RNA–Protein interactions for RNA: ENST00000575194.5

SPNS3-204, Transcript of sphingolipid transporter 3 (putative), humanhuman

TSL 1 (best)

Gene SPNS3, Length 1,721 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS3-204ENST00000575194 S100PBPQ96BU1 408 aa15.83■□□□□ 0.13
SPNS3-204ENST00000575194 OR5AC2Q9NZP5 309 aa15.83■□□□□ 0.13
SPNS3-204ENST00000575194 PFDN2Q9UHV9 154 aa15.83■□□□□ 0.13
SPNS3-204ENST00000575194 TMED3Q9Y3Q3 217 aa15.83■□□□□ 0.13
SPNS3-204ENST00000575194 A0A1B0GWJ7 208 aa15.82■□□□□ 0.12
SPNS3-204ENST00000575194 PRRG2O14669 202 aa15.82■□□□□ 0.12
SPNS3-204ENST00000575194 HAND1O96004 215 aa15.82■□□□□ 0.12
SPNS3-204ENST00000575194 KCNJ3P48549 501 aa15.82■□□□□ 0.12
SPNS3-204ENST00000575194 FABP6P51161 128 aa15.82■□□□□ 0.12
SPNS3-204ENST00000575194 ZNF83P51522 516 aa15.82■□□□□ 0.12
SPNS3-204ENST00000575194 SP6Q3SY56 376 aa15.82■□□□□ 0.12
SPNS3-204ENST00000575194 LDLRAD3Q86YD5 345 aa15.82■□□□□ 0.12
SPNS3-204ENST00000575194 CMTM1Q8IZ96 169 aa15.82■□□□□ 0.12
SPNS3-204ENST00000575194 GAPTQ8N292 157 aa15.82■□□□□ 0.12
SPNS3-204ENST00000575194 OR11L1Q8NGX0 322 aa15.82■□□□□ 0.12
SPNS3-204ENST00000575194 PCNPQ8WW12 178 aaKnown RBP15.82■□□□□ 0.12
SPNS3-204ENST00000575194 MSI2Q96DH6 328 aaKnown RBP15.82■□□□□ 0.12
SPNS3-204ENST00000575194 hCG_1807616A0A1W2PRN6 198 aa15.82■□□□□ 0.12
SPNS3-204ENST00000575194 A6NLC8 198 aa15.82■□□□□ 0.12
SPNS3-204ENST00000575194 TPT1P13693 172 aaKnown RBP15.82■□□□□ 0.12
SPNS3-204ENST00000575194 GNRHRP30968 328 aa15.82■□□□□ 0.12
SPNS3-204ENST00000575194 IGFBP7Q16270 282 aa15.82■□□□□ 0.12
SPNS3-204ENST00000575194 GLYATL2Q8WU03 294 aa15.82■□□□□ 0.12
SPNS3-204ENST00000575194 BBC3Q96PG8 261 aaPredicted RBP15.82■□□□□ 0.12
SPNS3-204ENST00000575194 TAAR3PQ9P1P4 343 aa15.82■□□□□ 0.12
SPNS3-204ENST00000575194 INTS1Q8N201 2190 aaKnown RBP15.81■□□□□ 0.12
SPNS3-204ENST00000575194 RELNP78509 3460 aa15.81■□□□□ 0.12
SPNS3-204ENST00000575194 IGKV1-6A0A0C4DH72 117 aa15.81■□□□□ 0.12
SPNS3-204ENST00000575194 DUXBA0A1W2PPF3 345 aa15.81■□□□□ 0.12
SPNS3-204ENST00000575194 M0R1B8 84 aa15.81■□□□□ 0.12
SPNS3-204ENST00000575194 CRYAAP02489 173 aa15.81■□□□□ 0.12
SPNS3-204ENST00000575194 GLI4P10075 376 aa15.81■□□□□ 0.12
SPNS3-204ENST00000575194 RPS23P62266 143 aaKnown RBP15.81■□□□□ 0.12
SPNS3-204ENST00000575194 C20orf204Q6ZNR8 217 aa15.81■□□□□ 0.12
SPNS3-204ENST00000575194 TBC1D26Q86UD7 250 aa15.81■□□□□ 0.12
SPNS3-204ENST00000575194 H1FOOQ8IZA3 346 aaPredicted RBP15.81■□□□□ 0.12
SPNS3-204ENST00000575194 RPRMLQ8N4K4 120 aa15.81■□□□□ 0.12
SPNS3-204ENST00000575194 OR1S1Q8NH92 325 aa15.81■□□□□ 0.12
SPNS3-204ENST00000575194 SHARPINQ9H0F6 387 aa15.81■□□□□ 0.12
SPNS3-204ENST00000575194 TMEM222Q9H0R3 208 aa15.81■□□□□ 0.12
SPNS3-204ENST00000575194 TRAPPC2LQ9UL33 140 aa15.81■□□□□ 0.12
SPNS3-204ENST00000575194 UBE2J1Q9Y385 318 aaPredicted RBP15.81■□□□□ 0.12
SPNS3-204ENST00000575194 OR2W1Q9Y3N9 320 aa15.81■□□□□ 0.12
SPNS3-204ENST00000575194 SESN1Q9Y6P5 492 aa15.81■□□□□ 0.12
SPNS3-204ENST00000575194 TAAR5O14804 337 aa15.8■□□□□ 0.12
SPNS3-204ENST00000575194 DEDDO75618 318 aa15.8■□□□□ 0.12
SPNS3-204ENST00000575194 EIF5AP63241 154 aaKnown RBP15.8■□□□□ 0.12
SPNS3-204ENST00000575194 SMIM21Q3B7S5 101 aa15.8■□□□□ 0.12
SPNS3-204ENST00000575194 Q6ZR03 302 aa15.8■□□□□ 0.12
SPNS3-204ENST00000575194 DOLPP1Q86YN1 238 aa15.8■□□□□ 0.12
SPNS3-204ENST00000575194 ST6GALNAC3Q8NDV1 305 aa15.8■□□□□ 0.12
SPNS3-204ENST00000575194 PRR7Q8TB68 274 aa15.8■□□□□ 0.12
SPNS3-204ENST00000575194 RRNAD1Q96FB5 475 aaKnown RBP15.8■□□□□ 0.12
SPNS3-204ENST00000575194 SPIN2AQ99865 258 aa15.8■□□□□ 0.12
SPNS3-204ENST00000575194 SPIN2BQ9BPZ2 258 aa15.8■□□□□ 0.12
SPNS3-204ENST00000575194 USB1Q9BQ65 265 aaKnown RBP15.8■□□□□ 0.12
SPNS3-204ENST00000575194 TMEM30CPA0ZSE6 113 aa15.8■□□□□ 0.12
SPNS3-204ENST00000575194 RCC1P18754 421 aaPredicted RBP15.8■□□□□ 0.12
SPNS3-204ENST00000575194 AANATQ16613 207 aa15.8■□□□□ 0.12
SPNS3-204ENST00000575194 ZNF818PQ6ZRF7 136 aa15.8■□□□□ 0.12
SPNS3-204ENST00000575194 ANGPTL6Q8NI99 470 aa15.8■□□□□ 0.12
SPNS3-204ENST00000575194 PLPPR1Q8TBJ4 325 aa15.8■□□□□ 0.12
SPNS3-204ENST00000575194 LRRC20Q8TCA0 184 aa15.8■□□□□ 0.12
SPNS3-204ENST00000575194 TP53RKQ96S44 253 aa15.8■□□□□ 0.12
SPNS3-204ENST00000575194 PLEKHA2Q9HB19 425 aa15.8■□□□□ 0.12
SPNS3-204ENST00000575194 ZC4H2Q9NQZ6 224 aa15.8■□□□□ 0.12
SPNS3-204ENST00000575194 FZR1Q9UM11 496 aa15.8■□□□□ 0.12
SPNS3-204ENST00000575194 WIPI2Q9Y4P8 454 aa15.8■□□□□ 0.12
SPNS3-204ENST00000575194 ZNF250P15622 560 aa15.79■□□□□ 0.12
SPNS3-204ENST00000575194 LMO1P25800 156 aa15.79■□□□□ 0.12
SPNS3-204ENST00000575194 CD200P41217 278 aa15.79■□□□□ 0.12
SPNS3-204ENST00000575194 SNTB1Q13884 538 aaKnown RBP15.79■□□□□ 0.12
SPNS3-204ENST00000575194 TOR2AQ5JU69 321 aa15.79■□□□□ 0.12
SPNS3-204ENST00000575194 WDR82Q6UXN9 313 aa15.79■□□□□ 0.12
SPNS3-204ENST00000575194 ACP7Q6ZNF0 438 aa15.79■□□□□ 0.12
SPNS3-204ENST00000575194 LYZL2Q7Z4W2 148 aa15.79■□□□□ 0.12
SPNS3-204ENST00000575194 C11orf53Q8IXP5 236 aa15.79■□□□□ 0.12
SPNS3-204ENST00000575194 TMEM56Q96MV1 263 aa15.79■□□□□ 0.12
SPNS3-204ENST00000575194 MBNL3Q9NUK0 354 aaKnown RBP15.79■□□□□ 0.12
SPNS3-204ENST00000575194 KCNIP1Q9NZI2 227 aa15.79■□□□□ 0.12
SPNS3-204ENST00000575194 OR14J1Q9UGF5 321 aa15.79■□□□□ 0.12
SPNS3-204ENST00000575194 TMEM56-RWDD3S4R434 201 aa15.79■□□□□ 0.12
SPNS3-204ENST00000575194 IGKV1D-13A0A0B4J2D9 117 aa15.78■□□□□ 0.12
SPNS3-204ENST00000575194 I3L521 148 aa15.78■□□□□ 0.12
SPNS3-204ENST00000575194 K7EPK0 472 aa15.78■□□□□ 0.12
SPNS3-204ENST00000575194 CDS2O95674 445 aa15.78■□□□□ 0.12
SPNS3-204ENST00000575194 SCGB1D2O95969 90 aa15.78■□□□□ 0.12
SPNS3-204ENST00000575194 IGKV1-13P0DP09 117 aa15.78■□□□□ 0.12
SPNS3-204ENST00000575194 GLRXP35754 106 aa15.78■□□□□ 0.12
SPNS3-204ENST00000575194 RBPJQ06330 500 aa15.78■□□□□ 0.12
SPNS3-204ENST00000575194 HMGN3Q15651 99 aa15.78■□□□□ 0.12
SPNS3-204ENST00000575194 PRAMEF6Q5VXH4 476 aa15.78■□□□□ 0.12
SPNS3-204ENST00000575194 TMEM268Q5VZI3 342 aa15.78■□□□□ 0.12
SPNS3-204ENST00000575194 MEX3BQ6ZN04 569 aaKnown RBP15.78■□□□□ 0.12
SPNS3-204ENST00000575194 MRGPRGQ86SM5 289 aa15.78■□□□□ 0.12
SPNS3-204ENST00000575194 ZNF695Q8IW36 515 aa15.78■□□□□ 0.12
SPNS3-204ENST00000575194 FOXRED2Q8IWF2 684 aa15.78■□□□□ 0.12
SPNS3-204ENST00000575194 FAM71E2Q8N5Q1 922 aa15.78■□□□□ 0.12
SPNS3-204ENST00000575194 LILRB1Q8NHL6 650 aaPredicted RBP15.78■□□□□ 0.12
SPNS3-204ENST00000575194 RBPMSQ93062 196 aaKnown RBP15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms