RNA–Protein interactions for RNA: ENST00000574933.1

CCDC40-213, Transcript of coiled-coil domain containing 40, humanhuman

TSL 3

Gene CCDC40, Length 326 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-213ENST00000574933 TOX4O94842 621 aa14.91□□□□□ -0.02
CCDC40-213ENST00000574933 MNDAP41218 407 aa14.91□□□□□ -0.02
CCDC40-213ENST00000574933 C17orf58Q2M2W7 97 aa14.91□□□□□ -0.02
CCDC40-213ENST00000574933 HACD4Q5VWC8 232 aa14.91□□□□□ -0.02
CCDC40-213ENST00000574933 HEPN1Q6WQI6 88 aa14.91□□□□□ -0.02
CCDC40-213ENST00000574933 Q6ZPA2 131 aa14.91□□□□□ -0.02
CCDC40-213ENST00000574933 MOB1BQ7L9L4 216 aa14.91□□□□□ -0.02
CCDC40-213ENST00000574933 TRAPPC6BQ86SZ2 158 aa14.91□□□□□ -0.02
CCDC40-213ENST00000574933 TNFRSF14Q92956 283 aa14.91□□□□□ -0.02
CCDC40-213ENST00000574933 CMSS1Q9BQ75 279 aaKnown RBP14.91□□□□□ -0.02
CCDC40-213ENST00000574933 DCUN1D5Q9BTE7 237 aa14.91□□□□□ -0.02
CCDC40-213ENST00000574933 MMP27Q9H306 513 aa14.91□□□□□ -0.02
CCDC40-213ENST00000574933 C12orf4Q9NQ89 552 aa14.91□□□□□ -0.02
CCDC40-213ENST00000574933 TRAV18A0A075B6X5 111 aa14.9□□□□□ -0.02
CCDC40-213ENST00000574933 C15orf65H3BRN8 121 aa14.9□□□□□ -0.02
CCDC40-213ENST00000574933 CD3GP09693 182 aa14.9□□□□□ -0.02
CCDC40-213ENST00000574933 GLP1RP43220 463 aa14.9□□□□□ -0.02
CCDC40-213ENST00000574933 FAM120AOSQ5T036 256 aa14.9□□□□□ -0.02
CCDC40-213ENST00000574933 C6orf183Q5T699 404 aa14.9□□□□□ -0.02
CCDC40-213ENST00000574933 OR10A7Q8NGE5 316 aa14.9□□□□□ -0.02
CCDC40-213ENST00000574933 OR4K15Q8NH41 348 aa14.9□□□□□ -0.02
CCDC40-213ENST00000574933 MCFD2Q8NI22 146 aa14.9□□□□□ -0.02
CCDC40-213ENST00000574933 MRGPRDQ8TDS7 321 aa14.9□□□□□ -0.02
CCDC40-213ENST00000574933 AUNIPQ9H7T9 357 aa14.9□□□□□ -0.02
CCDC40-213ENST00000574933 CALYQ9NYX4 217 aa14.9□□□□□ -0.02
CCDC40-213ENST00000574933 TRAPPC2LQ9UL33 140 aa14.9□□□□□ -0.02
CCDC40-213ENST00000574933 MGAT4AQ9UM21 535 aa14.9□□□□□ -0.02
CCDC40-213ENST00000574933 TMEM235A6NFC5 223 aa14.89□□□□□ -0.03
CCDC40-213ENST00000574933 CLPXO76031 633 aa14.89□□□□□ -0.03
CCDC40-213ENST00000574933 IGHV1-8P0DP01 117 aa14.89□□□□□ -0.03
CCDC40-213ENST00000574933 RCC1P18754 421 aaPredicted RBP14.89□□□□□ -0.03
CCDC40-213ENST00000574933 ERVFRD-1P60508 538 aa14.89□□□□□ -0.03
CCDC40-213ENST00000574933 PITPNAQ00169 270 aa14.89□□□□□ -0.03
CCDC40-213ENST00000574933 SRSF7Q16629 238 aaKnown RBP eCLIP14.89□□□□□ -0.03
CCDC40-213ENST00000574933 VMO1Q7Z5L0 202 aa14.89□□□□□ -0.03
CCDC40-213ENST00000574933 CCDC107Q8WV48 283 aa14.89□□□□□ -0.03
CCDC40-213ENST00000574933 HDHD3Q9BSH5 251 aaPredicted RBP14.89□□□□□ -0.03
CCDC40-213ENST00000574933 ZMAT3Q9HA38 289 aaKnown RBP14.89□□□□□ -0.03
CCDC40-213ENST00000574933 ADAM30Q9UKF2 790 aa14.89□□□□□ -0.03
CCDC40-213ENST00000574933 MXRA5Q9NR99 2828 aa14.89□□□□□ -0.03
CCDC40-213ENST00000574933 TRAV39A0A0B4J263 110 aa14.88□□□□□ -0.03
CCDC40-213ENST00000574933 MEX3AA1L020 520 aaKnown RBP14.88□□□□□ -0.03
CCDC40-213ENST00000574933 DTYMKP23919 212 aa14.88□□□□□ -0.03
CCDC40-213ENST00000574933 TAS2R20P59543 309 aa14.88□□□□□ -0.03
CCDC40-213ENST00000574933 HMGN3Q15651 99 aa14.88□□□□□ -0.03
CCDC40-213ENST00000574933 KLF17Q5JT82 389 aaPredicted RBP14.88□□□□□ -0.03
CCDC40-213ENST00000574933 TMEM69Q5SWH9 247 aa14.88□□□□□ -0.03
CCDC40-213ENST00000574933 NCR3LG1Q68D85 454 aa14.88□□□□□ -0.03
CCDC40-213ENST00000574933 HCP5Q6MZN7 132 aa14.88□□□□□ -0.03
CCDC40-213ENST00000574933 Q6ZS49 121 aa14.88□□□□□ -0.03
CCDC40-213ENST00000574933 LAX1Q8IWV1 398 aa14.88□□□□□ -0.03
CCDC40-213ENST00000574933 PCGF1Q9BSM1 259 aa14.88□□□□□ -0.03
CCDC40-213ENST00000574933 Q9N2K0 584 aa14.88□□□□□ -0.03
CCDC40-213ENST00000574933 RAB9BQ9NP90 201 aa14.88□□□□□ -0.03
CCDC40-213ENST00000574933 ELF5Q9UKW6 265 aaPredicted RBP14.88□□□□□ -0.03
CCDC40-213ENST00000574933 SESN1Q9Y6P5 492 aa14.88□□□□□ -0.03
CCDC40-213ENST00000574933 A0A087X0M5 115 aa14.87□□□□□ -0.03
CCDC40-213ENST00000574933 A0A1B0GX30 115 aa14.87□□□□□ -0.03
CCDC40-213ENST00000574933 FAM25AB3EWG3 89 aa14.87□□□□□ -0.03
CCDC40-213ENST00000574933 FAM25CB3EWG5 89 aa14.87□□□□□ -0.03
CCDC40-213ENST00000574933 FAM25GB3EWG6 89 aa14.87□□□□□ -0.03
CCDC40-213ENST00000574933 C12orf77C9JDV5 145 aa14.87□□□□□ -0.03
CCDC40-213ENST00000574933 F2RL2O00254 374 aa14.87□□□□□ -0.03
CCDC40-213ENST00000574933 MMP23AO75900 390 aa14.87□□□□□ -0.03
CCDC40-213ENST00000574933 HLA-DQB1P01920 261 aa14.87□□□□□ -0.03
CCDC40-213ENST00000574933 FCGR3AP08637 254 aa14.87□□□□□ -0.03
CCDC40-213ENST00000574933 HOXB4P17483 251 aaPredicted RBP14.87□□□□□ -0.03
CCDC40-213ENST00000574933 CD34P28906 385 aa14.87□□□□□ -0.03
CCDC40-213ENST00000574933 MRPS15P82914 257 aaKnown RBP14.87□□□□□ -0.03
CCDC40-213ENST00000574933 ARFRP1Q13795 201 aa14.87□□□□□ -0.03
CCDC40-213ENST00000574933 TMEM30BQ3MIR4 351 aa14.87□□□□□ -0.03
CCDC40-213ENST00000574933 OR52W1Q6IF63 320 aa14.87□□□□□ -0.03
CCDC40-213ENST00000574933 OR52M1Q8NGK5 317 aa14.87□□□□□ -0.03
CCDC40-213ENST00000574933 NANPQ8TBE9 248 aa14.87□□□□□ -0.03
CCDC40-213ENST00000574933 KIRREL1Q96J84 757 aa14.87□□□□□ -0.03
CCDC40-213ENST00000574933 C6orf62Q9GZU0 229 aaPredicted RBP14.87□□□□□ -0.03
CCDC40-213ENST00000574933 HEXA-AS1Q9H8Q6 139 aa14.87□□□□□ -0.03
CCDC40-213ENST00000574933 CHMP1AQ9HD42 196 aaPredicted RBP14.87□□□□□ -0.03
CCDC40-213ENST00000574933 SIRT7Q9NRC8 400 aa14.87□□□□□ -0.03
CCDC40-213ENST00000574933 IDI2-AS1Q9NZ38 188 aa14.87□□□□□ -0.03
CCDC40-213ENST00000574933 KCNIP1Q9NZI2 227 aa14.87□□□□□ -0.03
CCDC40-213ENST00000574933 RABL2AQ9UBK7 228 aaPredicted RBP14.87□□□□□ -0.03
CCDC40-213ENST00000574933 RABL2BQ9UNT1 228 aa14.87□□□□□ -0.03
CCDC40-213ENST00000574933 RNASEK-C17orf49H0YIS7 233 aa14.86□□□□□ -0.03
CCDC40-213ENST00000574933 RGS5O15539 181 aa14.86□□□□□ -0.03
CCDC40-213ENST00000574933 SSX5O60225 188 aa14.86□□□□□ -0.03
CCDC40-213ENST00000574933 HNF1AP20823 631 aa14.86□□□□□ -0.03
CCDC40-213ENST00000574933 SSTR5P35346 364 aa14.86□□□□□ -0.03
CCDC40-213ENST00000574933 GDNFP39905 211 aa14.86□□□□□ -0.03
CCDC40-213ENST00000574933 GNG2P59768 71 aa14.86□□□□□ -0.03
CCDC40-213ENST00000574933 BPIFB3P59826 476 aa14.86□□□□□ -0.03
CCDC40-213ENST00000574933 IZUMO1Q8IYV9 350 aa14.86□□□□□ -0.03
CCDC40-213ENST00000574933 ARL11Q969Q4 196 aa14.86□□□□□ -0.03
CCDC40-213ENST00000574933 TAF9BQ9HBM6 251 aa14.86□□□□□ -0.03
CCDC40-213ENST00000574933 EXTL2Q9UBQ6 330 aa14.86□□□□□ -0.03
CCDC40-213ENST00000574933 CDC42EP3Q9UKI2 254 aa14.86□□□□□ -0.03
CCDC40-213ENST00000574933 CENPVL3A0A0U1RRI6 287 aa14.85□□□□□ -0.03
CCDC40-213ENST00000574933 SPINT2O43291 252 aa14.85□□□□□ -0.03
CCDC40-213ENST00000574933 HBZP02008 142 aa14.85□□□□□ -0.03
CCDC40-213ENST00000574933 FPR2P25090 351 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms