RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 F5H0A9 414 aaPredicted RBP19.15■□□□□ 0.66
CCDC47-204ENST00000582252 GNRHRP30968 328 aa19.15■□□□□ 0.66
CCDC47-204ENST00000582252 KCNJ3P48549 501 aa19.15■□□□□ 0.66
CCDC47-204ENST00000582252 RPS23P62266 143 aaKnown RBP19.15■□□□□ 0.66
CCDC47-204ENST00000582252 COMMD7Q86VX2 200 aa19.15■□□□□ 0.66
CCDC47-204ENST00000582252 GAPTQ8N292 157 aa19.15■□□□□ 0.66
CCDC47-204ENST00000582252 MRPL24Q96A35 216 aaKnown RBP19.15■□□□□ 0.66
CCDC47-204ENST00000582252 VKORC1Q9BQB6 163 aa19.15■□□□□ 0.66
CCDC47-204ENST00000582252 TRAPPC2LQ9UL33 140 aa19.15■□□□□ 0.66
CCDC47-204ENST00000582252 FZR1Q9UM11 496 aa19.15■□□□□ 0.66
CCDC47-204ENST00000582252 TMED3Q9Y3Q3 217 aa19.15■□□□□ 0.66
CCDC47-204ENST00000582252 A8MXE2 369 aa19.14■□□□□ 0.66
CCDC47-204ENST00000582252 H0YIZ8 118 aa19.14■□□□□ 0.66
CCDC47-204ENST00000582252 SP6Q3SY56 376 aa19.14■□□□□ 0.66
CCDC47-204ENST00000582252 BEX5Q5H9J7 111 aa19.14■□□□□ 0.66
CCDC47-204ENST00000582252 C20orf204Q6ZNR8 217 aa19.14■□□□□ 0.66
CCDC47-204ENST00000582252 MRGPRGQ86SM5 289 aa19.14■□□□□ 0.66
CCDC47-204ENST00000582252 OR11L1Q8NGX0 322 aa19.14■□□□□ 0.66
CCDC47-204ENST00000582252 C18orf12Q96KH6 178 aa19.14■□□□□ 0.66
CCDC47-204ENST00000582252 AQP10Q96PS8 301 aa19.14■□□□□ 0.66
CCDC47-204ENST00000582252 SLC25A32Q9H2D1 315 aa19.14■□□□□ 0.66
CCDC47-204ENST00000582252 IGKV1-6A0A0C4DH72 117 aa19.14■□□□□ 0.65
CCDC47-204ENST00000582252 RRASP10301 218 aa19.14■□□□□ 0.65
CCDC47-204ENST00000582252 GLRXP35754 106 aa19.14■□□□□ 0.65
CCDC47-204ENST00000582252 LUMP51884 338 aaPredicted RBP19.14■□□□□ 0.65
CCDC47-204ENST00000582252 SMIM21Q3B7S5 101 aa19.14■□□□□ 0.65
CCDC47-204ENST00000582252 Q6ZR03 302 aa19.14■□□□□ 0.65
CCDC47-204ENST00000582252 LDLRAD3Q86YD5 345 aa19.14■□□□□ 0.65
CCDC47-204ENST00000582252 GLYATL2Q8WU03 294 aa19.14■□□□□ 0.65
CCDC47-204ENST00000582252 MSI2Q96DH6 328 aaKnown RBP19.14■□□□□ 0.65
CCDC47-204ENST00000582252 MED9Q9NWA0 146 aa19.14■□□□□ 0.65
CCDC47-204ENST00000582252 OR2W1Q9Y3N9 320 aa19.14■□□□□ 0.65
CCDC47-204ENST00000582252 ZFYVE26Q68DK2 2539 aa19.14■□□□□ 0.65
CCDC47-204ENST00000582252 TRGV8A0A0C4DH27 118 aa19.13■□□□□ 0.65
CCDC47-204ENST00000582252 ZNF250P15622 560 aa19.13■□□□□ 0.65
CCDC47-204ENST00000582252 RCC1P18754 421 aaPredicted RBP19.13■□□□□ 0.65
CCDC47-204ENST00000582252 LMO1P25800 156 aa19.13■□□□□ 0.65
CCDC47-204ENST00000582252 WDR82Q6UXN9 313 aa19.13■□□□□ 0.65
CCDC47-204ENST00000582252 ACP7Q6ZNF0 438 aa19.13■□□□□ 0.65
CCDC47-204ENST00000582252 TBC1D26Q86UD7 250 aa19.13■□□□□ 0.65
CCDC47-204ENST00000582252 C11orf53Q8IXP5 236 aa19.13■□□□□ 0.65
CCDC47-204ENST00000582252 H1FOOQ8IZA3 346 aaPredicted RBP19.13■□□□□ 0.65
CCDC47-204ENST00000582252 PRR7Q8TB68 274 aa19.13■□□□□ 0.65
CCDC47-204ENST00000582252 MSL2Q9HCI7 577 aa19.13■□□□□ 0.65
CCDC47-204ENST00000582252 OR5AC2Q9NZP5 309 aa19.13■□□□□ 0.65
CCDC47-204ENST00000582252 OR14J1Q9UGF5 321 aa19.13■□□□□ 0.65
CCDC47-204ENST00000582252 WIPI2Q9Y4P8 454 aa19.13■□□□□ 0.65
CCDC47-204ENST00000582252 DUXBA0A1W2PPF3 345 aa19.12■□□□□ 0.65
CCDC47-204ENST00000582252 IGHV3-13P01766 116 aa19.12■□□□□ 0.65
CCDC47-204ENST00000582252 BMP5P22003 454 aa19.12■□□□□ 0.65
CCDC47-204ENST00000582252 CD200P41217 278 aa19.12■□□□□ 0.65
CCDC47-204ENST00000582252 CA7P43166 264 aa19.12■□□□□ 0.65
CCDC47-204ENST00000582252 PRAMEF6Q5VXH4 476 aa19.12■□□□□ 0.65
CCDC47-204ENST00000582252 PDZD9Q8IXQ8 264 aa19.12■□□□□ 0.65
CCDC47-204ENST00000582252 PLPPR1Q8TBJ4 325 aa19.12■□□□□ 0.65
CCDC47-204ENST00000582252 TMEM222Q9H0R3 208 aa19.12■□□□□ 0.65
CCDC47-204ENST00000582252 ELOVL5Q9NYP7 299 aa19.12■□□□□ 0.65
CCDC47-204ENST00000582252 PFDN2Q9UHV9 154 aa19.12■□□□□ 0.65
CCDC47-204ENST00000582252 UBE2J1Q9Y385 318 aaPredicted RBP19.12■□□□□ 0.65
CCDC47-204ENST00000582252 DIDO1Q9BTC0 2240 aaKnown RBP19.12■□□□□ 0.65
CCDC47-204ENST00000582252 A0A0G2JNJ9 132 aa19.11■□□□□ 0.65
CCDC47-204ENST00000582252 hCG_1807616A0A1W2PRN6 198 aa19.11■□□□□ 0.65
CCDC47-204ENST00000582252 TMEM30CPA0ZSE6 113 aa19.11■□□□□ 0.65
CCDC47-204ENST00000582252 ATXN7O15265 892 aaPredicted RBP19.11■□□□□ 0.65
CCDC47-204ENST00000582252 KLF3P57682 345 aaPredicted RBP19.11■□□□□ 0.65
CCDC47-204ENST00000582252 ALKBH2Q6NS38 261 aa19.11■□□□□ 0.65
CCDC47-204ENST00000582252 ZNF818PQ6ZRF7 136 aa19.11■□□□□ 0.65
CCDC47-204ENST00000582252 SSX8Q7RTT4 187 aa19.11■□□□□ 0.65
CCDC47-204ENST00000582252 OR1S1Q8NH92 325 aa19.11■□□□□ 0.65
CCDC47-204ENST00000582252 STOML3Q8TAV4 291 aa19.11■□□□□ 0.65
CCDC47-204ENST00000582252 DMRTA2Q96SC8 542 aa19.11■□□□□ 0.65
CCDC47-204ENST00000582252 MBNL3Q9NUK0 354 aaKnown RBP19.11■□□□□ 0.65
CCDC47-204ENST00000582252 KCNIP1Q9NZI2 227 aa19.11■□□□□ 0.65
CCDC47-204ENST00000582252 Q9UFV3 132 aa19.11■□□□□ 0.65
CCDC47-204ENST00000582252 SMG1Q96Q15 3661 aaKnown RBP19.11■□□□□ 0.65
CCDC47-204ENST00000582252 IGHV3-64DA0A0J9YX35 117 aa19.11■□□□□ 0.65
CCDC47-204ENST00000582252 IFNL4K9M1U5 179 aa19.11■□□□□ 0.65
CCDC47-204ENST00000582252 NMBP08949 121 aa19.11■□□□□ 0.65
CCDC47-204ENST00000582252 TPT1P13693 172 aaKnown RBP19.11■□□□□ 0.65
CCDC47-204ENST00000582252 SELENOVP59797 346 aa19.11■□□□□ 0.65
CCDC47-204ENST00000582252 ZNF826PQ6ZT77 177 aa19.11■□□□□ 0.65
CCDC47-204ENST00000582252 LYZL2Q7Z4W2 148 aa19.11■□□□□ 0.65
CCDC47-204ENST00000582252 OR10Z1Q8NGY1 313 aa19.11■□□□□ 0.65
CCDC47-204ENST00000582252 PCNPQ8WW12 178 aaKnown RBP19.11■□□□□ 0.65
CCDC47-204ENST00000582252 TP53RKQ96S44 253 aa19.11■□□□□ 0.65
CCDC47-204ENST00000582252 SPIN2AQ99865 258 aa19.11■□□□□ 0.65
CCDC47-204ENST00000582252 SPIN2BQ9BPZ2 258 aa19.11■□□□□ 0.65
CCDC47-204ENST00000582252 DUSP13Q9UII6 198 aa19.11■□□□□ 0.65
CCDC47-204ENST00000582252 HSD17B6O14756 317 aa19.1■□□□□ 0.65
CCDC47-204ENST00000582252 TAAR5O14804 337 aa19.1■□□□□ 0.65
CCDC47-204ENST00000582252 DEDDO75618 318 aa19.1■□□□□ 0.65
CCDC47-204ENST00000582252 EIF5AP63241 154 aaKnown RBP19.1■□□□□ 0.65
CCDC47-204ENST00000582252 SLC35E4Q6ICL7 350 aa19.1■□□□□ 0.65
CCDC47-204ENST00000582252 ZNF695Q8IW36 515 aa19.1■□□□□ 0.65
CCDC47-204ENST00000582252 OR2Z1Q8NG97 314 aa19.1■□□□□ 0.65
CCDC47-204ENST00000582252 LILRB1Q8NHL6 650 aaPredicted RBP19.1■□□□□ 0.65
CCDC47-204ENST00000582252 RND1Q92730 232 aa19.1■□□□□ 0.65
CCDC47-204ENST00000582252 MARVELD3Q96A59 401 aa19.1■□□□□ 0.65
CCDC47-204ENST00000582252 TMEM56Q96MV1 263 aa19.1■□□□□ 0.65
CCDC47-204ENST00000582252 SHARPINQ9H0F6 387 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms