RNA–Protein interactions for RNA: ENST00000579640.5

SS18-213, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,840 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-213ENST00000579640 CENPXA8MT69 81 aa8.89□□□□□ -0.99
SS18-213ENST00000579640 A8MXK9 166 aa8.89□□□□□ -0.99
SS18-213ENST00000579640 FABP7O15540 132 aa8.89□□□□□ -0.99
SS18-213ENST00000579640 DIRAS3O95661 229 aa8.89□□□□□ -0.99
SS18-213ENST00000579640 CD74P04233 296 aa8.89□□□□□ -0.99
SS18-213ENST00000579640 CTXN2P0C2S0 81 aa8.89□□□□□ -0.99
SS18-213ENST00000579640 AKAIN1P0CW23 69 aa8.89□□□□□ -0.99
SS18-213ENST00000579640 RCC1P18754 421 aaPredicted RBP8.89□□□□□ -0.99
SS18-213ENST00000579640 GLP1RP43220 463 aa8.89□□□□□ -0.99
SS18-213ENST00000579640 DEFA1P59665 94 aa8.89□□□□□ -0.99
SS18-213ENST00000579640 DEFA3P59666 94 aa8.89□□□□□ -0.99
SS18-213ENST00000579640 ARPC4P59998 168 aa8.89□□□□□ -0.99
SS18-213ENST00000579640 MEF2DQ14814 521 aa8.89□□□□□ -0.99
SS18-213ENST00000579640 HMGN3Q15651 99 aa8.89□□□□□ -0.99
SS18-213ENST00000579640 CHRFAM7AQ494W8 412 aa8.89□□□□□ -0.99
SS18-213ENST00000579640 STEAP3Q658P3 488 aa8.89□□□□□ -0.99
SS18-213ENST00000579640 Q6ZPA2 131 aa8.89□□□□□ -0.99
SS18-213ENST00000579640 LYSMD2Q8IV50 215 aa8.89□□□□□ -0.99
SS18-213ENST00000579640 FGFRL1Q8N441 504 aa8.89□□□□□ -0.99
SS18-213ENST00000579640 OR5AP2Q8NGF4 316 aa8.89□□□□□ -0.99
SS18-213ENST00000579640 OR4A4PQ8NGN8 299 aa8.89□□□□□ -0.99
SS18-213ENST00000579640 OR13A1Q8NGR1 328 aa8.89□□□□□ -0.99
SS18-213ENST00000579640 C8orf46Q8TAG6 207 aa8.89□□□□□ -0.99
SS18-213ENST00000579640 MAFIPQ8WZ33 124 aa8.89□□□□□ -0.99
SS18-213ENST00000579640 TAS2R3Q9NYW6 316 aa8.89□□□□□ -0.99
SS18-213ENST00000579640 NAV2Q8IVL1 2488 aa8.89□□□□□ -0.99
SS18-213ENST00000579640 APCP25054 2843 aa8.89□□□□□ -0.99
SS18-213ENST00000579640 IGHV4-61A0A0C4DH41 118 aa8.88□□□□□ -0.99
SS18-213ENST00000579640 NAP1L6A6NFF2 107 aa8.88□□□□□ -0.99
SS18-213ENST00000579640 ZNF729A6NN14 1252 aaPredicted RBP8.88□□□□□ -0.99
SS18-213ENST00000579640 SPINT2O43291 252 aa8.88□□□□□ -0.99
SS18-213ENST00000579640 FOXH1O75593 365 aa8.88□□□□□ -0.99
SS18-213ENST00000579640 USF1P22415 310 aaPredicted RBP8.88□□□□□ -0.99
SS18-213ENST00000579640 HLA-DMAP28067 261 aa8.88□□□□□ -0.99
SS18-213ENST00000579640 OR3A3P47888 321 aa8.88□□□□□ -0.99
SS18-213ENST00000579640 IFITM3Q01628 133 aa8.88□□□□□ -0.99
SS18-213ENST00000579640 TMEM30BQ3MIR4 351 aa8.88□□□□□ -0.99
SS18-213ENST00000579640 RNASE10Q5GAN6 216 aaKnown RBP8.88□□□□□ -0.99
SS18-213ENST00000579640 OR52W1Q6IF63 320 aa8.88□□□□□ -0.99
SS18-213ENST00000579640 STEAP1BQ6NZ63 245 aa8.88□□□□□ -0.99
SS18-213ENST00000579640 BTN2A1Q7KYR7 527 aa8.88□□□□□ -0.99
SS18-213ENST00000579640 FAM185AQ8N0U4 392 aa8.88□□□□□ -0.99
SS18-213ENST00000579640 OR5H2Q8NGV7 314 aa8.88□□□□□ -0.99
SS18-213ENST00000579640 MRGPRDQ8TDS7 321 aa8.88□□□□□ -0.99
SS18-213ENST00000579640 GAL3ST2Q9H3Q3 398 aa8.88□□□□□ -0.99
SS18-213ENST00000579640 TAF9BQ9HBM6 251 aa8.88□□□□□ -0.99
SS18-213ENST00000579640 C19orf12Q9NSK7 152 aa8.88□□□□□ -0.99
SS18-213ENST00000579640 RPUSD1Q9UJJ7 312 aaKnown RBP8.88□□□□□ -0.99
SS18-213ENST00000579640 DSCAML1Q8TD84 2053 aa8.88□□□□□ -0.99
SS18-213ENST00000579640 DOCK11Q5JSL3 2073 aa8.87□□□□□ -0.99
SS18-213ENST00000579640 LOC105371242A0A075B767 164 aa8.87□□□□□ -0.99
SS18-213ENST00000579640 IGKV1D-8A0A087WSZ0 117 aa8.87□□□□□ -0.99
SS18-213ENST00000579640 C12orf77C9JDV5 145 aa8.87□□□□□ -0.99
SS18-213ENST00000579640 RAB3DO95716 219 aa8.87□□□□□ -0.99
SS18-213ENST00000579640 CD3DP04234 171 aa8.87□□□□□ -0.99
SS18-213ENST00000579640 FCER2P06734 321 aa8.87□□□□□ -0.99
SS18-213ENST00000579640 GSTT2P0CG29 244 aa8.87□□□□□ -0.99
SS18-213ENST00000579640 CGB3P0DN86 165 aa8.87□□□□□ -0.99
SS18-213ENST00000579640 CGB7P0DN87 165 aa8.87□□□□□ -0.99
SS18-213ENST00000579640 HRH1P35367 487 aa8.87□□□□□ -0.99
SS18-213ENST00000579640 SEC61A1P61619 476 aaKnown RBP8.87□□□□□ -0.99
SS18-213ENST00000579640 ASAH1Q13510 395 aa8.87□□□□□ -0.99
SS18-213ENST00000579640 CDK10Q15131 360 aa8.87□□□□□ -0.99
SS18-213ENST00000579640 VAX1Q5SQQ9 334 aa8.87□□□□□ -0.99
SS18-213ENST00000579640 LY6G5BQ8NDX9 201 aa8.87□□□□□ -0.99
SS18-213ENST00000579640 ZNF714Q96N38 554 aa8.87□□□□□ -0.99
SS18-213ENST00000579640 CABLES2Q9BTV7 478 aa8.87□□□□□ -0.99
SS18-213ENST00000579640 LINC00574Q9H8X3 128 aa8.87□□□□□ -0.99
SS18-213ENST00000579640 NECAP2Q9NVZ3 263 aa8.87□□□□□ -0.99
SS18-213ENST00000579640 SETXQ7Z333 2677 aaKnown RBP8.87□□□□□ -0.99
SS18-213ENST00000579640 TACC2O95359 2948 aa8.87□□□□□ -0.99
SS18-213ENST00000579640 TRAV39A0A0B4J263 110 aa8.87□□□□□ -0.99
SS18-213ENST00000579640 KBTBD11-OT1A0A1B0GTJ5 212 aa8.87□□□□□ -0.99
SS18-213ENST00000579640 C15orf65H3BRN8 121 aa8.87□□□□□ -0.99
SS18-213ENST00000579640 PHF1O43189 567 aaPredicted RBP8.87□□□□□ -0.99
SS18-213ENST00000579640 HBZP02008 142 aa8.87□□□□□ -0.99
SS18-213ENST00000579640 IFNA6P05013 189 aa8.87□□□□□ -0.99
SS18-213ENST00000579640 SCTP09683 121 aa8.87□□□□□ -0.99
SS18-213ENST00000579640 IL2RGP31785 369 aa8.87□□□□□ -0.99
SS18-213ENST00000579640 LOXL1Q08397 574 aaPredicted RBP8.87□□□□□ -0.99
SS18-213ENST00000579640 TMEM200BQ69YZ2 307 aa8.87□□□□□ -0.99
SS18-213ENST00000579640 MZT2BQ6NZ67 158 aa8.87□□□□□ -0.99
SS18-213ENST00000579640 TCF23Q7RTU1 214 aa8.87□□□□□ -0.99
SS18-213ENST00000579640 OVCH2Q7RTZ1 564 aa8.87□□□□□ -0.99
SS18-213ENST00000579640 KRTAP1-3Q8IUG1 177 aa8.87□□□□□ -0.99
SS18-213ENST00000579640 ARRDC1Q8N5I2 433 aa8.87□□□□□ -0.99
SS18-213ENST00000579640 OR10A7Q8NGE5 316 aa8.87□□□□□ -0.99
SS18-213ENST00000579640 OR4C16Q8NGL9 310 aa8.87□□□□□ -0.99
SS18-213ENST00000579640 ARL11Q969Q4 196 aa8.87□□□□□ -0.99
SS18-213ENST00000579640 GALMQ96C23 342 aa8.87□□□□□ -0.99
SS18-213ENST00000579640 HRASLSQ9HDD0 168 aa8.87□□□□□ -0.99
SS18-213ENST00000579640 CALYQ9NYX4 217 aa8.87□□□□□ -0.99
SS18-213ENST00000579640 POLR3KQ9Y2Y1 108 aaPredicted RBP8.87□□□□□ -0.99
SS18-213ENST00000579640 POLQO75417 2590 aa8.86□□□□□ -0.99
SS18-213ENST00000579640 MALRD1Q5VYJ5 2156 aa8.86□□□□□ -0.99
SS18-213ENST00000579640 A0A096LNT2 108 aa8.86□□□□□ -0.99
SS18-213ENST00000579640 PPIAL4CA0A0B4J2A2 164 aa8.86□□□□□ -0.99
SS18-213ENST00000579640 KIAA1324LA8MWY0 1029 aaPredicted RBP8.86□□□□□ -0.99
SS18-213ENST00000579640 DISC1C4P0D8 188 aa8.86□□□□□ -0.99
SS18-213ENST00000579640 NPIPB11E5RHQ5 1161 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms