RNA–Protein interactions for RNA: ENST00000584897.5

SMCHD1-211, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,143 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-211ENST00000584897 HMGN4O00479 90 aa1.54□□□□□ -2.16
SMCHD1-211ENST00000584897 NR5A2O00482 541 aa1.54□□□□□ -2.16
SMCHD1-211ENST00000584897 RAMP3O60896 148 aa1.54□□□□□ -2.16
SMCHD1-211ENST00000584897 SNAPC5O75971 98 aa1.54□□□□□ -2.16
SMCHD1-211ENST00000584897 CPSF4O95639 269 aaKnown RBP1.54□□□□□ -2.16
SMCHD1-211ENST00000584897 RBMY1DP0C7P1 496 aaKnown RBP1.54□□□□□ -2.16
SMCHD1-211ENST00000584897 RBMY1A1P0DJD3 496 aaKnown RBP1.54□□□□□ -2.16
SMCHD1-211ENST00000584897 ZNF26P17031 533 aaPredicted RBP1.54□□□□□ -2.16
SMCHD1-211ENST00000584897 S100A7P31151 101 aa1.54□□□□□ -2.16
SMCHD1-211ENST00000584897 CFHR2P36980 270 aa1.54□□□□□ -2.16
SMCHD1-211ENST00000584897 PTGDSP41222 190 aa1.54□□□□□ -2.16
SMCHD1-211ENST00000584897 BIDP55957 195 aa1.54□□□□□ -2.16
SMCHD1-211ENST00000584897 TMEM33P57088 247 aa1.54□□□□□ -2.16
SMCHD1-211ENST00000584897 FBXW4P57775 412 aa1.54□□□□□ -2.16
SMCHD1-211ENST00000584897 OR2B6P58173 313 aa1.54□□□□□ -2.16
SMCHD1-211ENST00000584897 CDC42P60953 191 aa1.54□□□□□ -2.16
SMCHD1-211ENST00000584897 UBE2KP61086 200 aa1.54□□□□□ -2.16
SMCHD1-211ENST00000584897 GNGT1P63211 74 aa1.54□□□□□ -2.16
SMCHD1-211ENST00000584897 GLO1Q04760 184 aa1.54□□□□□ -2.16
SMCHD1-211ENST00000584897 GGTLC2Q14390 218 aa1.54□□□□□ -2.16
SMCHD1-211ENST00000584897 ZNF146Q15072 292 aa1.54□□□□□ -2.16
SMCHD1-211ENST00000584897 TIMM50Q3ZCQ8 353 aa1.54□□□□□ -2.16
SMCHD1-211ENST00000584897 GDPGP1Q6ZNW5 385 aa1.54□□□□□ -2.16
SMCHD1-211ENST00000584897 Q6ZSR3 168 aa1.54□□□□□ -2.16
SMCHD1-211ENST00000584897 SYS1Q8N2H4 156 aa1.54□□□□□ -2.16
SMCHD1-211ENST00000584897 FGFRL1Q8N441 504 aa1.54□□□□□ -2.16
SMCHD1-211ENST00000584897 TMEM252Q8N6L7 170 aa1.54□□□□□ -2.16
SMCHD1-211ENST00000584897 ZNF555Q8NEP9 628 aa1.54□□□□□ -2.16
SMCHD1-211ENST00000584897 NOXO1Q8NFA2 376 aa1.54□□□□□ -2.16
SMCHD1-211ENST00000584897 NANPQ8TBE9 248 aa1.54□□□□□ -2.16
SMCHD1-211ENST00000584897 TMEM239Q8WW34 195 aa1.54□□□□□ -2.16
SMCHD1-211ENST00000584897 GIMAP1Q8WWP7 306 aa1.54□□□□□ -2.16
SMCHD1-211ENST00000584897 RAB1CQ92928 201 aa1.54□□□□□ -2.16
SMCHD1-211ENST00000584897 TSLPQ969D9 159 aa1.54□□□□□ -2.16
SMCHD1-211ENST00000584897 ISOC2Q96AB3 205 aa1.54□□□□□ -2.16
SMCHD1-211ENST00000584897 APOBEC3DQ96AK3 386 aaPredicted RBP1.54□□□□□ -2.16
SMCHD1-211ENST00000584897 C8orf44Q96CB5 159 aa1.54□□□□□ -2.16
SMCHD1-211ENST00000584897 MRPS24Q96EL2 167 aaKnown RBP1.54□□□□□ -2.16
SMCHD1-211ENST00000584897 ZNF300Q96RE9 604 aaPredicted RBP1.54□□□□□ -2.16
SMCHD1-211ENST00000584897 OCR1Q9BZK8 76 aa1.54□□□□□ -2.16
SMCHD1-211ENST00000584897 SLC38A1Q9H2H9 487 aa1.54□□□□□ -2.16
SMCHD1-211ENST00000584897 SPACA1Q9HBV2 294 aa1.54□□□□□ -2.16
SMCHD1-211ENST00000584897 EXOSC4Q9NPD3 245 aaKnown RBP1.54□□□□□ -2.16
SMCHD1-211ENST00000584897 SLC17A7Q9P2U7 560 aa1.54□□□□□ -2.16
SMCHD1-211ENST00000584897 PEF1Q9UBV8 284 aaKnown RBP1.54□□□□□ -2.16
SMCHD1-211ENST00000584897 TFR2Q9UP52 801 aa1.54□□□□□ -2.16
SMCHD1-211ENST00000584897 POLDIP2Q9Y2S7 368 aa1.54□□□□□ -2.16
SMCHD1-211ENST00000584897 KIAA1549Q9HCM3 1950 aa1.54□□□□□ -2.16
SMCHD1-211ENST00000584897 ITPR2Q14571 2701 aa1.54□□□□□ -2.16
SMCHD1-211ENST00000584897 MYO18AQ92614 2054 aaKnown RBP1.54□□□□□ -2.16
SMCHD1-211ENST00000584897 EXPH5Q8NEV8 1989 aa1.54□□□□□ -2.16
SMCHD1-211ENST00000584897 A0A1W2PNU3 283 aaPredicted RBP1.54□□□□□ -2.16
SMCHD1-211ENST00000584897 EFCAB10A6NFE3 127 aa1.54□□□□□ -2.16
SMCHD1-211ENST00000584897 ZNF670-ZNF695F2Z2N8 137 aa1.54□□□□□ -2.16
SMCHD1-211ENST00000584897 CCL22O00626 93 aa1.54□□□□□ -2.16
SMCHD1-211ENST00000584897 GYG2O15488 501 aa1.54□□□□□ -2.16
SMCHD1-211ENST00000584897 AIREO43918 545 aa1.54□□□□□ -2.16
SMCHD1-211ENST00000584897 TRAPPC6AO75865 159 aa1.54□□□□□ -2.16
SMCHD1-211ENST00000584897 ZNF682O95780 498 aa1.54□□□□□ -2.16
SMCHD1-211ENST00000584897 TBX6O95947 436 aaPredicted RBP1.54□□□□□ -2.16
SMCHD1-211ENST00000584897 CYB5AP00167 134 aa1.54□□□□□ -2.16
SMCHD1-211ENST00000584897 PAHP00439 452 aa1.54□□□□□ -2.16
SMCHD1-211ENST00000584897 CST1P01037 141 aa1.54□□□□□ -2.16
SMCHD1-211ENST00000584897 BGLAPP02818 100 aa1.54□□□□□ -2.16
SMCHD1-211ENST00000584897 SHBGP04278 402 aa1.54□□□□□ -2.16
SMCHD1-211ENST00000584897 LAMP1P11279 417 aa1.54□□□□□ -2.16
SMCHD1-211ENST00000584897 NQO1P15559 274 aaKnown RBP1.54□□□□□ -2.16
SMCHD1-211ENST00000584897 ZNF823P16415 610 aa1.54□□□□□ -2.16
SMCHD1-211ENST00000584897 KITLGP21583 273 aa1.54□□□□□ -2.16
SMCHD1-211ENST00000584897 DCKP27707 260 aa1.54□□□□□ -2.16
SMCHD1-211ENST00000584897 AGTR1P30556 359 aa1.54□□□□□ -2.16
SMCHD1-211ENST00000584897 CDKN1BP46527 198 aa1.54□□□□□ -2.16
SMCHD1-211ENST00000584897 SNRPGP62308 76 aaKnown RBP1.54□□□□□ -2.16
SMCHD1-211ENST00000584897 HBA1P69905 142 aa1.54□□□□□ -2.16
SMCHD1-211ENST00000584897 LOXL1Q08397 574 aaPredicted RBP1.54□□□□□ -2.16
SMCHD1-211ENST00000584897 ATP6AP1Q15904 470 aa1.54□□□□□ -2.16
SMCHD1-211ENST00000584897 MAPK14Q16539 360 aa1.54□□□□□ -2.16
SMCHD1-211ENST00000584897 HIST3H3Q16695 136 aa1.54□□□□□ -2.16
SMCHD1-211ENST00000584897 DEFB110Q30KQ9 67 aa1.54□□□□□ -2.16
SMCHD1-211ENST00000584897 ZNF506Q5JVG8 444 aa1.54□□□□□ -2.16
SMCHD1-211ENST00000584897 NCMAPQ5T1S8 102 aa1.54□□□□□ -2.16
SMCHD1-211ENST00000584897 SMARCD3Q6STE5 483 aa1.54□□□□□ -2.16
SMCHD1-211ENST00000584897 LINC00299Q6ZSB3 139 aa1.54□□□□□ -2.16
SMCHD1-211ENST00000584897 NOTCH2NLQ7Z3S9 236 aa1.54□□□□□ -2.16
SMCHD1-211ENST00000584897 FAM220AQ7Z4H9 259 aa1.54□□□□□ -2.16
SMCHD1-211ENST00000584897 DOLPP1Q86YN1 238 aa1.54□□□□□ -2.16
SMCHD1-211ENST00000584897 ARIH2OSQ8N7S6 290 aa1.54□□□□□ -2.16
SMCHD1-211ENST00000584897 OR51L1Q8NGJ5 315 aa1.54□□□□□ -2.16
SMCHD1-211ENST00000584897 SUN5Q8TC36 379 aa1.54□□□□□ -2.16
SMCHD1-211ENST00000584897 ZDHHC19Q8WVZ1 309 aaPredicted RBP1.54□□□□□ -2.16
SMCHD1-211ENST00000584897 ITLN2Q8WWU7 325 aaPredicted RBP1.54□□□□□ -2.16
SMCHD1-211ENST00000584897 C11orf40Q8WZ69 217 aa1.54□□□□□ -2.16
SMCHD1-211ENST00000584897 GTF3AQ92664 365 aaKnown RBP1.54□□□□□ -2.16
SMCHD1-211ENST00000584897 TNFRSF14Q92956 283 aa1.54□□□□□ -2.16
SMCHD1-211ENST00000584897 FGGYQ96C11 551 aa1.54□□□□□ -2.16
SMCHD1-211ENST00000584897 PPP1R14BQ96C90 147 aa1.54□□□□□ -2.16
SMCHD1-211ENST00000584897 CENPNQ96H22 339 aaPredicted RBP1.54□□□□□ -2.16
SMCHD1-211ENST00000584897 TBX15Q96SF7 602 aa1.54□□□□□ -2.16
SMCHD1-211ENST00000584897 DCUN1D5Q9BTE7 237 aa1.54□□□□□ -2.16
SMCHD1-211ENST00000584897 CHIAQ9BZP6 476 aa1.54□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms