RNA–Protein interactions for RNA: ENST00000578904.1

CSNK1D-209, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 1,269 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-209ENST00000578904 HDHD3Q9BSH5 251 aaPredicted RBP11.6□□□□□ -0.55
CSNK1D-209ENST00000578904 BPESC1Q9GZL8 116 aa11.6□□□□□ -0.55
CSNK1D-209ENST00000578904 SLC25A10Q9UBX3 287 aaPredicted RBP11.6□□□□□ -0.55
CSNK1D-209ENST00000578904 OPN4Q9UHM6 478 aa11.6□□□□□ -0.55
CSNK1D-209ENST00000578904 ZNF230Q9UIE0 474 aaPredicted RBP11.6□□□□□ -0.55
CSNK1D-209ENST00000578904 MAB21L2Q9Y586 359 aa11.6□□□□□ -0.55
CSNK1D-209ENST00000578904 AKAP9Q99996 3911 aa11.59□□□□□ -0.55
CSNK1D-209ENST00000578904 PMP2P02689 132 aa11.59□□□□□ -0.55
CSNK1D-209ENST00000578904 FCER2P06734 321 aa11.59□□□□□ -0.55
CSNK1D-209ENST00000578904 NDUFB7P17568 137 aa11.59□□□□□ -0.55
CSNK1D-209ENST00000578904 GIFP27352 417 aa11.59□□□□□ -0.55
CSNK1D-209ENST00000578904 SLC6A1P30531 599 aa11.59□□□□□ -0.55
CSNK1D-209ENST00000578904 P2RX3P56373 397 aa11.59□□□□□ -0.55
CSNK1D-209ENST00000578904 EDDM3BP56851 147 aa11.59□□□□□ -0.55
CSNK1D-209ENST00000578904 HLA-DRB3P79483 266 aa11.59□□□□□ -0.55
CSNK1D-209ENST00000578904 MEF2CQ06413 473 aaPredicted RBP11.59□□□□□ -0.55
CSNK1D-209ENST00000578904 AESQ08117 197 aa11.59□□□□□ -0.55
CSNK1D-209ENST00000578904 EDDM3AQ14507 147 aa11.59□□□□□ -0.55
CSNK1D-209ENST00000578904 RBMS2Q15434 407 aaKnown RBP11.59□□□□□ -0.55
CSNK1D-209ENST00000578904 AVPI1Q5T686 147 aa11.59□□□□□ -0.55
CSNK1D-209ENST00000578904 ZNF880Q6PDB4 577 aa11.59□□□□□ -0.55
CSNK1D-209ENST00000578904 RTN4RL2Q86UN3 420 aa11.59□□□□□ -0.55
CSNK1D-209ENST00000578904 DUSP18Q8NEJ0 188 aa11.59□□□□□ -0.55
CSNK1D-209ENST00000578904 WFDC11Q8NEX6 87 aa11.59□□□□□ -0.55
CSNK1D-209ENST00000578904 OR8B3Q8NGG8 313 aa11.59□□□□□ -0.55
CSNK1D-209ENST00000578904 OR6F1Q8NGZ6 308 aa11.59□□□□□ -0.55
CSNK1D-209ENST00000578904 PLPPR1Q8TBJ4 325 aa11.59□□□□□ -0.55
CSNK1D-209ENST00000578904 OR8B2Q96RD0 313 aa11.59□□□□□ -0.55
CSNK1D-209ENST00000578904 SLC25A21Q9BQT8 299 aaPredicted RBP11.59□□□□□ -0.55
CSNK1D-209ENST00000578904 SHARPINQ9H0F6 387 aa11.59□□□□□ -0.55
CSNK1D-209ENST00000578904 MBNL3Q9NUK0 354 aaKnown RBP11.59□□□□□ -0.55
CSNK1D-209ENST00000578904 ING3Q9NXR8 418 aa11.59□□□□□ -0.55
CSNK1D-209ENST00000578904 EHFQ9NZC4 300 aa11.59□□□□□ -0.55
CSNK1D-209ENST00000578904 KIF25Q9UIL4 384 aa11.59□□□□□ -0.55
CSNK1D-209ENST00000578904 PRRC2AP48634 2157 aaKnown RBP11.58□□□□□ -0.56
CSNK1D-209ENST00000578904 YLPM1P49750 1951 aaKnown RBP11.58□□□□□ -0.56
CSNK1D-209ENST00000578904 TRGV10A0A0A0MS01 117 aa11.58□□□□□ -0.56
CSNK1D-209ENST00000578904 A0A1W2PPH5 198 aa11.58□□□□□ -0.56
CSNK1D-209ENST00000578904 hADV38S2A0JD32 116 aa11.58□□□□□ -0.56
CSNK1D-209ENST00000578904 ODAMA1E959 279 aa11.58□□□□□ -0.56
CSNK1D-209ENST00000578904 FABP7O15540 132 aa11.58□□□□□ -0.56
CSNK1D-209ENST00000578904 SPINT2O43291 252 aa11.58□□□□□ -0.56
CSNK1D-209ENST00000578904 RPS2P15880 293 aaKnown RBP11.58□□□□□ -0.56
CSNK1D-209ENST00000578904 SLC25A16P16260 332 aa11.58□□□□□ -0.56
CSNK1D-209ENST00000578904 HOXA4Q00056 320 aaPredicted RBP11.58□□□□□ -0.56
CSNK1D-209ENST00000578904 OXA1LQ15070 435 aa11.58□□□□□ -0.56
CSNK1D-209ENST00000578904 C11orf91Q3C1V1 193 aa11.58□□□□□ -0.56
CSNK1D-209ENST00000578904 TMEM30BQ3MIR4 351 aa11.58□□□□□ -0.56
CSNK1D-209ENST00000578904 NRARPQ7Z6K4 114 aa11.58□□□□□ -0.56
CSNK1D-209ENST00000578904 CENPSQ8N2Z9 138 aa11.58□□□□□ -0.56
CSNK1D-209ENST00000578904 CCDC107Q8WV48 283 aa11.58□□□□□ -0.56
CSNK1D-209ENST00000578904 SNAPC3Q92966 411 aa11.58□□□□□ -0.56
CSNK1D-209ENST00000578904 GALMQ96C23 342 aa11.58□□□□□ -0.56
CSNK1D-209ENST00000578904 NEIL1Q96FI4 390 aaPredicted RBP11.58□□□□□ -0.56
CSNK1D-209ENST00000578904 GINS4Q9BRT9 223 aa11.58□□□□□ -0.56
CSNK1D-209ENST00000578904 SLC2A8Q9NY64 477 aa11.58□□□□□ -0.56
CSNK1D-209ENST00000578904 METRNQ9UJH8 293 aa11.58□□□□□ -0.56
CSNK1D-209ENST00000578904 NUBP2Q9Y5Y2 271 aa11.58□□□□□ -0.56
CSNK1D-209ENST00000578904 VWC2LB2RUY7 222 aa11.57□□□□□ -0.56
CSNK1D-209ENST00000578904 M0QYG6 137 aa11.57□□□□□ -0.56
CSNK1D-209ENST00000578904 TNFRSF13BO14836 293 aaPredicted RBP11.57□□□□□ -0.56
CSNK1D-209ENST00000578904 HEXAP06865 529 aa11.57□□□□□ -0.56
CSNK1D-209ENST00000578904 OR5H8P0DN80 308 aa11.57□□□□□ -0.56
CSNK1D-209ENST00000578904 IL2RGP31785 369 aa11.57□□□□□ -0.56
CSNK1D-209ENST00000578904 RFX2P48378 723 aa11.57□□□□□ -0.56
CSNK1D-209ENST00000578904 SCGB2B2Q4G0G5 96 aa11.57□□□□□ -0.56
CSNK1D-209ENST00000578904 CCBE1Q6UXH8 406 aaPredicted RBP11.57□□□□□ -0.56
CSNK1D-209ENST00000578904 OVCH2Q7RTZ1 564 aa11.57□□□□□ -0.56
CSNK1D-209ENST00000578904 FAM216BQ8N7L0 139 aa11.57□□□□□ -0.56
CSNK1D-209ENST00000578904 OR51S1Q8NGJ8 323 aa11.57□□□□□ -0.56
CSNK1D-209ENST00000578904 OR10J5Q8NHC4 309 aa11.57□□□□□ -0.56
CSNK1D-209ENST00000578904 MAFIPQ8WZ33 124 aa11.57□□□□□ -0.56
CSNK1D-209ENST00000578904 CREB3L1Q96BA8 519 aa11.57□□□□□ -0.56
CSNK1D-209ENST00000578904 RAB39BQ96DA2 213 aa11.57□□□□□ -0.56
CSNK1D-209ENST00000578904 COQ2Q96H96 371 aa11.57□□□□□ -0.56
CSNK1D-209ENST00000578904 TINAGL1Q9GZM7 467 aaPredicted RBP11.57□□□□□ -0.56
CSNK1D-209ENST00000578904 NARFLQ9H6Q4 476 aa11.57□□□□□ -0.56
CSNK1D-209ENST00000578904 SLC23A1Q9UHI7 598 aa11.57□□□□□ -0.56
CSNK1D-209ENST00000578904 C2CD3Q4AC94 2353 aa11.57□□□□□ -0.56
CSNK1D-209ENST00000578904 TRBV23-1A0A0A0MS06 115 aa11.56□□□□□ -0.56
CSNK1D-209ENST00000578904 CEACAM18A8MTB9 384 aa11.56□□□□□ -0.56
CSNK1D-209ENST00000578904 DVL1O14640 695 aa11.56□□□□□ -0.56
CSNK1D-209ENST00000578904 HSPA12AO43301 675 aa11.56□□□□□ -0.56
CSNK1D-209ENST00000578904 DHFRP00374 187 aa11.56□□□□□ -0.56
CSNK1D-209ENST00000578904 TCRBP04435 133 aa11.56□□□□□ -0.56
CSNK1D-209ENST00000578904 GSTT2P0CG29 244 aa11.56□□□□□ -0.56
CSNK1D-209ENST00000578904 GLIPR1P48060 266 aa11.56□□□□□ -0.56
CSNK1D-209ENST00000578904 RAG2P55895 527 aa11.56□□□□□ -0.56
CSNK1D-209ENST00000578904 SEC61A1P61619 476 aaKnown RBP11.56□□□□□ -0.56
CSNK1D-209ENST00000578904 HMGN3Q15651 99 aa11.56□□□□□ -0.56
CSNK1D-209ENST00000578904 LPCAT3Q6P1A2 487 aa11.56□□□□□ -0.56
CSNK1D-209ENST00000578904 IDO2Q6ZQW0 420 aa11.56□□□□□ -0.56
CSNK1D-209ENST00000578904 BTN2A1Q7KYR7 527 aa11.56□□□□□ -0.56
CSNK1D-209ENST00000578904 OR56B4Q8NH76 319 aa11.56□□□□□ -0.56
CSNK1D-209ENST00000578904 TERB2Q8NHR7 220 aa11.56□□□□□ -0.56
CSNK1D-209ENST00000578904 GAL3ST2Q9H3Q3 398 aa11.56□□□□□ -0.56
CSNK1D-209ENST00000578904 TAF9BQ9HBM6 251 aa11.56□□□□□ -0.56
CSNK1D-209ENST00000578904 TAS2R3Q9NYW6 316 aa11.56□□□□□ -0.56
CSNK1D-209ENST00000578904 UBE2J1Q9Y385 318 aaPredicted RBP11.56□□□□□ -0.56
CSNK1D-209ENST00000578904 ZNF729A6NN14 1252 aaPredicted RBP11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms