RNA–Protein interactions for RNA: ENST00000584074.5

PPP4R1-228, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-228ENST00000584074 UBALD1Q8TB05 177 aa17.14■□□□□ 0.33
PPP4R1-228ENST00000584074 CAPSLQ8WWF8 208 aa17.14■□□□□ 0.33
PPP4R1-228ENST00000584074 MYDGFQ969H8 173 aa17.14■□□□□ 0.33
PPP4R1-228ENST00000584074 TOMM40LQ969M1 308 aa17.14■□□□□ 0.33
PPP4R1-228ENST00000584074 RPEQ96AT9 228 aa17.14■□□□□ 0.33
PPP4R1-228ENST00000584074 MRPS24Q96EL2 167 aaKnown RBP17.14■□□□□ 0.33
PPP4R1-228ENST00000584074 AKR1E2Q96JD6 320 aa17.14■□□□□ 0.33
PPP4R1-228ENST00000584074 RBM14Q96PK6 669 aaKnown RBP17.14■□□□□ 0.33
PPP4R1-228ENST00000584074 OCSTAMPQ9BR26 566 aa17.14■□□□□ 0.33
PPP4R1-228ENST00000584074 RCC2Q9P258 522 aaKnown RBP17.14■□□□□ 0.33
PPP4R1-228ENST00000584074 LSM2Q9Y333 95 aaKnown RBP17.14■□□□□ 0.33
PPP4R1-228ENST00000584074 C15orf65H3BRN8 121 aa17.13■□□□□ 0.33
PPP4R1-228ENST00000584074 OR2F2O95006 317 aa17.13■□□□□ 0.33
PPP4R1-228ENST00000584074 MAPK3P27361 379 aaPredicted RBP17.13■□□□□ 0.33
PPP4R1-228ENST00000584074 VHLP40337 213 aa17.13■□□□□ 0.33
PPP4R1-228ENST00000584074 GP2P55259 537 aaKnown RBP17.13■□□□□ 0.33
PPP4R1-228ENST00000584074 GABPB1Q06547 395 aaPredicted RBP17.13■□□□□ 0.33
PPP4R1-228ENST00000584074 MADCAM1Q13477 382 aa17.13■□□□□ 0.33
PPP4R1-228ENST00000584074 DIAPH2-AS1Q14236 149 aa17.13■□□□□ 0.33
PPP4R1-228ENST00000584074 NSUN5P1Q3KNT7 163 aa17.13■□□□□ 0.33
PPP4R1-228ENST00000584074 ABCA11PQ4W5N1 156 aa17.13■□□□□ 0.33
PPP4R1-228ENST00000584074 ACSM3Q53FZ2 586 aa17.13■□□□□ 0.33
PPP4R1-228ENST00000584074 FAM27D1Q5T7N8 215 aa17.13■□□□□ 0.33
PPP4R1-228ENST00000584074 SLC16A12Q6ZSM3 486 aa17.13■□□□□ 0.33
PPP4R1-228ENST00000584074 THRSPQ92748 146 aa17.13■□□□□ 0.33
PPP4R1-228ENST00000584074 ARL11Q969Q4 196 aa17.13■□□□□ 0.33
PPP4R1-228ENST00000584074 TMED9Q9BVK6 235 aa17.13■□□□□ 0.33
PPP4R1-228ENST00000584074 SELENOIQ9C0D9 397 aa17.13■□□□□ 0.33
PPP4R1-228ENST00000584074 SPACA1Q9HBV2 294 aa17.13■□□□□ 0.33
PPP4R1-228ENST00000584074 SCN3BQ9NY72 215 aa17.13■□□□□ 0.33
PPP4R1-228ENST00000584074 SH2D7A6NKC9 451 aaPredicted RBP17.12■□□□□ 0.33
PPP4R1-228ENST00000584074 MCRIP1C9JLW8 97 aa17.12■□□□□ 0.33
PPP4R1-228ENST00000584074 CRTAPO75718 401 aaPredicted RBP17.12■□□□□ 0.33
PPP4R1-228ENST00000584074 AMY1AP04745 511 aa17.12■□□□□ 0.33
PPP4R1-228ENST00000584074 AMY2AP04746 511 aa17.12■□□□□ 0.33
PPP4R1-228ENST00000584074 MGMTP16455 207 aa17.12■□□□□ 0.33
PPP4R1-228ENST00000584074 SPHARQ15513 63 aa17.12■□□□□ 0.33
PPP4R1-228ENST00000584074 RAB12Q6IQ22 244 aa17.12■□□□□ 0.33
PPP4R1-228ENST00000584074 FAM53AQ6NSI3 398 aaPredicted RBP17.12■□□□□ 0.33
PPP4R1-228ENST00000584074 UNQ9370/PRO34162Q6UXP9 181 aa17.12■□□□□ 0.33
PPP4R1-228ENST00000584074 MS4A15Q8N5U1 240 aa17.12■□□□□ 0.33
PPP4R1-228ENST00000584074 NKAIN3Q8N8D7 197 aa17.12■□□□□ 0.33
PPP4R1-228ENST00000584074 OR10X1Q8NGY0 326 aa17.12■□□□□ 0.33
PPP4R1-228ENST00000584074 OR56B4Q8NH76 319 aa17.12■□□□□ 0.33
PPP4R1-228ENST00000584074 CYYR1Q96J86 154 aa17.12■□□□□ 0.33
PPP4R1-228ENST00000584074 CITED2Q99967 270 aaPredicted RBP17.12■□□□□ 0.33
PPP4R1-228ENST00000584074 A0A1W2PPI3 338 aa17.11■□□□□ 0.33
PPP4R1-228ENST00000584074 AIPO00170 330 aa17.11■□□□□ 0.33
PPP4R1-228ENST00000584074 SLC35A2P78381 396 aa17.11■□□□□ 0.33
PPP4R1-228ENST00000584074 PDLIM3Q53GG5 364 aaPredicted RBP17.11■□□□□ 0.33
PPP4R1-228ENST00000584074 C1QL4Q86Z23 238 aa17.11■□□□□ 0.33
PPP4R1-228ENST00000584074 DRAM1Q8N682 238 aa17.11■□□□□ 0.33
PPP4R1-228ENST00000584074 UQCC2Q9BRT2 126 aa17.11■□□□□ 0.33
PPP4R1-228ENST00000584074 PEX16Q9Y5Y5 336 aa17.11■□□□□ 0.33
PPP4R1-228ENST00000584074 FAM90A18PA6NE21 464 aa17.1■□□□□ 0.33
PPP4R1-228ENST00000584074 FAM90A16PA6NEW6 464 aa17.1■□□□□ 0.33
PPP4R1-228ENST00000584074 FAM90A20PA6NIJ5 464 aa17.1■□□□□ 0.33
PPP4R1-228ENST00000584074 FAM90A9PA6NNJ1 464 aa17.1■□□□□ 0.33
PPP4R1-228ENST00000584074 FAM90A12PA8MX19 464 aa17.1■□□□□ 0.33
PPP4R1-228ENST00000584074 FAM90A5PA8MXJ8 464 aa17.1■□□□□ 0.33
PPP4R1-228ENST00000584074 H0YHG0 523 aa17.1■□□□□ 0.33
PPP4R1-228ENST00000584074 SDCBPO00560 298 aaPredicted RBP17.1■□□□□ 0.33
PPP4R1-228ENST00000584074 ORC5O43913 435 aa17.1■□□□□ 0.33
PPP4R1-228ENST00000584074 OPN1MWP04001 364 aa17.1■□□□□ 0.33
PPP4R1-228ENST00000584074 LPLP06858 475 aa17.1■□□□□ 0.33
PPP4R1-228ENST00000584074 SNRNP70P08621 437 aaKnown RBP17.1■□□□□ 0.33
PPP4R1-228ENST00000584074 FAM90A15PP0C7V4 464 aa17.1■□□□□ 0.33
PPP4R1-228ENST00000584074 FAM90A13PP0C7W8 464 aa17.1■□□□□ 0.33
PPP4R1-228ENST00000584074 FAM90A14PP0C7W9 464 aa17.1■□□□□ 0.33
PPP4R1-228ENST00000584074 FAM90A24PP0C7X0 464 aa17.1■□□□□ 0.33
PPP4R1-228ENST00000584074 FAM106CPP0CH98 169 aa17.1■□□□□ 0.33
PPP4R1-228ENST00000584074 OPN1MW2P0DN77 364 aa17.1■□□□□ 0.33
PPP4R1-228ENST00000584074 OPN1MW3P0DN78 364 aa17.1■□□□□ 0.33
PPP4R1-228ENST00000584074 MYF6P23409 242 aa17.1■□□□□ 0.33
PPP4R1-228ENST00000584074 IRF3Q14653 427 aa17.1■□□□□ 0.33
PPP4R1-228ENST00000584074 MED22Q15528 200 aa17.1■□□□□ 0.33
PPP4R1-228ENST00000584074 FAM46BQ96A09 425 aa17.1■□□□□ 0.33
PPP4R1-228ENST00000584074 Q96M66 194 aa17.1■□□□□ 0.33
PPP4R1-228ENST00000584074 ETAA1Q9NY74 926 aa17.1■□□□□ 0.33
PPP4R1-228ENST00000584074 IGHV3-43A0A0B4J1X8 118 aa17.09■□□□□ 0.33
PPP4R1-228ENST00000584074 ADARB2-AS1A8MUL3 147 aa17.09■□□□□ 0.33
PPP4R1-228ENST00000584074 C12orf77C9JDV5 145 aa17.09■□□□□ 0.33
PPP4R1-228ENST00000584074 IGHV3-43DP0DP04 118 aa17.09■□□□□ 0.33
PPP4R1-228ENST00000584074 RAB7AP51149 207 aa17.09■□□□□ 0.33
PPP4R1-228ENST00000584074 LOXL3P58215 753 aa17.09■□□□□ 0.33
PPP4R1-228ENST00000584074 GPR50Q13585 617 aa17.09■□□□□ 0.33
PPP4R1-228ENST00000584074 SYT6Q5T7P8 510 aaPredicted RBP17.09■□□□□ 0.33
PPP4R1-228ENST00000584074 SIGIRRQ6IA17 410 aa17.09■□□□□ 0.33
PPP4R1-228ENST00000584074 CEACAM19Q7Z692 300 aa17.09■□□□□ 0.33
PPP4R1-228ENST00000584074 LRRTM1Q86UE6 522 aa17.09■□□□□ 0.33
PPP4R1-228ENST00000584074 NDUFA11Q86Y39 141 aa17.09■□□□□ 0.33
PPP4R1-228ENST00000584074 THNSL2Q86YJ6 484 aa17.09■□□□□ 0.33
PPP4R1-228ENST00000584074 OR5AU1Q8NGC0 362 aa17.09■□□□□ 0.33
PPP4R1-228ENST00000584074 OR52M1Q8NGK5 317 aa17.09■□□□□ 0.33
PPP4R1-228ENST00000584074 OR4K15Q8NH41 348 aa17.09■□□□□ 0.33
PPP4R1-228ENST00000584074 DUSP21Q9H596 190 aa17.09■□□□□ 0.33
PPP4R1-228ENST00000584074 GFOD1Q9NXC2 390 aa17.09■□□□□ 0.33
PPP4R1-228ENST00000584074 TRAPPC2LQ9UL33 140 aa17.09■□□□□ 0.33
PPP4R1-228ENST00000584074 FAM90A10PA6NDY2 464 aa17.08■□□□□ 0.32
PPP4R1-228ENST00000584074 FAM90A7PA6NKC0 464 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms