988 IDI2-AS1Q9NZ38 188 aa8.75□□□□□ -1.01
SMARCA4-213ENST00000587988 MRPS7Q9Y2R9 242 aaKnown RBP8.75□□□□□ -1.01
SMARCA4-213ENST00000587988 SOX21Q9Y651 276 aaPredicted RBP8.75□□□□□ -1.01
SMARCA4-213ENST00000587988 SESN1Q9Y6P5 492 aa8.75□□□□□ -1.01
SMARCA4-213ENST00000587988 IGKV1D-8A0A087WSZ0 117 aa8.74□□□□□ -1.01
SMARCA4-213ENST00000587988 IGHV3-43A0A0B4J1X8 118 aa8.74□□□□□ -1.01
SMARCA4-213ENST00000587988 A0A1W2PRD5 423 aa8.74□□□□□ -1.01
SMARCA4-213ENST00000587988 A0A1W2PRF3 423 aa8.74□□□□□ -1.01
SMARCA4-213ENST00000587988 A0A1W2PRM7 423 aa8.74□□□□□ -1.01
SMARCA4-213ENST00000587988 MEIOCA2RUB1 952 aa8.74□□□□□ -1.01
SMARCA4-213ENST00000587988 MEIS3P1A6NDR6 274 aa8.74□□□□□ -1.01
SMARCA4-213ENST00000587988 ORC5O43913 435 aa8.74□□□□□ -1.01
SMARCA4-213ENST00000587988 HBZP02008 142 aa8.74□□□□□ -1.01
SMARCA4-213ENST00000587988 RBP4P02753 201 aa8.74□□□□□ -1.01
SMARCA4-213ENST00000587988 IGHV3-43DP0DP04 118 aa8.74□□□□□ -1.01
SMARCA4-213ENST00000587988 COX7A1P24310 79 aa8.74□□□□□ -1.01
SMARCA4-213ENST00000587988 TNFSF8P32971 234 aa8.74□□□□□ -1.01
SMARCA4-213ENST00000587988 MNDAP41218 407 aa8.74□□□□□ -1.01
SMARCA4-213ENST00000587988 GNG2P59768 71 aa8.74□□□□□ -1.01
SMARCA4-213ENST00000587988 MRPS15P82914 257 aaKnown RBP8.74□□□□□ -1.01
SMARCA4-213ENST00000587988 ARL6IP1Q15041 203 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms