RNA–Protein interactions for RNA: ENST00000585740.5

LIG3-204, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-204ENST00000585740 OR10Z1Q8NGY1 313 aa9.54□□□□□ -0.88
LIG3-204ENST00000585740 OR10J5Q8NHC4 309 aa9.54□□□□□ -0.88
LIG3-204ENST00000585740 LILRB1Q8NHL6 650 aaPredicted RBP9.54□□□□□ -0.88
LIG3-204ENST00000585740 MARVELD3Q96A59 401 aa9.54□□□□□ -0.88
LIG3-204ENST00000585740 S100PBPQ96BU1 408 aa9.54□□□□□ -0.88
LIG3-204ENST00000585740 C18orf12Q96KH6 178 aa9.54□□□□□ -0.88
LIG3-204ENST00000585740 OR10C1Q96KK4 312 aa9.54□□□□□ -0.88
LIG3-204ENST00000585740 AQP10Q96PS8 301 aa9.54□□□□□ -0.88
LIG3-204ENST00000585740 SPIN2AQ99865 258 aa9.54□□□□□ -0.88
LIG3-204ENST00000585740 SPIN2BQ9BPZ2 258 aa9.54□□□□□ -0.88
LIG3-204ENST00000585740 RNF126Q9BV68 326 aa9.54□□□□□ -0.88
LIG3-204ENST00000585740 SEBOXQ9HB31 216 aaPredicted RBP9.54□□□□□ -0.88
LIG3-204ENST00000585740 TMED3Q9Y3Q3 217 aa9.54□□□□□ -0.88
LIG3-204ENST00000585740 WIPI2Q9Y4P8 454 aa9.54□□□□□ -0.88
LIG3-204ENST00000585740 C3orf85A0A1B0GTC6 90 aa9.53□□□□□ -0.88
LIG3-204ENST00000585740 TMEM30CPA0ZSE6 113 aa9.53□□□□□ -0.88
LIG3-204ENST00000585740 A6NLC8 198 aa9.53□□□□□ -0.88
LIG3-204ENST00000585740 A8MXE2 369 aa9.53□□□□□ -0.88
LIG3-204ENST00000585740 F5H0A9 414 aaPredicted RBP9.53□□□□□ -0.88
LIG3-204ENST00000585740 IFNL4K9M1U5 179 aa9.53□□□□□ -0.88
LIG3-204ENST00000585740 SIRPB1O00241 398 aa9.53□□□□□ -0.88
LIG3-204ENST00000585740 HSPB6O14558 160 aa9.53□□□□□ -0.88
LIG3-204ENST00000585740 TAAR5O14804 337 aa9.53□□□□□ -0.88
LIG3-204ENST00000585740 PHF1O43189 567 aaPredicted RBP9.53□□□□□ -0.88
LIG3-204ENST00000585740 IGHV3-13P01766 116 aa9.53□□□□□ -0.88
LIG3-204ENST00000585740 WNT2P09544 360 aa9.53□□□□□ -0.88
LIG3-204ENST00000585740 RRASP10301 218 aa9.53□□□□□ -0.88
LIG3-204ENST00000585740 ZNF250P15622 560 aa9.53□□□□□ -0.88
LIG3-204ENST00000585740 ZNF83P51522 516 aa9.53□□□□□ -0.88
LIG3-204ENST00000585740 SELENOVP59797 346 aa9.53□□□□□ -0.88
LIG3-204ENST00000585740 S100A10P60903 97 aa9.53□□□□□ -0.88
LIG3-204ENST00000585740 RAB32Q13637 225 aa9.53□□□□□ -0.88
LIG3-204ENST00000585740 SMIM21Q3B7S5 101 aa9.53□□□□□ -0.88
LIG3-204ENST00000585740 SLC35E4Q6ICL7 350 aa9.53□□□□□ -0.88
LIG3-204ENST00000585740 GFRALQ6UXV0 394 aa9.53□□□□□ -0.88
LIG3-204ENST00000585740 ACP7Q6ZNF0 438 aa9.53□□□□□ -0.88
LIG3-204ENST00000585740 COMMD7Q86VX2 200 aa9.53□□□□□ -0.88
LIG3-204ENST00000585740 LDLRAD3Q86YD5 345 aa9.53□□□□□ -0.88
LIG3-204ENST00000585740 FAM90A1Q86YD7 464 aa9.53□□□□□ -0.88
LIG3-204ENST00000585740 PDZD9Q8IXQ8 264 aa9.53□□□□□ -0.88
LIG3-204ENST00000585740 H1FOOQ8IZA3 346 aaPredicted RBP9.53□□□□□ -0.88
LIG3-204ENST00000585740 STOML3Q8TAV4 291 aa9.53□□□□□ -0.88
LIG3-204ENST00000585740 LRRC20Q8TCA0 184 aa9.53□□□□□ -0.88
LIG3-204ENST00000585740 SECTM1Q8WVN6 248 aa9.53□□□□□ -0.88
LIG3-204ENST00000585740 IL22RA2Q969J5 263 aa9.53□□□□□ -0.88
LIG3-204ENST00000585740 MRPL24Q96A35 216 aaKnown RBP9.53□□□□□ -0.88
LIG3-204ENST00000585740 MSI2Q96DH6 328 aaKnown RBP9.53□□□□□ -0.88
LIG3-204ENST00000585740 CITED4Q96RK1 184 aa9.53□□□□□ -0.88
LIG3-204ENST00000585740 ZNF471Q9BX82 626 aaPredicted RBP9.53□□□□□ -0.88
LIG3-204ENST00000585740 PRR13Q9NZ81 148 aa9.53□□□□□ -0.88
LIG3-204ENST00000585740 KCNIP1Q9NZI2 227 aa9.53□□□□□ -0.88
LIG3-204ENST00000585740 GSKIPQ9P0R6 139 aa9.53□□□□□ -0.88
LIG3-204ENST00000585740 LUZP4Q9P127 313 aa9.53□□□□□ -0.88
LIG3-204ENST00000585740 TAAR3PQ9P1P4 343 aa9.53□□□□□ -0.88
LIG3-204ENST00000585740 PFDN2Q9UHV9 154 aa9.53□□□□□ -0.88
LIG3-204ENST00000585740 TRAPPC2LQ9UL33 140 aa9.53□□□□□ -0.88
LIG3-204ENST00000585740 OR2W1Q9Y3N9 320 aa9.53□□□□□ -0.88
LIG3-204ENST00000585740 PTPN13Q12923 2485 aa9.53□□□□□ -0.88
LIG3-204ENST00000585740 H0YIZ8 118 aa9.52□□□□□ -0.89
LIG3-204ENST00000585740 SPDEFO95238 335 aa9.52□□□□□ -0.89
LIG3-204ENST00000585740 CDS2O95674 445 aa9.52□□□□□ -0.89
LIG3-204ENST00000585740 PTBP3O95758 552 aaKnown RBP9.52□□□□□ -0.89
LIG3-204ENST00000585740 TPT1P13693 172 aaKnown RBP9.52□□□□□ -0.89
LIG3-204ENST00000585740 GNRHRP30968 328 aa9.52□□□□□ -0.89
LIG3-204ENST00000585740 KLF3P57682 345 aaPredicted RBP9.52□□□□□ -0.89
LIG3-204ENST00000585740 HERPUD1Q15011 391 aa9.52□□□□□ -0.89
LIG3-204ENST00000585740 HMGN3Q15651 99 aa9.52□□□□□ -0.89
LIG3-204ENST00000585740 C6orf183Q5T699 404 aa9.52□□□□□ -0.89
LIG3-204ENST00000585740 ALKAL2Q6UX46 152 aa9.52□□□□□ -0.89
LIG3-204ENST00000585740 Q6ZR03 302 aa9.52□□□□□ -0.89
LIG3-204ENST00000585740 TBC1D26Q86UD7 250 aa9.52□□□□□ -0.89
LIG3-204ENST00000585740 C11orf53Q8IXP5 236 aa9.52□□□□□ -0.89
LIG3-204ENST00000585740 ABHD14BQ96IU4 210 aa9.52□□□□□ -0.89
LIG3-204ENST00000585740 AKR1E2Q96JD6 320 aa9.52□□□□□ -0.89
LIG3-204ENST00000585740 TMEM56Q96MV1 263 aa9.52□□□□□ -0.89
LIG3-204ENST00000585740 SHARPINQ9H0F6 387 aa9.52□□□□□ -0.89
LIG3-204ENST00000585740 TMEM222Q9H0R3 208 aa9.52□□□□□ -0.89
LIG3-204ENST00000585740 PLEKHA2Q9HB19 425 aa9.52□□□□□ -0.89
LIG3-204ENST00000585740 MBNL3Q9NUK0 354 aaKnown RBP9.52□□□□□ -0.89
LIG3-204ENST00000585740 ZNF835Q9Y2P0 537 aa9.52□□□□□ -0.89
LIG3-204ENST00000585740 UBE2J1Q9Y385 318 aaPredicted RBP9.52□□□□□ -0.89
LIG3-204ENST00000585740 TMEM56-RWDD3S4R434 201 aa9.52□□□□□ -0.89
LIG3-204ENST00000585740 CHD3Q12873 2000 aaKnown RBP9.51□□□□□ -0.89
LIG3-204ENST00000585740 IGKV1-6A0A0C4DH72 117 aa9.51□□□□□ -0.89
LIG3-204ENST00000585740 MPTX1A8MV57 137 aa9.51□□□□□ -0.89
LIG3-204ENST00000585740 E5RGE8 158 aa9.51□□□□□ -0.89
LIG3-204ENST00000585740 H0Y980 276 aa9.51□□□□□ -0.89
LIG3-204ENST00000585740 DEDDO75618 318 aa9.51□□□□□ -0.89
LIG3-204ENST00000585740 CFHR2P36980 270 aa9.51□□□□□ -0.89
LIG3-204ENST00000585740 LUMP51884 338 aaPredicted RBP9.51□□□□□ -0.89
LIG3-204ENST00000585740 NKX6-1P78426 367 aaPredicted RBP9.51□□□□□ -0.89
LIG3-204ENST00000585740 SP6Q3SY56 376 aa9.51□□□□□ -0.89
LIG3-204ENST00000585740 TRAT1Q6PIZ9 186 aa9.51□□□□□ -0.89
LIG3-204ENST00000585740 WDR82Q6UXN9 313 aa9.51□□□□□ -0.89
LIG3-204ENST00000585740 DOLPP1Q86YN1 238 aa9.51□□□□□ -0.89
LIG3-204ENST00000585740 ZNF695Q8IW36 515 aa9.51□□□□□ -0.89
LIG3-204ENST00000585740 RPRMLQ8N4K4 120 aa9.51□□□□□ -0.89
LIG3-204ENST00000585740 CISD2Q8N5K1 135 aaKnown RBP9.51□□□□□ -0.89
LIG3-204ENST00000585740 Q8NA96 180 aa9.51□□□□□ -0.89
LIG3-204ENST00000585740 BVESQ8NE79 360 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 102 ms