RNA–Protein interactions for RNA: ENST00000574867.5

NUP88-210, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 2,081 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-210ENST00000574867 C17orf98A8MV24 154 aa14.04□□□□□ -0.16
NUP88-210ENST00000574867 TOX4O94842 621 aa14.04□□□□□ -0.16
NUP88-210ENST00000574867 MMP9P14780 707 aa14.04□□□□□ -0.16
NUP88-210ENST00000574867 MNDAP41218 407 aa14.04□□□□□ -0.16
NUP88-210ENST00000574867 ARFRP1Q13795 201 aa14.04□□□□□ -0.16
NUP88-210ENST00000574867 MRGPRDQ8TDS7 321 aa14.04□□□□□ -0.16
NUP88-210ENST00000574867 MIXL1Q9H2W2 232 aa14.04□□□□□ -0.16
NUP88-210ENST00000574867 KBTBD11-OT1A0A1B0GTJ5 212 aa14.03□□□□□ -0.16
NUP88-210ENST00000574867 MEX3AA1L020 520 aaKnown RBP14.03□□□□□ -0.16
NUP88-210ENST00000574867 CLPXO76031 633 aa14.03□□□□□ -0.16
NUP88-210ENST00000574867 TAS2R20P59543 309 aa14.03□□□□□ -0.16
NUP88-210ENST00000574867 GNG2P59768 71 aa14.03□□□□□ -0.16
NUP88-210ENST00000574867 CCDC107Q8WV48 283 aa14.03□□□□□ -0.16
NUP88-210ENST00000574867 AUNIPQ9H7T9 357 aa14.03□□□□□ -0.16
NUP88-210ENST00000574867 UNKLQ9H9P5 680 aaKnown RBP14.03□□□□□ -0.16
NUP88-210ENST00000574867 CALYQ9NYX4 217 aa14.03□□□□□ -0.16
NUP88-210ENST00000574867 EXTL2Q9UBQ6 330 aa14.03□□□□□ -0.16
NUP88-210ENST00000574867 TLN2Q9Y4G6 2542 aa14.03□□□□□ -0.16
NUP88-210ENST00000574867 ORC5O43913 435 aa14.03□□□□□ -0.16
NUP88-210ENST00000574867 TPPPO94811 219 aa14.03□□□□□ -0.16
NUP88-210ENST00000574867 MELTFP08582 738 aa14.03□□□□□ -0.16
NUP88-210ENST00000574867 CGB3P0DN86 165 aa14.03□□□□□ -0.16
NUP88-210ENST00000574867 CGB7P0DN87 165 aa14.03□□□□□ -0.16
NUP88-210ENST00000574867 ZNF880Q6PDB4 577 aa14.03□□□□□ -0.16
NUP88-210ENST00000574867 BAIAP2L2Q6UXY1 529 aa14.03□□□□□ -0.16
NUP88-210ENST00000574867 Q8N7P7 452 aa14.03□□□□□ -0.16
NUP88-210ENST00000574867 UPRTQ96BW1 309 aa14.03□□□□□ -0.16
NUP88-210ENST00000574867 HDHD3Q9BSH5 251 aaPredicted RBP14.03□□□□□ -0.16
NUP88-210ENST00000574867 LINC00574Q9H8X3 128 aa14.03□□□□□ -0.16
NUP88-210ENST00000574867 KCNIP1Q9NZI2 227 aa14.03□□□□□ -0.16
NUP88-210ENST00000574867 ERVFRD-1P60508 538 aa14.02□□□□□ -0.16
NUP88-210ENST00000574867 HEPN1Q6WQI6 88 aa14.02□□□□□ -0.16
NUP88-210ENST00000574867 VMO1Q7Z5L0 202 aa14.02□□□□□ -0.16
NUP88-210ENST00000574867 IZUMO1Q8IYV9 350 aa14.02□□□□□ -0.16
NUP88-210ENST00000574867 PCGF1Q9BSM1 259 aa14.02□□□□□ -0.16
NUP88-210ENST00000574867 TRAV39A0A0B4J263 110 aa14.02□□□□□ -0.17
NUP88-210ENST00000574867 FCGR3AP08637 254 aa14.02□□□□□ -0.17
NUP88-210ENST00000574867 RCC1P18754 421 aaPredicted RBP14.02□□□□□ -0.17
NUP88-210ENST00000574867 HNF1AP20823 631 aa14.02□□□□□ -0.17
NUP88-210ENST00000574867 DTYMKP23919 212 aa14.02□□□□□ -0.17
NUP88-210ENST00000574867 PRTN3P24158 256 aa14.02□□□□□ -0.17
NUP88-210ENST00000574867 S100A5P33763 92 aa14.02□□□□□ -0.17
NUP88-210ENST00000574867 SSTR5P35346 364 aa14.02□□□□□ -0.17
NUP88-210ENST00000574867 C17orf58Q2M2W7 97 aa14.02□□□□□ -0.17
NUP88-210ENST00000574867 TMEM30BQ3MIR4 351 aa14.02□□□□□ -0.17
NUP88-210ENST00000574867 NCR3LG1Q68D85 454 aa14.02□□□□□ -0.17
NUP88-210ENST00000574867 CNIH2Q6PI25 160 aa14.02□□□□□ -0.17
NUP88-210ENST00000574867 C11orf42Q8N5U0 333 aa14.02□□□□□ -0.17
NUP88-210ENST00000574867 C15orf40Q8WUR7 153 aa14.02□□□□□ -0.17
NUP88-210ENST00000574867 TBX15Q96SF7 602 aa14.02□□□□□ -0.17
NUP88-210ENST00000574867 GSX1Q9H4S2 264 aaPredicted RBP14.02□□□□□ -0.17
NUP88-210ENST00000574867 RABL2AQ9UBK7 228 aaPredicted RBP14.02□□□□□ -0.17
NUP88-210ENST00000574867 RABL2BQ9UNT1 228 aa14.02□□□□□ -0.17
NUP88-210ENST00000574867 KIAA2026Q5HYC2 2103 aa14.01□□□□□ -0.17
NUP88-210ENST00000574867 NPIPB11E5RHQ5 1161 aa14.01□□□□□ -0.17
NUP88-210ENST00000574867 SPINT2O43291 252 aa14.01□□□□□ -0.17
NUP88-210ENST00000574867 IGHV1-8P0DP01 117 aa14.01□□□□□ -0.17
NUP88-210ENST00000574867 CNPY1Q3B7I2 92 aa14.01□□□□□ -0.17
NUP88-210ENST00000574867 OR10A7Q8NGE5 316 aa14.01□□□□□ -0.17
NUP88-210ENST00000574867 SETD6Q8TBK2 473 aa14.01□□□□□ -0.17
NUP88-210ENST00000574867 NUDCD2Q8WVJ2 157 aa14.01□□□□□ -0.17
NUP88-210ENST00000574867 DIRAS2Q96HU8 199 aa14.01□□□□□ -0.17
NUP88-210ENST00000574867 Q9N2K0 584 aa14.01□□□□□ -0.17
NUP88-210ENST00000574867 ELF5Q9UKW6 265 aaPredicted RBP14.01□□□□□ -0.17
NUP88-210ENST00000574867 SESN1Q9Y6P5 492 aa14.01□□□□□ -0.17
NUP88-210ENST00000574867 C12orf77C9JDV5 145 aa14□□□□□ -0.17
NUP88-210ENST00000574867 SRSF7Q16629 238 aaKnown RBP eCLIP14□□□□□ -0.17
NUP88-210ENST00000574867 FAM120AOSQ5T036 256 aa14□□□□□ -0.17
NUP88-210ENST00000574867 OR52W1Q6IF63 320 aa14□□□□□ -0.17
NUP88-210ENST00000574867 Q6ZPA2 131 aa14□□□□□ -0.17
NUP88-210ENST00000574867 ARL11Q969Q4 196 aa14□□□□□ -0.17
NUP88-210ENST00000574867 TAF9BQ9HBM6 251 aa14□□□□□ -0.17
NUP88-210ENST00000574867 SIRT7Q9NRC8 400 aa14□□□□□ -0.17
NUP88-210ENST00000574867 C15orf65H3BRN8 121 aa14□□□□□ -0.17
NUP88-210ENST00000574867 AVPP01185 164 aa14□□□□□ -0.17
NUP88-210ENST00000574867 HMGN3Q15651 99 aa14□□□□□ -0.17
NUP88-210ENST00000574867 PRAMEF5Q5TYX0 476 aa14□□□□□ -0.17
NUP88-210ENST00000574867 DTX3Q8N9I9 347 aa14□□□□□ -0.17
NUP88-210ENST00000574867 HEXA-AS1Q9H8Q6 139 aa14□□□□□ -0.17
NUP88-210ENST00000574867 IDI2-AS1Q9NZ38 188 aa14□□□□□ -0.17
NUP88-210ENST00000574867 MRPS7Q9Y2R9 242 aaKnown RBP14□□□□□ -0.17
NUP88-210ENST00000574867 HLA-DQB1P01920 261 aa13.99□□□□□ -0.17
NUP88-210ENST00000574867 KIR2DS4P43632 304 aa13.99□□□□□ -0.17
NUP88-210ENST00000574867 CBX5P45973 191 aa13.99□□□□□ -0.17
NUP88-210ENST00000574867 HLA-DRB3P79483 266 aa13.99□□□□□ -0.17
NUP88-210ENST00000574867 GUCA2AQ02747 115 aa13.99□□□□□ -0.17
NUP88-210ENST00000574867 KIR2DS1Q14954 304 aa13.99□□□□□ -0.17
NUP88-210ENST00000574867 Q6ZS49 121 aa13.99□□□□□ -0.17
NUP88-210ENST00000574867 C1orf229Q6ZS94 237 aaPredicted RBP13.99□□□□□ -0.17
NUP88-210ENST00000574867 TNFRSF14Q92956 283 aa13.99□□□□□ -0.17
NUP88-210ENST00000574867 KIRREL1Q96J84 757 aa13.99□□□□□ -0.17
NUP88-210ENST00000574867 HIVEP2P31629 2446 aa13.99□□□□□ -0.17
NUP88-210ENST00000574867 F2RL2O00254 374 aa13.99□□□□□ -0.17
NUP88-210ENST00000574867 SSX5O60225 188 aa13.99□□□□□ -0.17
NUP88-210ENST00000574867 HBZP02008 142 aa13.99□□□□□ -0.17
NUP88-210ENST00000574867 HOXB4P17483 251 aaPredicted RBP13.99□□□□□ -0.17
NUP88-210ENST00000574867 OMGP23515 440 aa13.99□□□□□ -0.17
NUP88-210ENST00000574867 FPR2P25090 351 aa13.99□□□□□ -0.17
NUP88-210ENST00000574867 TNFSF8P32971 234 aa13.99□□□□□ -0.17
NUP88-210ENST00000574867 PRSS3P35030 304 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms